RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 BCL2L15Q5TBC7 163 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 TMEM244Q5VVB8 128 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 STUMQ69YW2 141 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 SLC36A1Q7Z2H8 476 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 WDR86Q86TI4 376 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 ACBD7Q8N6N7 88 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 OR51G1Q8NGK1 321 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 LYPD6BQ8NI32 183 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 OR51E1Q8TCB6 317 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 LRRC29Q8WV35 223 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 PP6455Q8WZ26 134 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 IL22RA2Q969J5 263 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 RNF170Q96K19 258 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 APOL4Q9BPW4 351 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 HDHD3Q9BSH5 251 aaPredicted RBP3.49□□□□□ -1.85
UPF3A-205ENST00000479712 OR51I2Q9H344 312 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 RHOFQ9HBH0 211 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 GPR84Q9NQS5 396 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 MTCH1Q9NZJ7 389 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 DNAJC27Q9NZQ0 273 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 CCDC59Q9P031 241 aaKnown RBP3.49□□□□□ -1.85
UPF3A-205ENST00000479712 OR52A1Q9UKL2 312 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 KPTNQ9Y664 436 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 HSPE1-MOB4S4R3N1 261 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 TRAV25A0A0B4J276 109 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 KBTBD11-OT1A0A1B0GTJ5 212 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 LOC100130705A0A1B0GUX0 176 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 PQLC2LA1A4F0 135 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 ZNF850A8MQ14 1090 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 ZNF879B4DU55 563 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 M0R129 80 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 CDIPTO14735 213 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 RTL8CO15255 209 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 ENTPD6O75354 484 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 PGA5P0DJD9 388 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 HCCSP53701 268 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 SMIM21Q3B7S5 101 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 CCDC58Q4VC31 144 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 FAM201AQ5SY85 155 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 LYPD2Q6UXB3 125 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 ZNF826PQ6ZT77 177 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 ZNF429Q86V71 674 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 Q8IYB0 196 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 ENTHD1Q8IYW4 607 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 ZNF645Q8N7E2 425 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 YIPF7Q8N8F6 280 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 LY6G5BQ8NDX9 201 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 ZNF555Q8NEP9 628 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 ANGPTL6Q8NI99 470 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 AQP3Q92482 292 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 RORBQ92753 470 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 FAM3DQ96BQ1 224 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 CHST5Q9GZS9 411 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 FGF23Q9GZV9 251 aaPredicted RBP3.48□□□□□ -1.85
UPF3A-205ENST00000479712 HES4Q9HCC6 221 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 ANAPC11Q9NYG5 84 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 ZNF222Q9UK12 451 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 SLC7A11Q9UPY5 501 aa3.48□□□□□ -1.85
UPF3A-205ENST00000479712 LOC107986453A0A1B0GWG9 222 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 DAPL1A0PJW8 107 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 TMEM212A6NML5 194 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 OR4C45A6NMZ5 311 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 OR2AT4A6NND4 320 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 LYRM9A8MSI8 78 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 H0YJX3 145 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 M0R1W7 72 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 NDUFB3O43676 98 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 GYPAP02724 150 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 HTR1AP08908 422 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 PIPP12273 146 aaPredicted RBP3.47□□□□□ -1.85
UPF3A-205ENST00000479712 MGMTP16455 207 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 PRKACBP22694 351 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 CNTFRP26992 372 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 RPS10P46783 165 aaKnown RBP3.47□□□□□ -1.85
UPF3A-205ENST00000479712 FGF12P61328 243 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 MED21Q13503 144 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 TMEM183BQ1AE95 376 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 OGFRL1Q5TC84 451 aaPredicted RBP3.47□□□□□ -1.85
UPF3A-205ENST00000479712 Q5VSD8 79 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 PLCXD3Q63HM9 321 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 ZNF493Q6ZR52 646 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 SSX6Q7RTT6 188 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 CALHM1Q8IU99 346 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 TMEM183AQ8IXX5 376 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 SAXO1Q8IYX7 474 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 ZNF561Q8N587 486 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 MARCH1Q8TCQ1 289 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 RPS4Y2Q8TD47 263 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 CD300LFQ8TDQ1 290 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 CPNE2Q96FN4 548 aaPredicted RBP3.47□□□□□ -1.85
UPF3A-205ENST00000479712 RNF185Q96GF1 192 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 GAFA1Q96PS6 74 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 ZNF649Q9BS31 505 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 ACTR3CQ9C0K3 210 aaPredicted RBP3.47□□□□□ -1.85
UPF3A-205ENST00000479712 PLEKHA1Q9HB21 404 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 RETNQ9HD89 108 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 ABCB10Q9NRK6 738 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 GNG8Q9UK08 70 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 HHLA2Q9UM44 414 aa3.47□□□□□ -1.85
UPF3A-205ENST00000479712 IGKV1D-17A0A075B6S4 117 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms