RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 FGF2P09038 288 aa7.86□□□□□ -1.15
CPSF4-212ENST00000482251 ZNF182P17025 639 aaPredicted RBP7.86□□□□□ -1.15
CPSF4-212ENST00000482251 PIGPP57054 158 aa7.86□□□□□ -1.15
CPSF4-212ENST00000482251 SPCS2Q15005 226 aa7.86□□□□□ -1.15
CPSF4-212ENST00000482251 FAAP20Q6NZ36 180 aa7.86□□□□□ -1.15
CPSF4-212ENST00000482251 LPCAT3Q6P1A2 487 aa7.86□□□□□ -1.15
CPSF4-212ENST00000482251 SLC16A13Q7RTY0 426 aa7.86□□□□□ -1.15
CPSF4-212ENST00000482251 H2BFWTQ7Z2G1 175 aa7.86□□□□□ -1.15
CPSF4-212ENST00000482251 HSD17B13Q7Z5P4 300 aaPredicted RBP7.86□□□□□ -1.15
CPSF4-212ENST00000482251 GPR141Q7Z602 305 aa7.86□□□□□ -1.15
CPSF4-212ENST00000482251 OR52B4Q8NGK2 314 aa7.86□□□□□ -1.15
CPSF4-212ENST00000482251 OR5B3Q8NH48 314 aa7.86□□□□□ -1.15
CPSF4-212ENST00000482251 OR4A16Q8NH70 328 aa7.86□□□□□ -1.15
CPSF4-212ENST00000482251 VN1R17PQ8TDU5 208 aa7.86□□□□□ -1.15
CPSF4-212ENST00000482251 SCARB1Q8WTV0 552 aa7.86□□□□□ -1.15
CPSF4-212ENST00000482251 TMEM190Q8WZ59 177 aa7.86□□□□□ -1.15
CPSF4-212ENST00000482251 MISP3Q96FF7 219 aa7.86□□□□□ -1.15
CPSF4-212ENST00000482251 SEC22AQ96IW7 307 aa7.86□□□□□ -1.15
CPSF4-212ENST00000482251 TMEM56Q96MV1 263 aa7.86□□□□□ -1.15
CPSF4-212ENST00000482251 CHRDL1Q9BU40 450 aa7.86□□□□□ -1.15
CPSF4-212ENST00000482251 MRPS26Q9BYN8 205 aaKnown RBP7.86□□□□□ -1.15
CPSF4-212ENST00000482251 TMEM14BQ9NUH8 114 aa7.86□□□□□ -1.15
CPSF4-212ENST00000482251 C21orf62Q9NYP8 219 aa7.86□□□□□ -1.15
CPSF4-212ENST00000482251 F8W735 103 aaPredicted RBP7.85□□□□□ -1.15
CPSF4-212ENST00000482251 AKR1C2P52895 323 aa7.85□□□□□ -1.15
CPSF4-212ENST00000482251 UCP3P55916 312 aa7.85□□□□□ -1.15
CPSF4-212ENST00000482251 SCGB2B2Q4G0G5 96 aa7.85□□□□□ -1.15
CPSF4-212ENST00000482251 RBPMS2Q6ZRY4 209 aaKnown RBP7.85□□□□□ -1.15
CPSF4-212ENST00000482251 PINX1Q96BK5 328 aaKnown RBP7.85□□□□□ -1.15
CPSF4-212ENST00000482251 BSCL2Q96G97 398 aaPredicted RBP7.85□□□□□ -1.15
CPSF4-212ENST00000482251 TP53RKQ96S44 253 aa7.85□□□□□ -1.15
CPSF4-212ENST00000482251 ABHD1Q96SE0 405 aa7.85□□□□□ -1.15
CPSF4-212ENST00000482251 TSC22D3Q99576 134 aa7.85□□□□□ -1.15
CPSF4-212ENST00000482251 ZNF436Q9C0F3 470 aaPredicted RBP7.85□□□□□ -1.15
CPSF4-212ENST00000482251 MIXL1Q9H2W2 232 aa7.85□□□□□ -1.15
CPSF4-212ENST00000482251 HIPK2Q9H2X6 1198 aa7.85□□□□□ -1.15
CPSF4-212ENST00000482251 UBQLN2Q9UHD9 624 aa7.85□□□□□ -1.15
CPSF4-212ENST00000482251 UFC1Q9Y3C8 167 aa7.85□□□□□ -1.15
CPSF4-212ENST00000482251 IGHV3-49A0A0A0MS15 119 aa7.84□□□□□ -1.15
CPSF4-212ENST00000482251 ADMP35318 185 aa7.84□□□□□ -1.15
CPSF4-212ENST00000482251 TRIM16LQ309B1 348 aa7.84□□□□□ -1.15
CPSF4-212ENST00000482251 SP6Q3SY56 376 aa7.84□□□□□ -1.15
CPSF4-212ENST00000482251 LINC00322Q6ZN03 302 aaPredicted RBP7.84□□□□□ -1.15
CPSF4-212ENST00000482251 LHFPL1Q86WI0 220 aa7.84□□□□□ -1.15
CPSF4-212ENST00000482251 CLVS1Q8IUQ0 354 aaPredicted RBP7.84□□□□□ -1.15
CPSF4-212ENST00000482251 OR1L6Q8NGR2 347 aa7.84□□□□□ -1.15
CPSF4-212ENST00000482251 OR13C8Q8NGS7 320 aa7.84□□□□□ -1.15
CPSF4-212ENST00000482251 DAZ1Q9NQZ3 744 aaKnown RBP7.84□□□□□ -1.15
CPSF4-212ENST00000482251 FKBP11Q9NYL4 201 aa7.84□□□□□ -1.15
CPSF4-212ENST00000482251 MTFP1Q9UDX5 166 aa7.84□□□□□ -1.15
CPSF4-212ENST00000482251 STARD9Q9P2P6 4700 aa7.84□□□□□ -1.15
CPSF4-212ENST00000482251 DYNC2H1Q8NCM8 4307 aaKnown RBP7.83□□□□□ -1.16
CPSF4-212ENST00000482251 CTDSP2O14595 271 aa7.83□□□□□ -1.16
CPSF4-212ENST00000482251 RAB3DO95716 219 aa7.83□□□□□ -1.16
CPSF4-212ENST00000482251 IGKV1-5P01602 117 aa7.83□□□□□ -1.16
CPSF4-212ENST00000482251 C8orf88P0DMB2 117 aa7.83□□□□□ -1.16
CPSF4-212ENST00000482251 ALDH3B2P48448 385 aa7.83□□□□□ -1.16
CPSF4-212ENST00000482251 TAS2R19P59542 299 aa7.83□□□□□ -1.16
CPSF4-212ENST00000482251 RND3P61587 244 aa7.83□□□□□ -1.16
CPSF4-212ENST00000482251 PRCDQ00LT1 54 aa7.83□□□□□ -1.16
CPSF4-212ENST00000482251 ARRDC1Q8N5I2 433 aa7.83□□□□□ -1.16
CPSF4-212ENST00000482251 OR2C3Q8N628 320 aa7.83□□□□□ -1.16
CPSF4-212ENST00000482251 SLC35G3Q8N808 338 aa7.83□□□□□ -1.16
CPSF4-212ENST00000482251 OR1P1Q8NH06 330 aa7.83□□□□□ -1.16
CPSF4-212ENST00000482251 RNASE11Q8TAA1 199 aaKnown RBP7.83□□□□□ -1.16
CPSF4-212ENST00000482251 MARCH1Q8TCQ1 289 aa7.83□□□□□ -1.16
CPSF4-212ENST00000482251 MARC2Q969Z3 335 aa7.83□□□□□ -1.16
CPSF4-212ENST00000482251 FAM212BQ9NTI7 297 aaPredicted RBP7.83□□□□□ -1.16
CPSF4-212ENST00000482251 MRPL27Q9P0M9 148 aaKnown RBP7.83□□□□□ -1.16
CPSF4-212ENST00000482251 COPZ2Q9P299 210 aa7.83□□□□□ -1.16
CPSF4-212ENST00000482251 IGHV3OR16-13A0A075B7E8 117 aa7.82□□□□□ -1.16
CPSF4-212ENST00000482251 IGHV3-74A0A0B4J1X5 117 aa7.82□□□□□ -1.16
CPSF4-212ENST00000482251 A0A0G2JRQ6 117 aa7.82□□□□□ -1.16
CPSF4-212ENST00000482251 C3orf85A0A1B0GTC6 90 aa7.82□□□□□ -1.16
CPSF4-212ENST00000482251 I3L2K1 104 aa7.82□□□□□ -1.16
CPSF4-212ENST00000482251 NDUFA4O00483 81 aa7.82□□□□□ -1.16
CPSF4-212ENST00000482251 YIF1AO95070 293 aa7.82□□□□□ -1.16
CPSF4-212ENST00000482251 MT-CO2P00403 227 aa7.82□□□□□ -1.16
CPSF4-212ENST00000482251 TBPP20226 339 aa7.82□□□□□ -1.16
CPSF4-212ENST00000482251 HOXA1P49639 335 aaPredicted RBP7.82□□□□□ -1.16
CPSF4-212ENST00000482251 ELLP55199 621 aaPredicted RBP7.82□□□□□ -1.16
CPSF4-212ENST00000482251 IL18Q14116 193 aa7.82□□□□□ -1.16
CPSF4-212ENST00000482251 STEAP1BQ6NZ63 245 aa7.82□□□□□ -1.16
CPSF4-212ENST00000482251 SPSB3Q6PJ21 355 aa7.82□□□□□ -1.16
CPSF4-212ENST00000482251 TMEM229BQ8NBD8 167 aa7.82□□□□□ -1.16
CPSF4-212ENST00000482251 ZNF486Q96H40 463 aaPredicted RBP7.82□□□□□ -1.16
CPSF4-212ENST00000482251 ZNF414Q96IQ9 312 aa7.82□□□□□ -1.16
CPSF4-212ENST00000482251 GGTLC1Q9BX51 225 aa7.82□□□□□ -1.16
CPSF4-212ENST00000482251 IGKV3-7A0A075B6H7 116 aa7.81□□□□□ -1.16
CPSF4-212ENST00000482251 GABARAPH6UMI1 98 aa7.81□□□□□ -1.16
CPSF4-212ENST00000482251 NUPL2O15504 423 aaKnown RBP7.81□□□□□ -1.16
CPSF4-212ENST00000482251 ST8SIA3O43173 380 aa7.81□□□□□ -1.16
CPSF4-212ENST00000482251 IFNA17P01571 189 aa7.81□□□□□ -1.16
CPSF4-212ENST00000482251 CD74P04233 296 aa7.81□□□□□ -1.16
CPSF4-212ENST00000482251 CTSGP08311 255 aa7.81□□□□□ -1.16
CPSF4-212ENST00000482251 TFPI2P48307 235 aa7.81□□□□□ -1.16
CPSF4-212ENST00000482251 HSPE1P61604 102 aaKnown RBP7.81□□□□□ -1.16
CPSF4-212ENST00000482251 ANKRD55Q3KP44 614 aa7.81□□□□□ -1.16
CPSF4-212ENST00000482251 CADM3Q8N126 398 aa7.81□□□□□ -1.16
CPSF4-212ENST00000482251 CCDC71LQ8N9Z2 235 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms