RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 DCUN1D4Q92564 292 aa8.13□□□□□ -1.11
SSBP1-210ENST00000481508 DLX4Q92988 240 aaPredicted RBP8.13□□□□□ -1.11
SSBP1-210ENST00000481508 RBPMSQ93062 196 aaKnown RBP8.13□□□□□ -1.11
SSBP1-210ENST00000481508 TMEM56Q96MV1 263 aa8.13□□□□□ -1.11
SSBP1-210ENST00000481508 SCGB3A2Q96PL1 93 aa8.13□□□□□ -1.11
SSBP1-210ENST00000481508 SLC25A21Q9BQT8 299 aaPredicted RBP8.13□□□□□ -1.11
SSBP1-210ENST00000481508 FBXL7Q9UJT9 491 aa8.13□□□□□ -1.11
SSBP1-210ENST00000481508 TBC1D24Q9ULP9 559 aa8.13□□□□□ -1.11
SSBP1-210ENST00000481508 TMEM56-RWDD3S4R434 201 aa8.13□□□□□ -1.11
SSBP1-210ENST00000481508 NAP1L6A6NFF2 107 aa8.12□□□□□ -1.11
SSBP1-210ENST00000481508 MFSD2BA6NFX1 497 aa8.12□□□□□ -1.11
SSBP1-210ENST00000481508 A6NJY4 79 aa8.12□□□□□ -1.11
SSBP1-210ENST00000481508 FAM223BA6NKX1 122 aa8.12□□□□□ -1.11
SSBP1-210ENST00000481508 LINC01619G3V211 115 aa8.12□□□□□ -1.11
SSBP1-210ENST00000481508 LYRM1O43325 122 aa8.12□□□□□ -1.11
SSBP1-210ENST00000481508 B3GALNT1O75752 331 aa8.12□□□□□ -1.11
SSBP1-210ENST00000481508 NXPH3O95157 252 aa8.12□□□□□ -1.11
SSBP1-210ENST00000481508 SFT2D2O95562 160 aa8.12□□□□□ -1.11
SSBP1-210ENST00000481508 PRCDQ00LT1 54 aa8.12□□□□□ -1.11
SSBP1-210ENST00000481508 RBMS2Q15434 407 aaKnown RBP8.12□□□□□ -1.11
SSBP1-210ENST00000481508 C15orf32Q32M92 178 aa8.12□□□□□ -1.11
SSBP1-210ENST00000481508 KPRPQ5T749 579 aaPredicted RBP8.12□□□□□ -1.11
SSBP1-210ENST00000481508 LINC00299Q6ZSB3 139 aa8.12□□□□□ -1.11
SSBP1-210ENST00000481508 LYZL2Q7Z4W2 148 aa8.12□□□□□ -1.11
SSBP1-210ENST00000481508 SLC25A42Q86VD7 318 aa8.12□□□□□ -1.11
SSBP1-210ENST00000481508 FAM223AQ8IWN6 122 aa8.12□□□□□ -1.11
SSBP1-210ENST00000481508 LSM10Q969L4 123 aaKnown RBP8.12□□□□□ -1.11
SSBP1-210ENST00000481508 CCDC140Q96MF4 163 aa8.12□□□□□ -1.11
SSBP1-210ENST00000481508 TSC22D3Q99576 134 aa8.12□□□□□ -1.11
SSBP1-210ENST00000481508 SRSF8Q9BRL6 282 aaKnown RBP8.12□□□□□ -1.11
SSBP1-210ENST00000481508 CCDC32Q9BV29 185 aa8.12□□□□□ -1.11
SSBP1-210ENST00000481508 CACNG5Q9UF02 275 aa8.12□□□□□ -1.11
SSBP1-210ENST00000481508 IGHV3-21A0A0B4J1V1 117 aa8.11□□□□□ -1.11
SSBP1-210ENST00000481508 A0A0G2JLM5 398 aa8.11□□□□□ -1.11
SSBP1-210ENST00000481508 PPP5D1E7EU14 171 aa8.11□□□□□ -1.11
SSBP1-210ENST00000481508 BMPR1BO00238 502 aa8.11□□□□□ -1.11
SSBP1-210ENST00000481508 HSPB1P04792 205 aaKnown RBP8.11□□□□□ -1.11
SSBP1-210ENST00000481508 OR8U8P0C7N1 319 aa8.11□□□□□ -1.11
SSBP1-210ENST00000481508 ANXA7P20073 488 aaKnown RBP8.11□□□□□ -1.11
SSBP1-210ENST00000481508 VAMP1P23763 118 aa8.11□□□□□ -1.11
SSBP1-210ENST00000481508 HOXD3P31249 432 aaPredicted RBP8.11□□□□□ -1.11
SSBP1-210ENST00000481508 MECP2P51608 486 aaKnown RBP8.11□□□□□ -1.11
SSBP1-210ENST00000481508 KRTAP10-11P60412 298 aa8.11□□□□□ -1.11
SSBP1-210ENST00000481508 HSPE1P61604 102 aaKnown RBP8.11□□□□□ -1.11
SSBP1-210ENST00000481508 ATP5G2Q06055 141 aa8.11□□□□□ -1.11
SSBP1-210ENST00000481508 NMSQ5H8A3 153 aa8.11□□□□□ -1.11
SSBP1-210ENST00000481508 ZNF429Q86V71 674 aa8.11□□□□□ -1.11
SSBP1-210ENST00000481508 CENPSQ8N2Z9 138 aa8.11□□□□□ -1.11
SSBP1-210ENST00000481508 OR2C3Q8N628 320 aa8.11□□□□□ -1.11
SSBP1-210ENST00000481508 NECAP1Q8NC96 275 aa8.11□□□□□ -1.11
SSBP1-210ENST00000481508 RNASE11Q8TAA1 199 aaKnown RBP8.11□□□□□ -1.11
SSBP1-210ENST00000481508 S100ZQ8WXG8 99 aa8.11□□□□□ -1.11
SSBP1-210ENST00000481508 DPF1Q92782 380 aa8.11□□□□□ -1.11
SSBP1-210ENST00000481508 IL22RA2Q969J5 263 aa8.11□□□□□ -1.11
SSBP1-210ENST00000481508 RCC1LQ96I51 464 aaKnown RBP8.11□□□□□ -1.11
SSBP1-210ENST00000481508 USMG5Q96IX5 58 aa8.11□□□□□ -1.11
SSBP1-210ENST00000481508 C7orf50Q9BRJ6 194 aaKnown RBP8.11□□□□□ -1.11
SSBP1-210ENST00000481508 F11RQ9Y624 299 aaKnown RBP8.11□□□□□ -1.11
SSBP1-210ENST00000481508 HYDINQ4G0P3 5121 aa8.11□□□□□ -1.11
SSBP1-210ENST00000481508 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.1□□□□□ -1.11
SSBP1-210ENST00000481508 UPK1BO75841 260 aa8.1□□□□□ -1.11
SSBP1-210ENST00000481508 HLA-AP01891 365 aaKnown RBP8.1□□□□□ -1.11
SSBP1-210ENST00000481508 EDN2P20800 178 aa8.1□□□□□ -1.11
SSBP1-210ENST00000481508 ZNF846Q147U1 533 aa8.1□□□□□ -1.11
SSBP1-210ENST00000481508 AARDQ4LEZ3 155 aa8.1□□□□□ -1.11
SSBP1-210ENST00000481508 TMEM128Q5BJH2 165 aa8.1□□□□□ -1.11
SSBP1-210ENST00000481508 THOC7Q6I9Y2 204 aaKnown RBP8.1□□□□□ -1.11
SSBP1-210ENST00000481508 OR52B4Q8NGK2 314 aa8.1□□□□□ -1.11
SSBP1-210ENST00000481508 RRNAD1Q96FB5 475 aaKnown RBP8.1□□□□□ -1.11
SSBP1-210ENST00000481508 ZNF414Q96IQ9 312 aa8.1□□□□□ -1.11
SSBP1-210ENST00000481508 WDR12Q9GZL7 423 aaKnown RBP8.1□□□□□ -1.11
SSBP1-210ENST00000481508 ZC4H2Q9NQZ6 224 aa8.1□□□□□ -1.11
SSBP1-210ENST00000481508 FKBP11Q9NYL4 201 aa8.1□□□□□ -1.11
SSBP1-210ENST00000481508 PEF1Q9UBV8 284 aaKnown RBP8.1□□□□□ -1.11
SSBP1-210ENST00000481508 KCNIP3Q9Y2W7 256 aa8.1□□□□□ -1.11
SSBP1-210ENST00000481508 TENM2Q9NT68 2774 aa8.09□□□□□ -1.11
SSBP1-210ENST00000481508 A0A0B4J2A0 478 aa8.09□□□□□ -1.11
SSBP1-210ENST00000481508 C9orf170A2RU37 121 aa8.09□□□□□ -1.11
SSBP1-210ENST00000481508 F8W735 103 aaPredicted RBP8.09□□□□□ -1.11
SSBP1-210ENST00000481508 K7EIM0 57 aa8.09□□□□□ -1.11
SSBP1-210ENST00000481508 OVOL1O14753 267 aa8.09□□□□□ -1.11
SSBP1-210ENST00000481508 ATG12O94817 140 aa8.09□□□□□ -1.11
SSBP1-210ENST00000481508 DEFA4P12838 97 aa8.09□□□□□ -1.11
SSBP1-210ENST00000481508 HIST1H1BP16401 226 aaKnown RBP8.09□□□□□ -1.11
SSBP1-210ENST00000481508 UBE2MP61081 183 aaKnown RBP8.09□□□□□ -1.11
SSBP1-210ENST00000481508 SLC25A24Q6NUK1 477 aa8.09□□□□□ -1.11
SSBP1-210ENST00000481508 CLEC19AQ6UXS0 136 aa8.09□□□□□ -1.11
SSBP1-210ENST00000481508 HAPLN4Q86UW8 402 aa8.09□□□□□ -1.11
SSBP1-210ENST00000481508 FAM219AQ8IW50 185 aa8.09□□□□□ -1.11
SSBP1-210ENST00000481508 LGI3Q8N145 548 aa8.09□□□□□ -1.11
SSBP1-210ENST00000481508 C20orf85Q9H1P6 137 aa8.09□□□□□ -1.11
SSBP1-210ENST00000481508 PLEKHA3Q9HB20 300 aa8.09□□□□□ -1.11
SSBP1-210ENST00000481508 SHPKQ9UHJ6 478 aa8.09□□□□□ -1.11
SSBP1-210ENST00000481508 DNAH9Q9NYC9 4486 aa8.09□□□□□ -1.12
SSBP1-210ENST00000481508 CENPXA8MT69 81 aa8.08□□□□□ -1.12
SSBP1-210ENST00000481508 SEC14L6B5MCN3 397 aa8.08□□□□□ -1.12
SSBP1-210ENST00000481508 ADAP1O75689 374 aa8.08□□□□□ -1.12
SSBP1-210ENST00000481508 IFNA17P01571 189 aa8.08□□□□□ -1.12
SSBP1-210ENST00000481508 IGHV3-48P01763 117 aa8.08□□□□□ -1.12
SSBP1-210ENST00000481508 TCRBP04435 133 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms