RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 RNASEH2CQ8TDP1 164 aaKnown RBP8.14□□□□□ -1.11
VEGFA-212ENST00000480614 BEX4Q9NWD9 120 aaPredicted RBP8.14□□□□□ -1.11
VEGFA-212ENST00000480614 NRXN2Q9P2S2 1712 aa8.14□□□□□ -1.11
VEGFA-212ENST00000480614 ZPLD1Q8TCW7 415 aa8.14□□□□□ -1.11
VEGFA-212ENST00000480614 NPCDR1Q9BY65 106 aa8.14□□□□□ -1.11
VEGFA-212ENST00000480614 RTN4RQ9BZR6 473 aa8.14□□□□□ -1.11
VEGFA-212ENST00000480614 RPP21Q9H633 154 aaKnown RBP8.14□□□□□ -1.11
VEGFA-212ENST00000480614 FOXI3A8MTJ6 420 aaPredicted RBP8.14□□□□□ -1.11
VEGFA-212ENST00000480614 LINC00305Q7Z4B0 112 aa8.14□□□□□ -1.11
VEGFA-212ENST00000480614 OR2K2Q8NGT1 345 aa8.14□□□□□ -1.11
VEGFA-212ENST00000480614 GPR146Q96CH1 333 aa8.14□□□□□ -1.11
VEGFA-212ENST00000480614 A0A0G2JMZ2 1700 aa8.14□□□□□ -1.11
VEGFA-212ENST00000480614 LRRC37A2A6NM11 1700 aa8.14□□□□□ -1.11
VEGFA-212ENST00000480614 IGKV1D-16P01601 117 aa8.14□□□□□ -1.11
VEGFA-212ENST00000480614 AKIRIN1Q9H9L7 192 aaPredicted RBP8.14□□□□□ -1.11
VEGFA-212ENST00000480614 IGHV3-72A0A0B4J1Y9 119 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 CYP2G1PQ6ZSU1 146 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 OR11H4Q8NGC9 324 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 DTX2Q86UW9 622 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 SCGB3A1Q96QR1 104 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 TMEM160Q9NX00 188 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 PRR19A6NJB7 356 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 POC1AQ8NBT0 407 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 IGLV1-36A0A0B4J1U3 117 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 ORMDL3Q8N138 153 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 SDHCQ99643 169 aaPredicted RBP8.13□□□□□ -1.11
VEGFA-212ENST00000480614 TLNRD1Q9H1K6 362 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 DPRXA6NFQ7 191 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 RRHO14718 337 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 PNKDQ8N490 385 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 PEMTQ9UBM1 199 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 ATXN7O15265 892 aaPredicted RBP8.13□□□□□ -1.11
VEGFA-212ENST00000480614 FAM181AQ8N9Y4 354 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 DUX3Q96PT4 197 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 TMEM74BQ9NUR3 256 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 PCDH15Q96QU1 1955 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 ZNF883P0CG24 379 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 IGKV3OR2-268A0A0C4DH90 116 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 LINC01549A6NIU2 74 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 APOBEC3AP31941 199 aaPredicted RBP8.13□□□□□ -1.11
VEGFA-212ENST00000480614 IFITM3Q01628 133 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 FAM57AQ8TBR7 257 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 A0A1W2PQF6 199 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 LEPP41159 167 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 SNAI3Q3KNW1 292 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 Q6ZT83 130 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 PHLDA1Q8WV24 401 aaPredicted RBP8.13□□□□□ -1.11
VEGFA-212ENST00000480614 OR5P3Q8WZ94 311 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 NPFFR1Q9GZQ6 430 aa8.13□□□□□ -1.11
VEGFA-212ENST00000480614 IFITM2Q01629 132 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 SP7Q8TDD2 431 aaPredicted RBP8.12□□□□□ -1.11
VEGFA-212ENST00000480614 MBD3L1Q8WWY6 194 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 PILRAQ9UKJ1 303 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 TRBV7-9A0A0J9YWB2 115 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 CD160O95971 181 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 CRYBB3P26998 211 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 DPM3Q9P2X0 92 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 IL6RP08887 468 aaPredicted RBP8.12□□□□□ -1.11
VEGFA-212ENST00000480614 RND3P61587 244 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 CD69Q07108 199 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 ACP7Q6ZNF0 438 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 APCDD1LQ8NCL9 501 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 IGKV1-8A0A0C4DH67 115 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 A0A1W2PP11 408 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 COX6A1P12074 109 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 CMC4P56277 68 aaPredicted RBP8.12□□□□□ -1.11
VEGFA-212ENST00000480614 TMEM187Q14656 261 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 BIVMQ86UB2 503 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 SCARF2Q96GP6 870 aaPredicted RBP8.12□□□□□ -1.11
VEGFA-212ENST00000480614 REG1AP05451 166 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 RNF182Q8N6D2 247 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 C21orf62Q9NYP8 219 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 DTX4Q9Y2E6 619 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 ZIC4Q8N9L1 334 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 OR4X2Q8NGF9 303 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 RCC1LQ96I51 464 aaKnown RBP8.12□□□□□ -1.11
VEGFA-212ENST00000480614 ZNF826PQ6ZT77 177 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 VKORC1L1Q8N0U8 176 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 IFI27L2Q9H2X8 130 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 HAX1O00165 279 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 F8P00451 2351 aa8.12□□□□□ -1.11
VEGFA-212ENST00000480614 NKX2-8O15522 239 aa8.11□□□□□ -1.11
VEGFA-212ENST00000480614 PPBPP02775 128 aa8.11□□□□□ -1.11
VEGFA-212ENST00000480614 ZNF688P0C7X2 276 aa8.11□□□□□ -1.11
VEGFA-212ENST00000480614 TPRX1Q8N7U7 411 aa8.11□□□□□ -1.11
VEGFA-212ENST00000480614 KCNS1Q96KK3 526 aa8.11□□□□□ -1.11
VEGFA-212ENST00000480614 NOTCH4Q99466 2003 aa8.11□□□□□ -1.11
VEGFA-212ENST00000480614 CD8AP01732 235 aa8.11□□□□□ -1.11
VEGFA-212ENST00000480614 SLC22A18ASQ8N1D0 253 aa8.11□□□□□ -1.11
VEGFA-212ENST00000480614 CLDN16Q9Y5I7 305 aa8.11□□□□□ -1.11
VEGFA-212ENST00000480614 MOSP00540 346 aa8.11□□□□□ -1.11
VEGFA-212ENST00000480614 TTC9CQ8N5M4 171 aa8.11□□□□□ -1.11
VEGFA-212ENST00000480614 FN1P02751 2386 aaKnown RBP8.11□□□□□ -1.11
VEGFA-212ENST00000480614 H0YL77 283 aa8.11□□□□□ -1.11
VEGFA-212ENST00000480614 C1QL1O75973 258 aa8.11□□□□□ -1.11
VEGFA-212ENST00000480614 MALP21145 153 aa8.11□□□□□ -1.11
VEGFA-212ENST00000480614 MRPL52Q86TS9 123 aaKnown RBP8.11□□□□□ -1.11
VEGFA-212ENST00000480614 PLAC1Q9HBJ0 212 aa8.11□□□□□ -1.11
VEGFA-212ENST00000480614 PILRBQ9UKJ0 227 aa8.11□□□□□ -1.11
VEGFA-212ENST00000480614 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms