RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 C12orf77C9JDV5 145 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 TRAPPC2LH3BP13 241 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 C15orf65H3BRN8 121 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 K7ENP7 123 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 K7EPK0 472 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 L7N2F9 121 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 M0R1B8 84 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 CDIPTO14735 213 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 HSD17B6O14756 317 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 DEGS1O15121 323 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 SLC31A2O15432 143 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 TIMM8AO60220 97 aaPredicted RBP1.04□□□□□ -2.24
CCDC39-203ENST00000473854 NOS1APO75052 506 aaPredicted RBP1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF737O75373 536 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 CLN5O75503 358 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 RP2O75695 350 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 SCO1O75880 301 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 SLC22A5O76082 557 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 S1PR2O95136 353 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 TMEM50AO95807 157 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 OR2H2O95918 312 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 HAND1O96004 215 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 CYB5R3P00387 301 aaPredicted RBP1.04□□□□□ -2.24
CCDC39-203ENST00000473854 PPYP01298 95 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 IGKV1-39P01597 117 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 IGKV1-5P01602 117 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 IGKV1D-39P04432 117 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 WNT2P09544 360 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF728P0DKX0 622 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 OR5H8P0DN80 308 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 IGHV3-43DP0DP04 118 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 RRASP10301 218 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 PSG2P11465 335 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 SLC25A4P12235 298 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 PGAM2P15259 253 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF44P15621 663 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF250P15622 560 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 RPA2P15927 270 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 CBR1P16152 277 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 AKR1C4P17516 323 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 HLA-GP17693 338 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ADCYAP1P18509 176 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 KITLGP21583 273 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 NFYAP23511 347 aaPredicted RBP1.04□□□□□ -2.24
CCDC39-203ENST00000473854 IL32P24001 234 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 UCP1P25874 307 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 LOXP28300 417 aaPredicted RBP1.04□□□□□ -2.24
CCDC39-203ENST00000473854 GNRHRP30968 328 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 S100A11P31949 105 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ARR3P36575 388 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 PMELP40967 661 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 CD200P41217 278 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 GUCA1AP43080 201 aaPredicted RBP1.04□□□□□ -2.24
CCDC39-203ENST00000473854 CBX5P45973 191 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 FHITP49789 147 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF83P51522 516 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 AP2S1P53680 142 aaPredicted RBP1.04□□□□□ -2.24
CCDC39-203ENST00000473854 UCP2P55851 309 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 PIGPP57054 158 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 TAS2R31P59538 309 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 TAS2R46P59540 309 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ARPC4P59998 168 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 S100A10P60903 97 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 UBE2NP61088 152 aaKnown RBP1.04□□□□□ -2.24
CCDC39-203ENST00000473854 RND3P61587 244 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 RPL30P62888 115 aaKnown RBP1.04□□□□□ -2.24
CCDC39-203ENST00000473854 UBA52P62987 128 aaKnown RBP1.04□□□□□ -2.24
CCDC39-203ENST00000473854 GNG3P63215 75 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 IL24Q13007 206 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 EIF4EBP1Q13541 118 aaPredicted RBP1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF345Q14585 488 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 AANATQ16613 207 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 MPV17LQ2QL34 196 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 CEACAM21Q3KPI0 293 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 SP6Q3SY56 376 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 CHRFAM7AQ494W8 412 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 PAN3Q58A45 887 aaKnown RBP1.04□□□□□ -2.24
CCDC39-203ENST00000473854 NMSQ5H8A3 153 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 CLLU1Q5K131 121 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 STUMQ69YW2 141 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ELP2Q6IA86 826 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 OR2A2Q6IF42 318 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 FAHD2BQ6P2I3 314 aaPredicted RBP1.04□□□□□ -2.24
CCDC39-203ENST00000473854 C11orf88Q6PI97 169 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 TEX261Q6UWH6 196 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ALKAL2Q6UX46 152 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ACP7Q6ZNF0 438 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF818PQ6ZRF7 136 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF767PQ75MW2 155 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 KCTD9Q7L273 389 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 MOB1BQ7L9L4 216 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 LYZL2Q7Z4W2 148 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 DPPA2Q7Z7J5 298 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 LINC00596Q86U02 117 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 COMMD7Q86VX2 200 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 DOLPP1Q86YN1 238 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 CCDC36Q8IYA8 594 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 SAXO1Q8IYX7 474 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 SLC38A6Q8IZM9 456 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 SELENOHQ8IZQ5 122 aaKnown RBP1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms