RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 YIPF3Q9GZM5 350 aa1.38□□□□□ -2.19
PMS1-219ENST00000483293 WDR61Q9GZS3 305 aaKnown RBP1.38□□□□□ -2.19
PMS1-219ENST00000483293 C1QAP02745 245 aa1.37□□□□□ -2.19
PMS1-219ENST00000483293 METTL15P1P0C7V9 234 aa1.37□□□□□ -2.19
PMS1-219ENST00000483293 FXYD2P54710 66 aa1.37□□□□□ -2.19
PMS1-219ENST00000483293 CTAG1AP78358 180 aa1.37□□□□□ -2.19
PMS1-219ENST00000483293 HIST2H3PS2Q5TEC6 136 aa1.37□□□□□ -2.19
PMS1-219ENST00000483293 SYPL2Q5VXT5 272 aa1.37□□□□□ -2.19
PMS1-219ENST00000483293 LPCAT4Q643R3 524 aa1.37□□□□□ -2.19
PMS1-219ENST00000483293 BPIFA4PQ86YQ2 179 aa1.37□□□□□ -2.19
PMS1-219ENST00000483293 ODF3Q96PU9 254 aa1.37□□□□□ -2.19
PMS1-219ENST00000483293 TGIF2-C20orf24A0A0A6YYL0 155 aa1.36□□□□□ -2.19
PMS1-219ENST00000483293 TGOLN2O43493 480 aa1.36□□□□□ -2.19
PMS1-219ENST00000483293 ISG15P05161 165 aa1.36□□□□□ -2.19
PMS1-219ENST00000483293 CALB1P05937 261 aa1.36□□□□□ -2.19
PMS1-219ENST00000483293 DCCP43146 1447 aa1.36□□□□□ -2.19
PMS1-219ENST00000483293 PMAIP1Q13794 54 aa1.36□□□□□ -2.19
PMS1-219ENST00000483293 CDK10Q15131 360 aa1.36□□□□□ -2.19
PMS1-219ENST00000483293 C8orf74Q6P047 294 aa1.36□□□□□ -2.19
PMS1-219ENST00000483293 ZNF565Q8N9K5 539 aa1.36□□□□□ -2.19
PMS1-219ENST00000483293 DERL1Q9BUN8 251 aa1.36□□□□□ -2.19
PMS1-219ENST00000483293 C22orf24Q9Y442 160 aa1.36□□□□□ -2.19
PMS1-219ENST00000483293 LSM5Q9Y4Y9 91 aaKnown RBP1.36□□□□□ -2.19
PMS1-219ENST00000483293 IGKV1D-42A0A075B6H8 117 aa1.35□□□□□ -2.19
PMS1-219ENST00000483293 CLPSP04118 112 aa1.35□□□□□ -2.19
PMS1-219ENST00000483293 SHBGP04278 402 aa1.35□□□□□ -2.19
PMS1-219ENST00000483293 PRB3Q04118 309 aaPredicted RBP1.35□□□□□ -2.19
PMS1-219ENST00000483293 ZNF846Q147U1 533 aa1.35□□□□□ -2.19
PMS1-219ENST00000483293 IBA57Q5T440 356 aaKnown RBP1.35□□□□□ -2.19
PMS1-219ENST00000483293 ALKAL1Q6UXT8 129 aa1.35□□□□□ -2.19
PMS1-219ENST00000483293 Q6ZS49 121 aa1.35□□□□□ -2.19
PMS1-219ENST00000483293 C11orf40Q8WZ69 217 aa1.35□□□□□ -2.19
PMS1-219ENST00000483293 TMEM106AQ96A25 262 aa1.35□□□□□ -2.19
PMS1-219ENST00000483293 PTH2Q96A98 100 aa1.35□□□□□ -2.19
PMS1-219ENST00000483293 TP73-AS1Q9UF72 201 aa1.35□□□□□ -2.19
PMS1-219ENST00000483293 EIF4G1Q04637 1599 aaKnown RBP1.34□□□□□ -2.19
PMS1-219ENST00000483293 EML6Q6ZMW3 1958 aa1.34□□□□□ -2.19
PMS1-219ENST00000483293 C9orf84Q5VXU9 1444 aa1.34□□□□□ -2.19
PMS1-219ENST00000483293 A0A1B0GV50 99 aa1.34□□□□□ -2.19
PMS1-219ENST00000483293 EEF1E1-BLOC1S5C9J1V9 151 aa1.34□□□□□ -2.19
PMS1-219ENST00000483293 KRT7P08729 469 aa1.34□□□□□ -2.19
PMS1-219ENST00000483293 ZNF80P51504 273 aaPredicted RBP1.34□□□□□ -2.19
PMS1-219ENST00000483293 DEFA1P59665 94 aa1.34□□□□□ -2.19
PMS1-219ENST00000483293 RAB5BP61020 215 aa1.34□□□□□ -2.19
PMS1-219ENST00000483293 CCL20P78556 96 aa1.34□□□□□ -2.19
PMS1-219ENST00000483293 LCN15Q6UWW0 184 aa1.34□□□□□ -2.19
PMS1-219ENST00000483293 CLVS1Q8IUQ0 354 aaPredicted RBP1.34□□□□□ -2.19
PMS1-219ENST00000483293 MCFD2Q8NI22 146 aa1.34□□□□□ -2.19
PMS1-219ENST00000483293 GINS4Q9BRT9 223 aa1.34□□□□□ -2.19
PMS1-219ENST00000483293 MRPS26Q9BYN8 205 aaKnown RBP1.34□□□□□ -2.19
PMS1-219ENST00000483293 IGKV1-5P01602 117 aa1.33□□□□□ -2.2
PMS1-219ENST00000483293 HIST1H2BOP23527 126 aa1.33□□□□□ -2.2
PMS1-219ENST00000483293 FKBP2P26885 142 aaKnown RBP1.33□□□□□ -2.2
PMS1-219ENST00000483293 HIST1H2BBP33778 126 aa1.33□□□□□ -2.2
PMS1-219ENST00000483293 HIST1H2BDP58876 126 aa1.33□□□□□ -2.2
PMS1-219ENST00000483293 HIST1H2BCP62807 126 aa1.33□□□□□ -2.2
PMS1-219ENST00000483293 HIST2H2BEQ16778 126 aa1.33□□□□□ -2.2
PMS1-219ENST00000483293 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.33□□□□□ -2.2
PMS1-219ENST00000483293 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.33□□□□□ -2.2
PMS1-219ENST00000483293 IQCF2Q8IXL9 164 aa1.33□□□□□ -2.2
PMS1-219ENST00000483293 DNAJC9Q8WXX5 260 aa1.33□□□□□ -2.2
PMS1-219ENST00000483293 AQP3Q92482 292 aa1.33□□□□□ -2.2
PMS1-219ENST00000483293 HIST1H2BHQ93079 126 aa1.33□□□□□ -2.2
PMS1-219ENST00000483293 HIST1H2BNQ99877 126 aa1.33□□□□□ -2.2
PMS1-219ENST00000483293 HIST1H2BMQ99879 126 aa1.33□□□□□ -2.2
PMS1-219ENST00000483293 OR5AC2Q9NZP5 309 aa1.33□□□□□ -2.2
PMS1-219ENST00000483293 PKIGQ9Y2B9 76 aa1.33□□□□□ -2.2
PMS1-219ENST00000483293 SNURFQ9Y675 71 aa1.33□□□□□ -2.2
PMS1-219ENST00000483293 CRYGAP11844 174 aa1.32□□□□□ -2.2
PMS1-219ENST00000483293 RNASE3P12724 160 aaKnown RBP1.32□□□□□ -2.2
PMS1-219ENST00000483293 HBA1P69905 142 aa1.32□□□□□ -2.2
PMS1-219ENST00000483293 LINC00471Q8N535 108 aa1.32□□□□□ -2.2
PMS1-219ENST00000483293 MRPL30Q8TCC3 161 aaKnown RBP1.32□□□□□ -2.2
PMS1-219ENST00000483293 RASSF5Q8WWW0 418 aa1.32□□□□□ -2.2
PMS1-219ENST00000483293 SLC35B4Q969S0 331 aa1.32□□□□□ -2.2
PMS1-219ENST00000483293 OPTNQ96CV9 577 aa1.32□□□□□ -2.2
PMS1-219ENST00000483293 KCNK1O00180 336 aa1.31□□□□□ -2.2
PMS1-219ENST00000483293 GEMIN2O14893 280 aaKnown RBP1.31□□□□□ -2.2
PMS1-219ENST00000483293 DCTN3O75935 186 aa1.31□□□□□ -2.2
PMS1-219ENST00000483293 SPI1P17947 270 aa1.31□□□□□ -2.2
PMS1-219ENST00000483293 IFITM2Q01629 132 aa1.31□□□□□ -2.2
PMS1-219ENST00000483293 SCGB3A1Q96QR1 104 aa1.31□□□□□ -2.2
PMS1-219ENST00000483293 SLC50A1Q9BRV3 221 aa1.31□□□□□ -2.2
PMS1-219ENST00000483293 TRABDQ9H4I3 376 aa1.31□□□□□ -2.2
PMS1-219ENST00000483293 GUCA1BQ9UMX6 200 aa1.31□□□□□ -2.2
PMS1-219ENST00000483293 HECW1Q76N89 1606 aa1.3□□□□□ -2.2
PMS1-219ENST00000483293 OR5F1O95221 314 aa1.3□□□□□ -2.2
PMS1-219ENST00000483293 SPCS3P61009 180 aa1.3□□□□□ -2.2
PMS1-219ENST00000483293 UBE2IP63279 158 aaKnown RBP1.3□□□□□ -2.2
PMS1-219ENST00000483293 STX5Q13190 355 aa1.3□□□□□ -2.2
PMS1-219ENST00000483293 KCNJ8Q15842 424 aa1.3□□□□□ -2.2
PMS1-219ENST00000483293 TEX36Q5VZQ5 186 aa1.3□□□□□ -2.2
PMS1-219ENST00000483293 RPL22L1Q6P5R6 122 aaKnown RBP1.3□□□□□ -2.2
PMS1-219ENST00000483293 TMEM86BQ8N661 226 aa1.3□□□□□ -2.2
PMS1-219ENST00000483293 C12orf29Q8N999 325 aa1.3□□□□□ -2.2
PMS1-219ENST00000483293 C11orf68Q9H3H3 251 aaKnown RBP1.3□□□□□ -2.2
PMS1-219ENST00000483293 CKLFQ9UBR5 152 aa1.3□□□□□ -2.2
PMS1-219ENST00000483293 FADS1O60427 444 aa1.29□□□□□ -2.2
PMS1-219ENST00000483293 SPANXN3Q5MJ09 141 aa1.29□□□□□ -2.2
PMS1-219ENST00000483293 IMP4Q96G21 291 aaKnown RBP1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms