RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 EXOC3-AS1Q8N2X6 119 aa2.43□□□□□ -2.02
TM9SF3-204ENST00000475401 EIF4E3Q8N5X7 224 aaKnown RBP2.43□□□□□ -2.02
TM9SF3-204ENST00000475401 C12orf29Q8N999 325 aa2.43□□□□□ -2.02
TM9SF3-204ENST00000475401 C2orf50Q96LR7 162 aa2.43□□□□□ -2.02
TM9SF3-204ENST00000475401 CCDC90BQ9GZT6 254 aa2.43□□□□□ -2.02
TM9SF3-204ENST00000475401 BATF3Q9NR55 127 aa2.43□□□□□ -2.02
TM9SF3-204ENST00000475401 TVP23BQ9NYZ1 205 aa2.43□□□□□ -2.02
TM9SF3-204ENST00000475401 HEY1Q9Y5J3 304 aa2.43□□□□□ -2.02
TM9SF3-204ENST00000475401 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
TM9SF3-204ENST00000475401 SETD5Q9C0A6 1442 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 DOCK6Q96HP0 2047 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 MAST2Q6P0Q8 1798 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 TRAV9-1A0A075B6T8 112 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 IGHV3-73A0A0B4J1V6 119 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 G3V2T6 193 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 H7C1C5 153 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 UBE2L6O14933 153 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 IFNA14P01570 189 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 PRM2P04554 102 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 CRHP06850 196 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 TFPTP0C1Z6 253 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 RPS4Y1P22090 263 aaKnown RBP2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 CD24P25063 80 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 ALDH3A1P30838 453 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 ATP5G3P48201 142 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 ZNF80P51504 273 aaPredicted RBP2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 TAS2R30P59541 319 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 RAB4BP61018 213 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 LCN6P62502 163 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 S100A12P80511 92 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 HTR4Q13639 388 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 LGALSLQ3ZCW2 172 aaPredicted RBP2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 SLC25A40Q8TBP6 338 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 H1FXQ92522 213 aaKnown RBP2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 LYSMD1Q96S90 227 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 MGLLQ99685 303 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 PBOV1Q9GZY1 135 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 MED29Q9NX70 200 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 IL36BQ9NZH7 164 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 ZSWIM8A7E2V4 1837 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 NUP160Q12769 1436 aa2.42□□□□□ -2.02
TM9SF3-204ENST00000475401 FBN1P35555 2871 aaKnown RBP2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 PLXNB1O43157 2135 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 A0A1W2PRE2 83 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 MAP1LC3B2A6NCE7 125 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 AIPO00170 330 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 OR2J2O76002 312 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 CPSF4O95639 269 aaKnown RBP2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 NPYP01303 97 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 HIST1H2BOP23527 126 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 S100A7P31151 101 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 HIST1H2BBP33778 126 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 GLRXP35754 106 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 CSN1S1P47710 185 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 FXYD7P58549 80 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 HIST1H2BDP58876 126 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 HIST1H2BCP62807 126 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 ZNF117Q03924 483 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 HIST2H2BEQ16778 126 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 RPL22L1Q6P5R6 122 aaKnown RBP2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 TOMM20LQ6UXN7 152 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 TMEM35BQ8NCS4 154 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 ZNF439Q8NDP4 499 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 DYDC1Q8WWB3 177 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 HIST1H2BHQ93079 126 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 PLEKHB2Q96CS7 222 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 DNAJC30Q96LL9 226 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 SERPINI1Q99574 410 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 HIST1H2BNQ99877 126 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 HIST1H2BMQ99879 126 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 DERL1Q9BUN8 251 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 MAP1LC3BQ9GZQ8 125 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 LRTM1Q9HBL6 345 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 SSR3Q9UNL2 185 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 FUT9Q9Y231 359 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 AMMECR1Q9Y4X0 333 aaPredicted RBP2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 SPATA31E1Q6ZUB1 1445 aa2.41□□□□□ -2.02
TM9SF3-204ENST00000475401 PRR14LQ5THK1 2151 aa2.4□□□□□ -2.02
TM9SF3-204ENST00000475401 SHANK3Q9BYB0 1731 aa2.4□□□□□ -2.02
TM9SF3-204ENST00000475401 ZNF638Q14966 1978 aaKnown RBP2.4□□□□□ -2.02
TM9SF3-204ENST00000475401 SCN10AQ9Y5Y9 1956 aa2.4□□□□□ -2.02
TM9SF3-204ENST00000475401 NYNRINQ9P2P1 1898 aaKnown RBP2.4□□□□□ -2.03
TM9SF3-204ENST00000475401 TRAV38-1A0A0B4J264 116 aa2.4□□□□□ -2.03
TM9SF3-204ENST00000475401 TSTD3H0UI37 97 aa2.4□□□□□ -2.03
TM9SF3-204ENST00000475401 LEPROTO15243 131 aa2.4□□□□□ -2.03
TM9SF3-204ENST00000475401 NDUFC2O95298 119 aa2.4□□□□□ -2.03
TM9SF3-204ENST00000475401 IFNA10P01566 189 aa2.4□□□□□ -2.03
TM9SF3-204ENST00000475401 ZNF22P17026 224 aaPredicted RBP2.4□□□□□ -2.03
TM9SF3-204ENST00000475401 LPAR6P43657 344 aa2.4□□□□□ -2.03
TM9SF3-204ENST00000475401 XCL1P47992 114 aa2.4□□□□□ -2.03
TM9SF3-204ENST00000475401 RWDD2BP57060 319 aa2.4□□□□□ -2.03
TM9SF3-204ENST00000475401 DCUN1D2Q6PH85 259 aa2.4□□□□□ -2.03
TM9SF3-204ENST00000475401 NUP35Q8NFH5 326 aa2.4□□□□□ -2.03
TM9SF3-204ENST00000475401 OR10D4PQ8NGN7 298 aa2.4□□□□□ -2.03
TM9SF3-204ENST00000475401 OR13D1Q8NGV5 346 aa2.4□□□□□ -2.03
TM9SF3-204ENST00000475401 ZNF675Q8TD23 568 aa2.4□□□□□ -2.03
TM9SF3-204ENST00000475401 ACOT12Q8WYK0 555 aa2.4□□□□□ -2.03
TM9SF3-204ENST00000475401 GPER1Q99527 375 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms