RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 RAB29O14966 203 aa16.95■□□□□ 0.3
SMIM11A-204ENST00000474455 FFAR4Q5NUL3 377 aa16.95■□□□□ 0.3
SMIM11A-204ENST00000474455 FAM168AQ92567 244 aa16.95■□□□□ 0.3
SMIM11A-204ENST00000474455 SLC25A22Q9H936 323 aa16.95■□□□□ 0.3
SMIM11A-204ENST00000474455 PATZ1Q9HBE1 687 aaKnown RBP16.95■□□□□ 0.3
SMIM11A-204ENST00000474455 PRRC2AP48634 2157 aaKnown RBP16.95■□□□□ 0.3
SMIM11A-204ENST00000474455 AKAP9Q99996 3911 aa16.95■□□□□ 0.3
SMIM11A-204ENST00000474455 IGHV4-30-2A0A087WSY4 118 aa16.95■□□□□ 0.3
SMIM11A-204ENST00000474455 FOSL1P15407 271 aa16.95■□□□□ 0.3
SMIM11A-204ENST00000474455 MDKP21741 143 aaPredicted RBP16.95■□□□□ 0.3
SMIM11A-204ENST00000474455 EIF4EBP1Q13541 118 aaPredicted RBP16.95■□□□□ 0.3
SMIM11A-204ENST00000474455 C10orf105Q8TEF2 133 aa16.95■□□□□ 0.3
SMIM11A-204ENST00000474455 PCGF1Q9BSM1 259 aa16.95■□□□□ 0.3
SMIM11A-204ENST00000474455 ZFHX3Q15911 3703 aa16.94■□□□□ 0.3
SMIM11A-204ENST00000474455 C15orf65H3BRN8 121 aa16.94■□□□□ 0.3
SMIM11A-204ENST00000474455 GNB2P62879 340 aa16.94■□□□□ 0.3
SMIM11A-204ENST00000474455 LTC4SQ16873 150 aa16.94■□□□□ 0.3
SMIM11A-204ENST00000474455 UTF1Q5T230 341 aa16.94■□□□□ 0.3
SMIM11A-204ENST00000474455 NECAP1Q8NC96 275 aa16.94■□□□□ 0.3
SMIM11A-204ENST00000474455 ST8SIA5O15466 376 aa16.93■□□□□ 0.3
SMIM11A-204ENST00000474455 PDE6DO43924 150 aa16.93■□□□□ 0.3
SMIM11A-204ENST00000474455 HBZP02008 142 aa16.93■□□□□ 0.3
SMIM11A-204ENST00000474455 RPL31P62899 125 aaKnown RBP16.93■□□□□ 0.3
SMIM11A-204ENST00000474455 C17orf58Q2M2W7 97 aa16.93■□□□□ 0.3
SMIM11A-204ENST00000474455 TMEM200BQ69YZ2 307 aa16.93■□□□□ 0.3
SMIM11A-204ENST00000474455 CELSR1Q9NYQ6 3014 aa16.93■□□□□ 0.3
SMIM11A-204ENST00000474455 IGHV3-43A0A0B4J1X8 118 aa16.93■□□□□ 0.3
SMIM11A-204ENST00000474455 CGB3P0DN86 165 aa16.93■□□□□ 0.3
SMIM11A-204ENST00000474455 CGB7P0DN87 165 aa16.93■□□□□ 0.3
SMIM11A-204ENST00000474455 IGHV3-43DP0DP04 118 aa16.93■□□□□ 0.3
SMIM11A-204ENST00000474455 CCL3L1P16619 93 aa16.93■□□□□ 0.3
SMIM11A-204ENST00000474455 OR8B3Q8NGG8 313 aa16.93■□□□□ 0.3
SMIM11A-204ENST00000474455 DTD1Q8TEA8 209 aa16.93■□□□□ 0.3
SMIM11A-204ENST00000474455 OR8B2Q96RD0 313 aa16.93■□□□□ 0.3
SMIM11A-204ENST00000474455 NPCDR1Q9BY65 106 aa16.93■□□□□ 0.3
SMIM11A-204ENST00000474455 A0A1W2PPQ1 181 aa16.92■□□□□ 0.3
SMIM11A-204ENST00000474455 MMP23AO75900 390 aa16.92■□□□□ 0.3
SMIM11A-204ENST00000474455 CR1LQ2VPA4 569 aa16.92■□□□□ 0.3
SMIM11A-204ENST00000474455 DEFB113Q30KQ7 82 aa16.92■□□□□ 0.3
SMIM11A-204ENST00000474455 CLEC2AQ6UVW9 174 aa16.92■□□□□ 0.3
SMIM11A-204ENST00000474455 OR52L2PQ8NGH6 319 aa16.92■□□□□ 0.3
SMIM11A-204ENST00000474455 GALMQ96C23 342 aa16.92■□□□□ 0.3
SMIM11A-204ENST00000474455 LURAP1Q96LR2 239 aa16.92■□□□□ 0.3
SMIM11A-204ENST00000474455 TXNDC17Q9BRA2 123 aa16.92■□□□□ 0.3
SMIM11A-204ENST00000474455 CLN8Q9UBY8 286 aa16.92■□□□□ 0.3
SMIM11A-204ENST00000474455 VWC2LB2RUY7 222 aa16.91■□□□□ 0.3
SMIM11A-204ENST00000474455 F6UZH7 168 aa16.91■□□□□ 0.3
SMIM11A-204ENST00000474455 IQCJQ1A5X6 159 aa16.91■□□□□ 0.3
SMIM11A-204ENST00000474455 ZNF664Q8N3J9 261 aa16.91■□□□□ 0.3
SMIM11A-204ENST00000474455 PIMREGQ9BSJ6 248 aa16.91■□□□□ 0.3
SMIM11A-204ENST00000474455 CCDC168Q8NDH2 2452 aa16.91■□□□□ 0.3
SMIM11A-204ENST00000474455 IGHV4-61A0A0C4DH41 118 aa16.9■□□□□ 0.3
SMIM11A-204ENST00000474455 IGHV3-7P01780 117 aa16.9■□□□□ 0.3
SMIM11A-204ENST00000474455 ZFP36P26651 326 aaKnown RBP16.9■□□□□ 0.3
SMIM11A-204ENST00000474455 LMO4P61968 165 aa16.9■□□□□ 0.3
SMIM11A-204ENST00000474455 C22orf46C9J442 243 aa16.9■□□□□ 0.3
SMIM11A-204ENST00000474455 PAGE4O60829 102 aa16.9■□□□□ 0.3
SMIM11A-204ENST00000474455 G6PCP35575 357 aa16.9■□□□□ 0.3
SMIM11A-204ENST00000474455 CDC34P49427 236 aaPredicted RBP16.9■□□□□ 0.3
SMIM11A-204ENST00000474455 SSX2Q16385 188 aa16.9■□□□□ 0.3
SMIM11A-204ENST00000474455 CLEC12BQ2HXU8 276 aa16.9■□□□□ 0.3
SMIM11A-204ENST00000474455 ELOVL1Q9BW60 279 aa16.9■□□□□ 0.3
SMIM11A-204ENST00000474455 KCNIP2Q9NS61 270 aa16.9■□□□□ 0.3
SMIM11A-204ENST00000474455 CALYQ9NYX4 217 aa16.9■□□□□ 0.3
SMIM11A-204ENST00000474455 FUT9Q9Y231 359 aa16.9■□□□□ 0.3
SMIM11A-204ENST00000474455 TRGV10A0A0A0MS01 117 aa16.89■□□□□ 0.29
SMIM11A-204ENST00000474455 C11orf94C9JXX5 98 aa16.89■□□□□ 0.29
SMIM11A-204ENST00000474455 KRASP01116 189 aa16.89■□□□□ 0.29
SMIM11A-204ENST00000474455 CNN1P51911 297 aaKnown RBP16.89■□□□□ 0.29
SMIM11A-204ENST00000474455 DLX1P56177 255 aa16.89■□□□□ 0.29
SMIM11A-204ENST00000474455 OR2D2Q9H210 308 aa16.89■□□□□ 0.29
SMIM11A-204ENST00000474455 NCOR1P1Q9H4R4 102 aa16.89■□□□□ 0.29
SMIM11A-204ENST00000474455 CR1P17927 2039 aa16.89■□□□□ 0.29
SMIM11A-204ENST00000474455 hADV38S2A0JD32 116 aa16.88■□□□□ 0.29
SMIM11A-204ENST00000474455 RAMP3O60896 148 aa16.88■□□□□ 0.29
SMIM11A-204ENST00000474455 FOXL1Q12952 345 aa16.88■□□□□ 0.29
SMIM11A-204ENST00000474455 TMEM37Q8WXS4 190 aa16.88■□□□□ 0.29
SMIM11A-204ENST00000474455 CORO2AQ92828 525 aa16.88■□□□□ 0.29
SMIM11A-204ENST00000474455 LEAP2Q969E1 77 aa16.88■□□□□ 0.29
SMIM11A-204ENST00000474455 SSBP3Q9BWW4 388 aaPredicted RBP16.88■□□□□ 0.29
SMIM11A-204ENST00000474455 BEX4Q9NWD9 120 aaPredicted RBP16.88■□□□□ 0.29
SMIM11A-204ENST00000474455 LINC00312Q9Y6C7 94 aa16.88■□□□□ 0.29
SMIM11A-204ENST00000474455 KBTBD11-OT1A0A1B0GTJ5 212 aa16.88■□□□□ 0.29
SMIM11A-204ENST00000474455 MPDU1O75352 247 aa16.88■□□□□ 0.29
SMIM11A-204ENST00000474455 SPCS3P61009 180 aa16.88■□□□□ 0.29
SMIM11A-204ENST00000474455 RPL30P62888 115 aaKnown RBP16.88■□□□□ 0.29
SMIM11A-204ENST00000474455 PRB3Q04118 309 aaPredicted RBP16.88■□□□□ 0.29
SMIM11A-204ENST00000474455 H2BFWTQ7Z2G1 175 aa16.88■□□□□ 0.29
SMIM11A-204ENST00000474455 TMEM144Q7Z5S9 345 aa16.88■□□□□ 0.29
SMIM11A-204ENST00000474455 GBGT1Q8N5D6 347 aa16.88■□□□□ 0.29
SMIM11A-204ENST00000474455 GATAD1Q8WUU5 269 aa16.88■□□□□ 0.29
SMIM11A-204ENST00000474455 FAM90A9PA6NNJ1 464 aa16.87■□□□□ 0.29
SMIM11A-204ENST00000474455 ZNF705GA8MUZ8 300 aaPredicted RBP16.87■□□□□ 0.29
SMIM11A-204ENST00000474455 HMGB3O15347 200 aaKnown RBP16.87■□□□□ 0.29
SMIM11A-204ENST00000474455 S1PR2O95136 353 aa16.87■□□□□ 0.29
SMIM11A-204ENST00000474455 MEF2CQ06413 473 aaPredicted RBP16.87■□□□□ 0.29
SMIM11A-204ENST00000474455 HNF4GQ14541 408 aa16.87■□□□□ 0.29
SMIM11A-204ENST00000474455 PRAMEF5Q5TYX0 476 aa16.87■□□□□ 0.29
SMIM11A-204ENST00000474455 NINJ1Q92982 152 aa16.87■□□□□ 0.29
SMIM11A-204ENST00000474455 RPUSD1Q9UJJ7 312 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms