RNA–Protein interactions for RNA: ENST00000474344.1

VANGL1-205, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 2

Gene VANGL1, Length 461 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-205ENST00000474344 OR2C3Q8N628 320 aa8.04□□□□□ -1.12
VANGL1-205ENST00000474344 ZNF114Q8NC26 417 aa8.04□□□□□ -1.12
VANGL1-205ENST00000474344 NECAP1Q8NC96 275 aa8.04□□□□□ -1.12
VANGL1-205ENST00000474344 DUX3Q96PT4 197 aa8.04□□□□□ -1.12
VANGL1-205ENST00000474344 NUDT15Q9NV35 164 aa8.04□□□□□ -1.12
VANGL1-205ENST00000474344 CACNG5Q9UF02 275 aa8.04□□□□□ -1.12
VANGL1-205ENST00000474344 TRAV6A0A075B6T7 132 aa8.03□□□□□ -1.12
VANGL1-205ENST00000474344 PIGBOS1A0A0B4J2F0 54 aa8.03□□□□□ -1.12
VANGL1-205ENST00000474344 A0A1B0GU03 582 aa8.03□□□□□ -1.12
VANGL1-205ENST00000474344 FAM223BA6NKX1 122 aa8.03□□□□□ -1.12
VANGL1-205ENST00000474344 NUDT19A8MXV4 375 aa8.03□□□□□ -1.12
VANGL1-205ENST00000474344 OR2J3O76001 311 aa8.03□□□□□ -1.12
VANGL1-205ENST00000474344 NDUFB8O95169 186 aa8.03□□□□□ -1.12
VANGL1-205ENST00000474344 IGHV3-11P01762 117 aa8.03□□□□□ -1.12
VANGL1-205ENST00000474344 HLA-AP01891 365 aaKnown RBP8.03□□□□□ -1.12
VANGL1-205ENST00000474344 H2AFB2P0C5Z0 115 aa8.03□□□□□ -1.12
VANGL1-205ENST00000474344 SULT1A3P0DMM9 295 aa8.03□□□□□ -1.12
VANGL1-205ENST00000474344 SULT1A4P0DMN0 295 aa8.03□□□□□ -1.12
VANGL1-205ENST00000474344 HIST1H1BP16401 226 aaKnown RBP8.03□□□□□ -1.12
VANGL1-205ENST00000474344 SPCS3P61009 180 aa8.03□□□□□ -1.12
VANGL1-205ENST00000474344 BSXQ3C1V8 233 aa8.03□□□□□ -1.12
VANGL1-205ENST00000474344 NRARPQ7Z6K4 114 aa8.03□□□□□ -1.12
VANGL1-205ENST00000474344 FAM223AQ8IWN6 122 aa8.03□□□□□ -1.12
VANGL1-205ENST00000474344 OR11H1Q8NG94 326 aa8.03□□□□□ -1.12
VANGL1-205ENST00000474344 MITD1Q8WV92 249 aa8.03□□□□□ -1.12
VANGL1-205ENST00000474344 ZNF355PQ9NSJ1 428 aa8.03□□□□□ -1.12
VANGL1-205ENST00000474344 TMED3Q9Y3Q3 217 aa8.03□□□□□ -1.12
VANGL1-205ENST00000474344 F11RQ9Y624 299 aaKnown RBP8.03□□□□□ -1.12
VANGL1-205ENST00000474344 PRKDCP78527 4128 aaKnown RBP8.03□□□□□ -1.12
VANGL1-205ENST00000474344 TGP01266 2768 aa8.03□□□□□ -1.12
VANGL1-205ENST00000474344 COL7A1Q02388 2944 aa8.02□□□□□ -1.13
VANGL1-205ENST00000474344 IGHV4OR15-8A0A075B7B6 117 aa8.02□□□□□ -1.13
VANGL1-205ENST00000474344 A0A087WW49 117 aa8.02□□□□□ -1.13
VANGL1-205ENST00000474344 HSPB1P04792 205 aaKnown RBP8.02□□□□□ -1.13
VANGL1-205ENST00000474344 IL5P05113 134 aa8.02□□□□□ -1.13
VANGL1-205ENST00000474344 ZNF616Q08AN1 781 aa8.02□□□□□ -1.13
VANGL1-205ENST00000474344 SMCO1Q147U7 214 aa8.02□□□□□ -1.13
VANGL1-205ENST00000474344 OR52B4Q8NGK2 314 aa8.02□□□□□ -1.13
VANGL1-205ENST00000474344 OR1N2Q8NGR9 330 aa8.02□□□□□ -1.13
VANGL1-205ENST00000474344 OR1P1Q8NH06 330 aa8.02□□□□□ -1.13
VANGL1-205ENST00000474344 CCDC140Q96MF4 163 aa8.02□□□□□ -1.13
VANGL1-205ENST00000474344 OR5B12Q96R08 314 aa8.02□□□□□ -1.13
VANGL1-205ENST00000474344 MARVELD1Q9BSK0 173 aa8.02□□□□□ -1.13
VANGL1-205ENST00000474344 HINT2Q9BX68 163 aa8.02□□□□□ -1.13
VANGL1-205ENST00000474344 HSPB7Q9UBY9 170 aa8.02□□□□□ -1.13
VANGL1-205ENST00000474344 FBXL7Q9UJT9 491 aa8.02□□□□□ -1.13
VANGL1-205ENST00000474344 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.01□□□□□ -1.13
VANGL1-205ENST00000474344 C13orf42A0A1B0GVH6 325 aa8.01□□□□□ -1.13
VANGL1-205ENST00000474344 K7EIM0 57 aa8.01□□□□□ -1.13
VANGL1-205ENST00000474344 DHFRP00374 187 aa8.01□□□□□ -1.13
VANGL1-205ENST00000474344 IFNA17P01571 189 aa8.01□□□□□ -1.13
VANGL1-205ENST00000474344 TRBV12-3P01733 135 aa8.01□□□□□ -1.13
VANGL1-205ENST00000474344 HOXB5P09067 269 aa8.01□□□□□ -1.13
VANGL1-205ENST00000474344 RNASE2P10153 161 aaKnown RBP8.01□□□□□ -1.13
VANGL1-205ENST00000474344 RAB25P57735 213 aa8.01□□□□□ -1.13
VANGL1-205ENST00000474344 ATP5G2Q06055 141 aa8.01□□□□□ -1.13
VANGL1-205ENST00000474344 TNFRSF9Q07011 255 aa8.01□□□□□ -1.13
VANGL1-205ENST00000474344 C15orf32Q32M92 178 aa8.01□□□□□ -1.13
VANGL1-205ENST00000474344 SPINK9Q5DT21 86 aa8.01□□□□□ -1.13
VANGL1-205ENST00000474344 GGNBP1Q5YKI7 109 aa8.01□□□□□ -1.13
VANGL1-205ENST00000474344 RNASE11Q8TAA1 199 aaKnown RBP8.01□□□□□ -1.13
VANGL1-205ENST00000474344 ZNF431Q8TF32 576 aaPredicted RBP8.01□□□□□ -1.13
VANGL1-205ENST00000474344 TMEM170AQ8WVE7 144 aa8.01□□□□□ -1.13
VANGL1-205ENST00000474344 SEC22CQ9BRL7 303 aa8.01□□□□□ -1.13
VANGL1-205ENST00000474344 PLEKHA3Q9HB20 300 aa8.01□□□□□ -1.13
VANGL1-205ENST00000474344 MFSD2BA6NFX1 497 aa8□□□□□ -1.13
VANGL1-205ENST00000474344 MPTX1A8MV57 137 aa8□□□□□ -1.13
VANGL1-205ENST00000474344 F8W735 103 aaPredicted RBP8□□□□□ -1.13
VANGL1-205ENST00000474344 LINC01619G3V211 115 aa8□□□□□ -1.13
VANGL1-205ENST00000474344 I3L2K1 104 aa8□□□□□ -1.13
VANGL1-205ENST00000474344 BMPR1BO00238 502 aa8□□□□□ -1.13
VANGL1-205ENST00000474344 WIPF1O43516 503 aa8□□□□□ -1.13
VANGL1-205ENST00000474344 ADAP1O75689 374 aa8□□□□□ -1.13
VANGL1-205ENST00000474344 PF4P02776 101 aa8□□□□□ -1.13
VANGL1-205ENST00000474344 DEFA4P12838 97 aa8□□□□□ -1.13
VANGL1-205ENST00000474344 SPNP16150 400 aa8□□□□□ -1.13
VANGL1-205ENST00000474344 ERHP84090 104 aaKnown RBP8□□□□□ -1.13
VANGL1-205ENST00000474344 EXOSC2Q13868 293 aaKnown RBP8□□□□□ -1.13
VANGL1-205ENST00000474344 C4orf46Q504U0 113 aa8□□□□□ -1.13
VANGL1-205ENST00000474344 SAMD5Q5TGI4 173 aa8□□□□□ -1.13
VANGL1-205ENST00000474344 C11orf87Q6NUJ2 197 aa8□□□□□ -1.13
VANGL1-205ENST00000474344 SLC25A24Q6NUK1 477 aa8□□□□□ -1.13
VANGL1-205ENST00000474344 OR1L6Q8NGR2 347 aa8□□□□□ -1.13
VANGL1-205ENST00000474344 ZNF502Q8TBZ5 544 aa8□□□□□ -1.13
VANGL1-205ENST00000474344 ENKURQ8TC29 256 aa8□□□□□ -1.13
VANGL1-205ENST00000474344 VN1R17PQ8TDU5 208 aa8□□□□□ -1.13
VANGL1-205ENST00000474344 DLX4Q92988 240 aaPredicted RBP8□□□□□ -1.13
VANGL1-205ENST00000474344 ZNF414Q96IQ9 312 aa8□□□□□ -1.13
VANGL1-205ENST00000474344 RANGRFQ9HD47 186 aaPredicted RBP8□□□□□ -1.13
VANGL1-205ENST00000474344 PEF1Q9UBV8 284 aaKnown RBP8□□□□□ -1.13
VANGL1-205ENST00000474344 CACFD1Q9UGQ2 172 aa8□□□□□ -1.13
VANGL1-205ENST00000474344 ANKRD34BA5PLL1 514 aa7.99□□□□□ -1.13
VANGL1-205ENST00000474344 FAM90A26D6RGX4 464 aa7.99□□□□□ -1.13
VANGL1-205ENST00000474344 OR8U8P0C7N1 319 aa7.99□□□□□ -1.13
VANGL1-205ENST00000474344 FCGR2BP31994 310 aaPredicted RBP7.99□□□□□ -1.13
VANGL1-205ENST00000474344 SLURP1P55000 103 aa7.99□□□□□ -1.13
VANGL1-205ENST00000474344 DEFA1P59665 94 aa7.99□□□□□ -1.13
VANGL1-205ENST00000474344 DEFA3P59666 94 aa7.99□□□□□ -1.13
VANGL1-205ENST00000474344 ID3Q02535 119 aa7.99□□□□□ -1.13
VANGL1-205ENST00000474344 KLF5Q13887 457 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms