RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 GRPP07492 148 aa15.32■□□□□ 0.04
ECHDC1-214ENST00000474289 SP1P08047 785 aa15.32■□□□□ 0.04
ECHDC1-214ENST00000474289 ZNF766Q5HY98 468 aa15.32■□□□□ 0.04
ECHDC1-214ENST00000474289 AMMECR1LQ6DCA0 310 aa15.32■□□□□ 0.04
ECHDC1-214ENST00000474289 DEFB125Q8N687 156 aa15.32■□□□□ 0.04
ECHDC1-214ENST00000474289 FAM234AQ9H0X4 552 aa15.32■□□□□ 0.04
ECHDC1-214ENST00000474289 CLCF1Q9UBD9 225 aa15.32■□□□□ 0.04
ECHDC1-214ENST00000474289 MUC21A0A0G2JKD1 596 aa15.32■□□□□ 0.04
ECHDC1-214ENST00000474289 MUC21A0A140T8X8 626 aa15.32■□□□□ 0.04
ECHDC1-214ENST00000474289 OR4C46A6NHA9 309 aa15.32■□□□□ 0.04
ECHDC1-214ENST00000474289 WNT9BO14905 357 aa15.32■□□□□ 0.04
ECHDC1-214ENST00000474289 GPR6P46095 362 aaPredicted RBP15.32■□□□□ 0.04
ECHDC1-214ENST00000474289 MFAP2P55001 183 aa15.32■□□□□ 0.04
ECHDC1-214ENST00000474289 RAB31Q13636 194 aa15.32■□□□□ 0.04
ECHDC1-214ENST00000474289 MUC21Q5SSG8 566 aa15.32■□□□□ 0.04
ECHDC1-214ENST00000474289 SAP25Q8TEE9 199 aa15.32■□□□□ 0.04
ECHDC1-214ENST00000474289 FAM216AQ8WUB2 273 aa15.32■□□□□ 0.04
ECHDC1-214ENST00000474289 BCL2L2Q92843 193 aaPredicted RBP15.32■□□□□ 0.04
ECHDC1-214ENST00000474289 TMEM70Q9BUB7 260 aa15.32■□□□□ 0.04
ECHDC1-214ENST00000474289 TCF19Q9Y242 345 aa15.32■□□□□ 0.04
ECHDC1-214ENST00000474289 DNAJC13O75165 2243 aa15.31■□□□□ 0.04
ECHDC1-214ENST00000474289 VHLLQ6RSH7 139 aa15.31■□□□□ 0.04
ECHDC1-214ENST00000474289 RASL11AQ6T310 242 aa15.31■□□□□ 0.04
ECHDC1-214ENST00000474289 OR13A1Q8NGR1 328 aa15.31■□□□□ 0.04
ECHDC1-214ENST00000474289 ST20Q9HBF5 79 aa15.31■□□□□ 0.04
ECHDC1-214ENST00000474289 OR7C2O60412 319 aa15.31■□□□□ 0.04
ECHDC1-214ENST00000474289 ALKBH6Q3KRA9 238 aa15.31■□□□□ 0.04
ECHDC1-214ENST00000474289 OR2Y1Q8NGV0 311 aa15.31■□□□□ 0.04
ECHDC1-214ENST00000474289 PLPPR2Q96GM1 343 aa15.31■□□□□ 0.04
ECHDC1-214ENST00000474289 COMMD5Q9GZQ3 224 aa15.31■□□□□ 0.04
ECHDC1-214ENST00000474289 Q0VFX4 171 aa15.3■□□□□ 0.04
ECHDC1-214ENST00000474289 IL11RAQ14626 422 aa15.3■□□□□ 0.04
ECHDC1-214ENST00000474289 LTC4SQ16873 150 aa15.3■□□□□ 0.04
ECHDC1-214ENST00000474289 SSBP4Q9BWG4 385 aaPredicted RBP15.3■□□□□ 0.04
ECHDC1-214ENST00000474289 TOX4O94842 621 aa15.29■□□□□ 0.04
ECHDC1-214ENST00000474289 IGFBP4P22692 258 aa15.29■□□□□ 0.04
ECHDC1-214ENST00000474289 GPR12P47775 334 aa15.29■□□□□ 0.04
ECHDC1-214ENST00000474289 PRR27Q6MZM9 219 aa15.29■□□□□ 0.04
ECHDC1-214ENST00000474289 NABP2Q9BQ15 211 aa15.29■□□□□ 0.04
ECHDC1-214ENST00000474289 PLEKHA3Q9HB20 300 aa15.29■□□□□ 0.04
ECHDC1-214ENST00000474289 ZNF355PQ9NSJ1 428 aa15.29■□□□□ 0.04
ECHDC1-214ENST00000474289 LOC102724200A0A096LPH7 203 aaPredicted RBP15.29■□□□□ 0.04
ECHDC1-214ENST00000474289 hDV102S1A0JD36 115 aa15.29■□□□□ 0.04
ECHDC1-214ENST00000474289 ERVK-16P61578 105 aa15.29■□□□□ 0.04
ECHDC1-214ENST00000474289 FAM120AOSQ5T036 256 aa15.29■□□□□ 0.04
ECHDC1-214ENST00000474289 CXorf67Q86X51 503 aaPredicted RBP15.29■□□□□ 0.04
ECHDC1-214ENST00000474289 NUP35Q8NFH5 326 aa15.29■□□□□ 0.04
ECHDC1-214ENST00000474289 URB1-AS1Q96HZ7 61 aa15.29■□□□□ 0.04
ECHDC1-214ENST00000474289 ZNF576Q9H609 170 aa15.29■□□□□ 0.04
ECHDC1-214ENST00000474289 TMEM140Q9NV12 185 aa15.29■□□□□ 0.04
ECHDC1-214ENST00000474289 TRGV8A0A0C4DH27 118 aa15.28■□□□□ 0.04
ECHDC1-214ENST00000474289 GAGE12BA1L429 117 aa15.28■□□□□ 0.04
ECHDC1-214ENST00000474289 SH2D7A6NKC9 451 aaPredicted RBP15.28■□□□□ 0.04
ECHDC1-214ENST00000474289 CRXO43186 299 aaPredicted RBP15.28■□□□□ 0.04
ECHDC1-214ENST00000474289 DUSP3P51452 185 aaPredicted RBP15.28■□□□□ 0.04
ECHDC1-214ENST00000474289 ZNF826PQ6ZT77 177 aa15.28■□□□□ 0.04
ECHDC1-214ENST00000474289 OR2T6Q8NHC8 308 aa15.28■□□□□ 0.04
ECHDC1-214ENST00000474289 C21orf140B9A014 251 aa15.28■□□□□ 0.04
ECHDC1-214ENST00000474289 GATA2P23769 480 aaPredicted RBP15.28■□□□□ 0.04
ECHDC1-214ENST00000474289 PSG9Q00887 426 aa15.28■□□□□ 0.04
ECHDC1-214ENST00000474289 MBD6Q96DN6 1003 aa15.28■□□□□ 0.04
ECHDC1-214ENST00000474289 MRPS17Q9Y2R5 130 aaKnown RBP15.28■□□□□ 0.04
ECHDC1-214ENST00000474289 K7ERU9 68 aa15.27■□□□□ 0.04
ECHDC1-214ENST00000474289 M0R1X1 148 aa15.27■□□□□ 0.04
ECHDC1-214ENST00000474289 OR2J3O76001 311 aa15.27■□□□□ 0.04
ECHDC1-214ENST00000474289 CELA3AP09093 270 aa15.27■□□□□ 0.04
ECHDC1-214ENST00000474289 SLC25A34Q6PIV7 304 aa15.27■□□□□ 0.04
ECHDC1-214ENST00000474289 MDP1Q86V88 176 aa15.27■□□□□ 0.04
ECHDC1-214ENST00000474289 SPEM1Q8N4L4 309 aa15.27■□□□□ 0.04
ECHDC1-214ENST00000474289 LINC00479Q96M42 142 aa15.27■□□□□ 0.04
ECHDC1-214ENST00000474289 DCTN5Q9BTE1 182 aa15.27■□□□□ 0.04
ECHDC1-214ENST00000474289 FOLR3P41439 243 aa15.27■□□□□ 0.03
ECHDC1-214ENST00000474289 PRR31Q5SQ13 230 aa15.27■□□□□ 0.03
ECHDC1-214ENST00000474289 NUDT11Q96G61 164 aa15.27■□□□□ 0.03
ECHDC1-214ENST00000474289 METRNQ9UJH8 293 aa15.27■□□□□ 0.03
ECHDC1-214ENST00000474289 TMEM238C9JI98 176 aa15.26■□□□□ 0.03
ECHDC1-214ENST00000474289 PLGLB1Q02325 96 aa15.26■□□□□ 0.03
ECHDC1-214ENST00000474289 C12orf54Q6X4T0 127 aa15.26■□□□□ 0.03
ECHDC1-214ENST00000474289 TRIB1Q96RU8 372 aa15.26■□□□□ 0.03
ECHDC1-214ENST00000474289 NCOR1P1Q9H4R4 102 aa15.26■□□□□ 0.03
ECHDC1-214ENST00000474289 K7ESF4 209 aa15.26■□□□□ 0.03
ECHDC1-214ENST00000474289 CAMPP49913 170 aa15.26■□□□□ 0.03
ECHDC1-214ENST00000474289 RPL39P5Q59GN2 51 aa15.26■□□□□ 0.03
ECHDC1-214ENST00000474289 LINC00173Q6ZV60 143 aa15.26■□□□□ 0.03
ECHDC1-214ENST00000474289 SNRNP40Q96DI7 357 aaKnown RBP15.26■□□□□ 0.03
ECHDC1-214ENST00000474289 OR2V2Q96R30 315 aa15.26■□□□□ 0.03
ECHDC1-214ENST00000474289 TRAV8-6A0A0B4J262 113 aa15.25■□□□□ 0.03
ECHDC1-214ENST00000474289 A0A1W2PRE2 83 aa15.25■□□□□ 0.03
ECHDC1-214ENST00000474289 SYS1-DBNDD2H3BUS1 97 aa15.25■□□□□ 0.03
ECHDC1-214ENST00000474289 FAM71F2Q6NXP2 309 aa15.25■□□□□ 0.03
ECHDC1-214ENST00000474289 MOB3BQ86TA1 216 aa15.25■□□□□ 0.03
ECHDC1-214ENST00000474289 C15orf61A6NNL5 157 aa15.25■□□□□ 0.03
ECHDC1-214ENST00000474289 C15orf65H3BRN8 121 aa15.25■□□□□ 0.03
ECHDC1-214ENST00000474289 C1RLQ9NZP8 487 aa15.25■□□□□ 0.03
ECHDC1-214ENST00000474289 DUSP13Q9UII6 198 aa15.25■□□□□ 0.03
ECHDC1-214ENST00000474289 IGKV1OR2-108A0A075B7D4 117 aa15.24■□□□□ 0.03
ECHDC1-214ENST00000474289 J3QR06 171 aa15.24■□□□□ 0.03
ECHDC1-214ENST00000474289 SPINT2O43291 252 aa15.24■□□□□ 0.03
ECHDC1-214ENST00000474289 SMPD2O60906 423 aa15.24■□□□□ 0.03
ECHDC1-214ENST00000474289 MEGF9Q9H1U4 602 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms