RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-211	ENST00000476994	SOX15	O60248	233 aa		13.79	□□□□□ -0.2
SREBF1-211	ENST00000476994	TMEM50A	O95807	157 aa		13.79	□□□□□ -0.2
SREBF1-211	ENST00000476994	CRYGC	P07315	174 aa		13.79	□□□□□ -0.2
SREBF1-211	ENST00000476994	APELA	P0DMC3	54 aa		13.79	□□□□□ -0.2
SREBF1-211	ENST00000476994	CHRNA7	P36544	502 aa		13.79	□□□□□ -0.2
SREBF1-211	ENST00000476994	PAX9	P55771	341 aa		13.79	□□□□□ -0.2
SREBF1-211	ENST00000476994	CYCS	P99999	105 aa	Known RBP	13.79	□□□□□ -0.2
SREBF1-211	ENST00000476994	ECSCR	Q19T08	205 aa		13.79	□□□□□ -0.2
SREBF1-211	ENST00000476994	KLK9	Q2XQG4	91 aa		13.79	□□□□□ -0.2
SREBF1-211	ENST00000476994	C19orf35	Q6ZS72	473 aa		13.79	□□□□□ -0.2
SREBF1-211	ENST00000476994	TTC9C	Q8N5M4	171 aa		13.79	□□□□□ -0.2
SREBF1-211	ENST00000476994	ABHD5	Q8WTS1	349 aa		13.79	□□□□□ -0.2
SREBF1-211	ENST00000476994	TMEM170A	Q8WVE7	144 aa		13.79	□□□□□ -0.2
SREBF1-211	ENST00000476994	PPP1R1C	Q8WVI7	109 aa		13.79	□□□□□ -0.2
SREBF1-211	ENST00000476994	ASB13	Q8WXK3	278 aa		13.79	□□□□□ -0.2
SREBF1-211	ENST00000476994	HINT2	Q9BX68	163 aa		13.79	□□□□□ -0.2
SREBF1-211	ENST00000476994	PLEKHA3	Q9HB20	300 aa		13.79	□□□□□ -0.2
SREBF1-211	ENST00000476994	KLK9	Q9UKQ9	250 aa		13.79	□□□□□ -0.2
SREBF1-211	ENST00000476994	NPIPB5	A8MRT5	1133 aa		13.78	□□□□□ -0.2
SREBF1-211	ENST00000476994	CTRB1	P17538	263 aa		13.78	□□□□□ -0.2
SREBF1-211	ENST00000476994	PVRIG	Q6DKI7	326 aa		13.78	□□□□□ -0.2
SREBF1-211	ENST00000476994	CTRB2	Q6GPI1	263 aa		13.78	□□□□□ -0.2
SREBF1-211	ENST00000476994	UNQ5815/PRO19632	Q6UWF5	114 aa		13.78	□□□□□ -0.2
SREBF1-211	ENST00000476994	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.78	□□□□□ -0.2
SREBF1-211	ENST00000476994	ZNF114	Q8NC26	417 aa		13.78	□□□□□ -0.2
SREBF1-211	ENST00000476994	DTD1	Q8TEA8	209 aa		13.78	□□□□□ -0.2
SREBF1-211	ENST00000476994	ST6GAL2	Q96JF0	529 aa		13.78	□□□□□ -0.2
SREBF1-211	ENST00000476994	TMEM68	Q96MH6	324 aa		13.78	□□□□□ -0.2
SREBF1-211	ENST00000476994	DMRT1	Q9Y5R6	373 aa		13.78	□□□□□ -0.2
SREBF1-211	ENST00000476994	TRAV14DV4	A0A0A6YYC5	116 aa		13.77	□□□□□ -0.21
SREBF1-211	ENST00000476994	CEBPZOS	A8MTT3	80 aa		13.77	□□□□□ -0.21
SREBF1-211	ENST00000476994	MED6	O75586	246 aa		13.77	□□□□□ -0.21
SREBF1-211	ENST00000476994	SCGB1D2	O95969	90 aa		13.77	□□□□□ -0.21
SREBF1-211	ENST00000476994	REG1A	P05451	166 aa		13.77	□□□□□ -0.21
SREBF1-211	ENST00000476994	OR13C7	P0DN81	318 aa		13.77	□□□□□ -0.21
SREBF1-211	ENST00000476994	IAPP	P10997	89 aa		13.77	□□□□□ -0.21
SREBF1-211	ENST00000476994	PSMB6	P28072	239 aa		13.77	□□□□□ -0.21
SREBF1-211	ENST00000476994	HOXA1	P49639	335 aa	Predicted RBP	13.77	□□□□□ -0.21
SREBF1-211	ENST00000476994	MFAP2	P55001	183 aa		13.77	□□□□□ -0.21
SREBF1-211	ENST00000476994	RAP2B	P61225	183 aa		13.77	□□□□□ -0.21
SREBF1-211	ENST00000476994		Q5BKY6	102 aa		13.77	□□□□□ -0.21
SREBF1-211	ENST00000476994	C10orf99	Q6UWK7	81 aa		13.77	□□□□□ -0.21
SREBF1-211	ENST00000476994	C1QL4	Q86Z23	238 aa		13.77	□□□□□ -0.21
SREBF1-211	ENST00000476994	RNF126	Q9BV68	326 aa		13.77	□□□□□ -0.21
SREBF1-211	ENST00000476994	SSSCA1	O60232	199 aa		13.76	□□□□□ -0.21
SREBF1-211	ENST00000476994	FBXO24	O75426	580 aa		13.76	□□□□□ -0.21
SREBF1-211	ENST00000476994	MPC2	O95563	127 aa		13.76	□□□□□ -0.21
SREBF1-211	ENST00000476994	RNASE2	P10153	161 aa	Known RBP	13.76	□□□□□ -0.21
SREBF1-211	ENST00000476994	CD83	Q01151	205 aa		13.76	□□□□□ -0.21
SREBF1-211	ENST00000476994	RANGRF	Q9HD47	186 aa	Predicted RBP	13.76	□□□□□ -0.21
SREBF1-211	ENST00000476994	LSM5	Q9Y4Y9	91 aa	Known RBP	13.76	□□□□□ -0.21
SREBF1-211	ENST00000476994	DEDD	O75618	318 aa		13.75	□□□□□ -0.21
SREBF1-211	ENST00000476994	BRI3	O95415	125 aa		13.75	□□□□□ -0.21
SREBF1-211	ENST00000476994	IGLV1-40	P01703	118 aa		13.75	□□□□□ -0.21
SREBF1-211	ENST00000476994	IGHG4	P01861	327 aa		13.75	□□□□□ -0.21
SREBF1-211	ENST00000476994	LYL1	P12980	280 aa		13.75	□□□□□ -0.21
SREBF1-211	ENST00000476994	TMEM267	Q0VDI3	215 aa	Predicted RBP	13.75	□□□□□ -0.21
SREBF1-211	ENST00000476994	LRRC37A5P	Q49AS3	106 aa		13.75	□□□□□ -0.21
SREBF1-211	ENST00000476994	KLHDC1	Q8N7A1	406 aa		13.75	□□□□□ -0.21
SREBF1-211	ENST00000476994	OR5T1	Q8NG75	326 aa		13.75	□□□□□ -0.21
SREBF1-211	ENST00000476994	SMIM8	Q96KF7	97 aa		13.75	□□□□□ -0.21
SREBF1-211	ENST00000476994	FANCD2OS	Q96PS1	177 aa		13.75	□□□□□ -0.21
SREBF1-211	ENST00000476994	OR4C12	Q96R67	309 aa		13.75	□□□□□ -0.21
SREBF1-211	ENST00000476994	RAB40C	Q96S21	281 aa		13.75	□□□□□ -0.21
SREBF1-211	ENST00000476994	P2RX4	Q99571	388 aa		13.75	□□□□□ -0.21
SREBF1-211	ENST00000476994	OR5AC2	Q9NZP5	309 aa		13.75	□□□□□ -0.21
SREBF1-211	ENST00000476994	F11R	Q9Y624	299 aa	Known RBP	13.75	□□□□□ -0.21
SREBF1-211	ENST00000476994	C15orf62	A8K5M9	175 aa		13.74	□□□□□ -0.21
SREBF1-211	ENST00000476994	WRB	O00258	174 aa		13.74	□□□□□ -0.21
SREBF1-211	ENST00000476994	TAS2R30	P59541	319 aa		13.74	□□□□□ -0.21
SREBF1-211	ENST00000476994	S100A10	P60903	97 aa		13.74	□□□□□ -0.21
SREBF1-211	ENST00000476994	ERH	P84090	104 aa	Known RBP	13.74	□□□□□ -0.21
SREBF1-211	ENST00000476994	CIB3	Q96Q77	187 aa	Predicted RBP	13.74	□□□□□ -0.21
SREBF1-211	ENST00000476994	HEYL	Q9NQ87	328 aa	Predicted RBP	13.74	□□□□□ -0.21
SREBF1-211	ENST00000476994	ZFP57	Q9NU63	452 aa		13.74	□□□□□ -0.21
SREBF1-211	ENST00000476994	IGLV11-55	A0A075B6I3	123 aa		13.73	□□□□□ -0.21
SREBF1-211	ENST00000476994	TRBV9	A0A0B4J1U6	114 aa		13.73	□□□□□ -0.21
SREBF1-211	ENST00000476994	PSMB11	A5LHX3	300 aa		13.73	□□□□□ -0.21
SREBF1-211	ENST00000476994	PSMB8	P28062	276 aa		13.73	□□□□□ -0.21
SREBF1-211	ENST00000476994	CD300C	Q08708	224 aa		13.73	□□□□□ -0.21
SREBF1-211	ENST00000476994	C2orf83	Q53S99	150 aa		13.73	□□□□□ -0.21
SREBF1-211	ENST00000476994	ARSJ	Q5FYB0	599 aa	Predicted RBP	13.73	□□□□□ -0.21
SREBF1-211	ENST00000476994	PRSS54	Q6PEW0	395 aa		13.73	□□□□□ -0.21
SREBF1-211	ENST00000476994	ZNF329	Q86UD4	541 aa		13.73	□□□□□ -0.21
SREBF1-211	ENST00000476994	MRPL41	Q8IXM3	137 aa	Known RBP	13.73	□□□□□ -0.21
SREBF1-211	ENST00000476994	RNF152	Q8N8N0	203 aa		13.73	□□□□□ -0.21
SREBF1-211	ENST00000476994	C11orf44	Q8N8P7	122 aa		13.73	□□□□□ -0.21
SREBF1-211	ENST00000476994	SLC24A4	Q8NFF2	622 aa		13.73	□□□□□ -0.21
SREBF1-211	ENST00000476994	OR2T35	Q8NGX2	323 aa		13.73	□□□□□ -0.21
SREBF1-211	ENST00000476994	OR1P1	Q8NH06	330 aa		13.73	□□□□□ -0.21
SREBF1-211	ENST00000476994	NEURL2	Q9BR09	285 aa		13.73	□□□□□ -0.21
SREBF1-211	ENST00000476994	ENY2	Q9NPA8	101 aa		13.73	□□□□□ -0.21
SREBF1-211	ENST00000476994		H3BUA1	57 aa		13.72	□□□□□ -0.21
SREBF1-211	ENST00000476994	TSC22D2	O75157	780 aa		13.72	□□□□□ -0.21
SREBF1-211	ENST00000476994	LY86	O95711	162 aa		13.72	□□□□□ -0.21
SREBF1-211	ENST00000476994	PRH1	P02810	166 aa		13.72	□□□□□ -0.21
SREBF1-211	ENST00000476994	HTR2B	P41595	481 aa		13.72	□□□□□ -0.21
SREBF1-211	ENST00000476994	TMEM14EP	Q6UXP3	125 aa		13.72	□□□□□ -0.21
SREBF1-211	ENST00000476994	TCTE3	Q8IZS6	198 aa		13.72	□□□□□ -0.21
SREBF1-211	ENST00000476994	MYOZ3	Q8TDC0	251 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms