RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 CEACAM21Q3KPI0 293 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 FAM201AQ5SY85 155 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 FAM90A2PQ658T7 463 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 RUSC1-AS1Q66K80 236 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 SPSB3Q6PJ21 355 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 LYPD2Q6UXB3 125 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 ZNF818PQ6ZRF7 136 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 SLC16A13Q7RTY0 426 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 WDR86Q86TI4 376 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 ZNF573Q86YE8 665 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 FAM185AQ8N0U4 392 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 ZNF561Q8N587 486 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 TMEM252Q8N6L7 170 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 TMEM217Q8N7C4 229 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 OR5A2Q8NGI9 324 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 OR51H1Q8NH63 302 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 RNASE11Q8TAA1 199 aaKnown RBP3.4□□□□□ -1.87
VPS13D-206ENST00000476045 SFT2D1Q8WV19 159 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 OR5P3Q8WZ94 311 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 H1FXQ92522 213 aaKnown RBP3.4□□□□□ -1.87
VPS13D-206ENST00000476045 GPR146Q96CH1 333 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 SDSLQ96GA7 329 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 GAFA1Q96PS6 74 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 SPIN2AQ99865 258 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 SPIN2BQ9BPZ2 258 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 PBDC1Q9BVG4 233 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 SCRT1Q9BWW7 348 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 PKIBQ9C010 78 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 NPFFR1Q9GZQ6 430 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 SLC25A31Q9H0C2 315 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 TMEM222Q9H0R3 208 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 SLC35B3Q9H1N7 401 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 MTCH1Q9NZJ7 389 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 PITPNC1Q9UKF7 332 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 TMED3Q9Y3Q3 217 aa3.4□□□□□ -1.87
VPS13D-206ENST00000476045 TBL2Q9Y4P3 447 aaKnown RBP3.4□□□□□ -1.87
VPS13D-206ENST00000476045 IGHV3OR15-7A0A075B7D8 119 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 A0A0G2JRQ6 117 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 H3BP45 60 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 SIRPB1O00241 398 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 DEGS1O15121 323 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 CHST1O43916 411 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 RHBDL1O75783 438 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 NXPH2O95156 264 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 OR2C1O95371 312 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 CDS2O95674 445 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 TMEM50AO95807 157 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 NAPSAO96009 420 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 IGHV4-59P01825 116 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 CLEC3BP05452 202 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 S100A6P06703 90 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 SRP19P09132 144 aaKnown RBP3.39□□□□□ -1.87
VPS13D-206ENST00000476045 PGA5P0DJD9 388 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 PSG2P11465 335 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 NQO2P16083 231 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 NDUFB7P17568 137 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 RAB5AP20339 215 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 TAGLN2P37802 199 aaKnown RBP3.39□□□□□ -1.87
VPS13D-206ENST00000476045 KIR2DS4P43632 304 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 RAB5CP51148 216 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 UBE2KP61086 200 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 ARF6P62330 175 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 RPL31P62899 125 aaKnown RBP3.39□□□□□ -1.87
VPS13D-206ENST00000476045 HLA-DRB3P79483 266 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 IL24Q13007 206 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 KIR2DS1Q14954 304 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 MPV17LQ2QL34 196 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 SOHLH1Q5JUK2 328 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 AKR1C8PQ5T2L2 129 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 LCE1AQ5T7P2 110 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 SLC25A24Q6NUK1 477 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 ZNF826PQ6ZT77 177 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 C16orf82Q7Z2V1 217 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 ODF3L1Q8IXM7 274 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 C11orf53Q8IXP5 236 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 SAXO1Q8IYX7 474 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 FAM58AQ8N1B3 248 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 FAM24BQ8N5W8 94 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 OR5C1Q8NGR4 320 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 OR2T6Q8NHC8 308 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 LINC01006Q8NI28 216 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 LYPD6BQ8NI32 183 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 MRPL30Q8TCC3 161 aaKnown RBP3.39□□□□□ -1.87
VPS13D-206ENST00000476045 IL1F10Q8WWZ1 152 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 TMEM56Q96MV1 263 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 CCL13Q99616 98 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 OR51I2Q9H344 312 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 SEBOXQ9HB31 216 aaPredicted RBP3.39□□□□□ -1.87
VPS13D-206ENST00000476045 SIRT7Q9NRC8 400 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 OR1A1Q9P1Q5 309 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 RBM7Q9Y580 266 aaKnown RBP3.39□□□□□ -1.87
VPS13D-206ENST00000476045 TMEM56-RWDD3S4R434 201 aa3.39□□□□□ -1.87
VPS13D-206ENST00000476045 IGKV1D-17A0A075B6S4 117 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 TRAV24A0A0B4J272 114 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 A0A1B0GW64 132 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 FAM90A10PA6NDY2 464 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 FAM90A8PA6NJQ4 464 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 FAM90A7PA6NKC0 464 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 FAM90A22PA8MWA6 464 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 FAM90A12PA8MX19 464 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 302.9 ms