RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 EFCAB11Q9BUY7 163 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 CISHQ9NSE2 258 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 MRPL27Q9P0M9 148 aaKnown RBP2.19□□□□□ -2.06
SF3B1-210ENST00000482158 WNK3Q9BYP7 1800 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 AKAP12Q02952 1782 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 SMG6Q86US8 1419 aaKnown RBP2.18□□□□□ -2.06
SF3B1-210ENST00000482158 MIA2Q96PC5 1412 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 A0A087WX48 190 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 FAM25AB3EWG3 89 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 FAM25CB3EWG5 89 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 FAM25GB3EWG6 89 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 SOD1P00441 154 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 IGF2P01344 180 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 ATP5G1P05496 136 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 OR4A8P0C604 315 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 CPMP14384 443 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 ORM2P19652 201 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 AGTR1P30556 359 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 MARCKSL1P49006 195 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 LINC00313P59037 77 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 GNG2P59768 71 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 C1orf194Q5T5A4 169 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 OR4D11Q8NGI4 311 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 OR4C16Q8NGL9 310 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 BORCS7Q96B45 105 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 ACY3Q96HD9 319 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 C14orf144Q96I85 54 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 OR52E6Q96RD3 313 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 RNASE7Q9H1E1 156 aaKnown RBP2.18□□□□□ -2.06
SF3B1-210ENST00000482158 C14orf105Q9NVL8 296 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 COPZ2Q9P299 210 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 GLS2Q9UI32 602 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 LINC00527Q9UJ94 153 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 PRNDQ9UKY0 176 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 HDGFL3Q9Y3E1 203 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 MINOS1-NBL1R4GNA1 71 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 KIF15Q9NS87 1388 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 DENND4BO75064 1496 aaPredicted RBP2.18□□□□□ -2.06
SF3B1-210ENST00000482158 REREQ9P2R6 1566 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 UBR2Q8IWV8 1755 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 NUP210Q8TEM1 1887 aaPredicted RBP2.18□□□□□ -2.06
SF3B1-210ENST00000482158 MPDZO75970 2070 aa2.18□□□□□ -2.06
SF3B1-210ENST00000482158 OVOS2A0A0J9YW53 1432 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 FAM135BQ49AJ0 1406 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 OVOS2Q6IE36 1432 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 FGD6Q6ZV73 1430 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 VPS8Q8N3P4 1428 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 ERBINQ96RT1 1412 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 NISCHQ9Y2I1 1504 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 AKAP11Q9UKA4 1901 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 PLXND1Q9Y4D7 1925 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 UQCRHLA0A096LP55 91 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 A0A1B0GVG6 124 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 hADV38S2A0JD32 116 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 C19orf71A6NCJ1 209 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 ARL5CA6NH57 179 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 E7EQ34 232 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 ARL6IP5O75915 188 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 UQCRHP07919 91 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 ZNF25P17030 456 aaPredicted RBP2.17□□□□□ -2.06
SF3B1-210ENST00000482158 CDK2P24941 298 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 DEFB103AP81534 67 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 ZNF117Q03924 483 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 PRDX4Q13162 271 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 C1DQ13901 141 aaKnown RBP2.17□□□□□ -2.06
SF3B1-210ENST00000482158 SS18Q15532 418 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 GRK1Q15835 563 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 IAH1Q2TAA2 248 aaPredicted RBP2.17□□□□□ -2.06
SF3B1-210ENST00000482158 PCOTHQ58A44 107 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 GOLT1AQ6ZVE7 132 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 ZNF767PQ75MW2 155 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 OOSP2Q86WS3 158 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 FAM24BQ8N5W8 94 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 DEFB125Q8N687 156 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 CCDC115Q96NT0 180 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 GPER1Q99527 375 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 KLF6Q99612 283 aaPredicted RBP2.17□□□□□ -2.06
SF3B1-210ENST00000482158 HSPB9Q9BQS6 159 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 GNB1LQ9BYB4 327 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 SH3BGRL3Q9H299 93 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 OR51I2Q9H344 312 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 SMDT1Q9H4I9 107 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 LYRM2Q9NU23 88 aaPredicted RBP2.17□□□□□ -2.06
SF3B1-210ENST00000482158 TMEM106BQ9NUM4 274 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 MED29Q9NX70 200 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 RBM7Q9Y580 266 aaKnown RBP2.17□□□□□ -2.06
SF3B1-210ENST00000482158 TTC37Q6PGP7 1564 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 SBF1O95248 1867 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 HECW1Q76N89 1606 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 BCL9O00512 1426 aa2.17□□□□□ -2.06
SF3B1-210ENST00000482158 CDK5RAP2Q96SN8 1893 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 UHRF1BP1LA0JNW5 1464 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 RAPGEF2Q9Y4G8 1499 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 A0A096LPI6 279 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 A0A0J9YX75 114 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 PVALEFA0A1B0GWK0 134 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 TRAPPC13A5PLN9 417 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 G3V2T6 193 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 DEGS1O15121 323 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 TPST1O60507 370 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms