RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 SUMF2Q8NBJ7 301 aa9.25□□□□□ -0.93
HLA-DOB-208ENST00000475235 OR9G1Q8NH87 305 aa9.25□□□□□ -0.93
HLA-DOB-208ENST00000475235 GPR146Q96CH1 333 aa9.25□□□□□ -0.93
HLA-DOB-208ENST00000475235 NKX3-1Q99801 234 aaPredicted RBP9.25□□□□□ -0.93
HLA-DOB-208ENST00000475235 OR51E2Q9H255 320 aa9.25□□□□□ -0.93
HLA-DOB-208ENST00000475235 LINC00574Q9H8X3 128 aa9.25□□□□□ -0.93
HLA-DOB-208ENST00000475235 CALYQ9NYX4 217 aa9.25□□□□□ -0.93
HLA-DOB-208ENST00000475235 MRPS28Q9Y2Q9 187 aaKnown RBP9.25□□□□□ -0.93
HLA-DOB-208ENST00000475235 A0A1W2PPK0 400 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 MEGF11A6BM72 1044 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 FAM90A22PA8MWA6 464 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 OOSP1A8MZH6 123 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 GEMIN2O14893 280 aaKnown RBP9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 OR2F2O95006 317 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 CNIH1O95406 144 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 MAS1P04201 325 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 CGB3P0DN86 165 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 CGB7P0DN87 165 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 NDUFA6P56556 154 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 SPHARQ15513 63 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 HLA-DRB5Q30154 266 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 FAM71F2Q6NXP2 309 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 GLIPR1L1Q6UWM5 242 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 ALKAL2Q6UX46 152 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 Q6ZTK2 550 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 H2BFWTQ7Z2G1 175 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 C16orf82Q7Z2V1 217 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 OR13A1Q8NGR1 328 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 OR2T35Q8NGX2 323 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 KIRREL1Q96J84 757 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 ZNF286AQ9HBT8 521 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 IDI2-AS1Q9NZ38 188 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 NAT8Q9UHE5 227 aa9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 AK6Q9Y3D8 172 aaKnown RBP9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 AMMECR1Q9Y4X0 333 aaPredicted RBP9.24□□□□□ -0.93
HLA-DOB-208ENST00000475235 TMEM30CPA0ZSE6 113 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 NPIPB11E5RHQ5 1161 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 BUB1B-PAK6H3BSN5 160 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 OR2C1O95371 312 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 SIX6O95475 246 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 SERPINE2P07093 398 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 FUT3P21217 361 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 NFYBP25208 207 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 RBM39Q14498 530 aaKnown RBP9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 C2orf68Q2NKX9 166 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 TMEM219Q86XT9 240 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 IZUMO1Q8IYV9 350 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 Q8N2B8 174 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 SLC35G3Q8N808 338 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 OR51S1Q8NGJ8 323 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 OR1P1Q8NH06 330 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 PLPPR1Q8TBJ4 325 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 SOSTQ9BQB4 213 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 PRSS22Q9GZN4 317 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 OR5AC2Q9NZP5 309 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 VAX2Q9UIW0 290 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 SIGLEC9Q9Y336 463 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 UFC1Q9Y3C8 167 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 OR51B2Q9Y5P1 312 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 NBEAL1Q6ZS30 2694 aa9.23□□□□□ -0.93
HLA-DOB-208ENST00000475235 FAM90A10PA6NDY2 464 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 FAM90A18PA6NE21 464 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 FAM90A16PA6NEW6 464 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 FAM90A20PA6NIJ5 464 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 FAM90A7PA6NKC0 464 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 FAM90A12PA8MX19 464 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 FAM90A5PA8MXJ8 464 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 FAM90A23PA8MXZ1 464 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 G3V3Q6 166 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 PIN1P1O15428 100 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 PF4P02776 101 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 FAM90A15PP0C7V4 464 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 FAM90A13PP0C7W8 464 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 FAM90A14PP0C7W9 464 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 FAM90A24PP0C7X0 464 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 CXCL2P19875 107 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 PSG5Q15238 335 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 TPTE2P1Q5T6R2 138 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 ZNF367Q7RTV3 350 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 KLHDC1Q8N7A1 406 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 MOB3AQ96BX8 217 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 C20orf24Q9BUV8 137 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 ZNF702PQ9H963 129 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 UQCC1Q9NVA1 299 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 PSG8Q9UQ74 426 aa9.22□□□□□ -0.93
HLA-DOB-208ENST00000475235 A0A1W2PP11 408 aa9.21□□□□□ -0.93
HLA-DOB-208ENST00000475235 IFITM5A6NNB3 132 aa9.21□□□□□ -0.93
HLA-DOB-208ENST00000475235 J3QR06 171 aa9.21□□□□□ -0.93
HLA-DOB-208ENST00000475235 MFNGO00587 321 aa9.21□□□□□ -0.93
HLA-DOB-208ENST00000475235 ESDP10768 282 aa9.21□□□□□ -0.93
HLA-DOB-208ENST00000475235 RPS16P62249 146 aaKnown RBP9.21□□□□□ -0.93
HLA-DOB-208ENST00000475235 TMEM128Q5BJH2 165 aa9.21□□□□□ -0.93
HLA-DOB-208ENST00000475235 COA6Q5JTJ3 125 aaKnown RBP9.21□□□□□ -0.93
HLA-DOB-208ENST00000475235 GLT8D1Q68CQ7 371 aa9.21□□□□□ -0.93
HLA-DOB-208ENST00000475235 C22orf42Q6IC83 251 aa9.21□□□□□ -0.93
HLA-DOB-208ENST00000475235 OR10K2Q6IF99 312 aa9.21□□□□□ -0.93
HLA-DOB-208ENST00000475235 LYPD6Q86Y78 171 aa9.21□□□□□ -0.93
HLA-DOB-208ENST00000475235 RPEQ96AT9 228 aa9.21□□□□□ -0.93
HLA-DOB-208ENST00000475235 CLCC1Q96S66 551 aa9.21□□□□□ -0.93
HLA-DOB-208ENST00000475235 CST11Q9H112 138 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms