RNA–Protein interactions for RNA: ENST00000473322.1

CCDC66-215, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-215ENST00000473322 RPP25LQ8N5L8 163 aaKnown RBP2.37□□□□□ -2.03
CCDC66-215ENST00000473322 Q8NDZ9 215 aa2.37□□□□□ -2.03
CCDC66-215ENST00000473322 NEK7Q8TDX7 302 aa2.37□□□□□ -2.03
CCDC66-215ENST00000473322 RASSF5Q8WWW0 418 aa2.37□□□□□ -2.03
CCDC66-215ENST00000473322 SELENOSQ9BQE4 189 aa2.37□□□□□ -2.03
CCDC66-215ENST00000473322 OR8D2Q9GZM6 311 aa2.37□□□□□ -2.03
CCDC66-215ENST00000473322 C11orf68Q9H3H3 251 aaKnown RBP2.37□□□□□ -2.03
CCDC66-215ENST00000473322 SMPXQ9UHP9 88 aa2.37□□□□□ -2.03
CCDC66-215ENST00000473322 RBM7Q9Y580 266 aaKnown RBP2.37□□□□□ -2.03
CCDC66-215ENST00000473322 CACNA1DQ01668 2161 aa2.37□□□□□ -2.03
CCDC66-215ENST00000473322 TRBV19A0A075B6N1 114 aa2.36□□□□□ -2.03
CCDC66-215ENST00000473322 ZNF73O43830 326 aaPredicted RBP2.36□□□□□ -2.03
CCDC66-215ENST00000473322 ATG12O94817 140 aa2.36□□□□□ -2.03
CCDC66-215ENST00000473322 MSNP26038 577 aaKnown RBP2.36□□□□□ -2.03
CCDC66-215ENST00000473322 ERP29P30040 261 aaKnown RBP2.36□□□□□ -2.03
CCDC66-215ENST00000473322 ZNF90Q03938 601 aa2.36□□□□□ -2.03
CCDC66-215ENST00000473322 FOXF1Q12946 379 aa2.36□□□□□ -2.03
CCDC66-215ENST00000473322 MOGQ16653 247 aa2.36□□□□□ -2.03
CCDC66-215ENST00000473322 FAM172AQ8WUF8 416 aa2.36□□□□□ -2.03
CCDC66-215ENST00000473322 SH3BGRL3Q9H299 93 aa2.36□□□□□ -2.03
CCDC66-215ENST00000473322 NDUFB11Q9NX14 153 aa2.36□□□□□ -2.03
CCDC66-215ENST00000473322 HHLA3Q9XRX5 114 aa2.36□□□□□ -2.03
CCDC66-215ENST00000473322 SLIT2O94813 1529 aa2.36□□□□□ -2.03
CCDC66-215ENST00000473322 HECW2Q9P2P5 1572 aa2.36□□□□□ -2.03
CCDC66-215ENST00000473322 SIPA1L1O43166 1804 aa2.35□□□□□ -2.03
CCDC66-215ENST00000473322 TRAV7A0A075B6U4 112 aa2.35□□□□□ -2.03
CCDC66-215ENST00000473322 IGKV1D-43A0A0B4J1Z2 117 aa2.35□□□□□ -2.03
CCDC66-215ENST00000473322 TRAV4A0A0B4J268 109 aa2.35□□□□□ -2.03
CCDC66-215ENST00000473322 GGT3PA6NGU5 568 aa2.35□□□□□ -2.03
CCDC66-215ENST00000473322 SIGLEC16A6NMB1 481 aa2.35□□□□□ -2.03
CCDC66-215ENST00000473322 AIPO00170 330 aa2.35□□□□□ -2.03
CCDC66-215ENST00000473322 FABP1P07148 127 aa2.35□□□□□ -2.03
CCDC66-215ENST00000473322 LGALS1P09382 135 aaKnown RBP2.35□□□□□ -2.03
CCDC66-215ENST00000473322 TFPTP0C1Z6 253 aa2.35□□□□□ -2.03
CCDC66-215ENST00000473322 SPI1P17947 270 aa2.35□□□□□ -2.03
CCDC66-215ENST00000473322 ZNF80P51504 273 aaPredicted RBP2.35□□□□□ -2.03
CCDC66-215ENST00000473322 FXYD2P54710 66 aa2.35□□□□□ -2.03
CCDC66-215ENST00000473322 RAB14P61106 215 aa2.35□□□□□ -2.03
CCDC66-215ENST00000473322 ZNF705AQ6ZN79 300 aaPredicted RBP2.35□□□□□ -2.03
CCDC66-215ENST00000473322 OR5C1Q8NGR4 320 aa2.35□□□□□ -2.03
CCDC66-215ENST00000473322 FGF13Q92913 245 aa2.35□□□□□ -2.03
CCDC66-215ENST00000473322 MRPS24Q96EL2 167 aaKnown RBP2.35□□□□□ -2.03
CCDC66-215ENST00000473322 DNAJC30Q96LL9 226 aa2.35□□□□□ -2.03
CCDC66-215ENST00000473322 IMMP2LQ96T52 175 aa2.35□□□□□ -2.03
CCDC66-215ENST00000473322 CHST6Q9GZX3 395 aa2.35□□□□□ -2.03
CCDC66-215ENST00000473322 GID8Q9NWU2 228 aa2.35□□□□□ -2.03
CCDC66-215ENST00000473322 PRO2289Q9P1D8 64 aa2.35□□□□□ -2.03
CCDC66-215ENST00000473322 TIMM9Q9Y5J7 89 aa2.35□□□□□ -2.03
CCDC66-215ENST00000473322 FMN1Q68DA7 1419 aa2.34□□□□□ -2.03
CCDC66-215ENST00000473322 VPS37CA5D8V6 355 aaPredicted RBP2.34□□□□□ -2.03
CCDC66-215ENST00000473322 LY6LH3BQJ8 138 aa2.34□□□□□ -2.03
CCDC66-215ENST00000473322 PGRMC1O00264 195 aaKnown RBP2.34□□□□□ -2.03
CCDC66-215ENST00000473322 OR2J2O76002 312 aa2.34□□□□□ -2.03
CCDC66-215ENST00000473322 S1PR2O95136 353 aa2.34□□□□□ -2.03
CCDC66-215ENST00000473322 G0S2P27469 103 aa2.34□□□□□ -2.03
CCDC66-215ENST00000473322 EVX1P49640 407 aa2.34□□□□□ -2.03
CCDC66-215ENST00000473322 ARHGAP11BQ3KRB8 267 aa2.34□□□□□ -2.03
CCDC66-215ENST00000473322 TRIQKQ629K1 86 aa2.34□□□□□ -2.03
CCDC66-215ENST00000473322 AGTRAPQ6RW13 159 aa2.34□□□□□ -2.03
CCDC66-215ENST00000473322 GINS3Q9BRX5 216 aa2.34□□□□□ -2.03
CCDC66-215ENST00000473322 IMUPQ9GZP8 106 aa2.34□□□□□ -2.03
CCDC66-215ENST00000473322 LYRM2Q9NU23 88 aaPredicted RBP2.34□□□□□ -2.03
CCDC66-215ENST00000473322 PRNDQ9UKY0 176 aa2.34□□□□□ -2.03
CCDC66-215ENST00000473322 CYSLTR1Q9Y271 337 aa2.34□□□□□ -2.03
CCDC66-215ENST00000473322 NYNRINQ9P2P1 1898 aaKnown RBP2.34□□□□□ -2.03
CCDC66-215ENST00000473322 IGKV3D-11A0A0A0MRZ8 115 aa2.33□□□□□ -2.04
CCDC66-215ENST00000473322 H7C2G1 150 aa2.33□□□□□ -2.04
CCDC66-215ENST00000473322 BPGMP07738 259 aa2.33□□□□□ -2.04
CCDC66-215ENST00000473322 HLA-DMBP28068 263 aa2.33□□□□□ -2.04
CCDC66-215ENST00000473322 RPL28P46779 137 aaKnown RBP2.33□□□□□ -2.04
CCDC66-215ENST00000473322 CRYBA4P53673 196 aa2.33□□□□□ -2.04
CCDC66-215ENST00000473322 TCTAP57738 103 aa2.33□□□□□ -2.04
CCDC66-215ENST00000473322 GNG3P63215 75 aa2.33□□□□□ -2.04
CCDC66-215ENST00000473322 MEF2BQ02080 365 aaPredicted RBP2.33□□□□□ -2.04
CCDC66-215ENST00000473322 AKR1C8PQ5T2L2 129 aa2.33□□□□□ -2.04
CCDC66-215ENST00000473322 SLC35E3Q7Z769 313 aa2.33□□□□□ -2.04
CCDC66-215ENST00000473322 C10orf126Q8N4M7 172 aa2.33□□□□□ -2.04
CCDC66-215ENST00000473322 OR13C6PQ8NH95 151 aa2.33□□□□□ -2.04
CCDC66-215ENST00000473322 TERB2Q8NHR7 220 aa2.33□□□□□ -2.04
CCDC66-215ENST00000473322 TMEM70Q9BUB7 260 aa2.33□□□□□ -2.04
CCDC66-215ENST00000473322 CXCL16Q9H2A7 254 aa2.33□□□□□ -2.04
CCDC66-215ENST00000473322 BIN3Q9NQY0 253 aa2.33□□□□□ -2.04
CCDC66-215ENST00000473322 TP73-AS1Q9UF72 201 aa2.33□□□□□ -2.04
CCDC66-215ENST00000473322 TIMM22Q9Y584 194 aa2.33□□□□□ -2.04
CCDC66-215ENST00000473322 TONSLQ96HA7 1378 aa2.33□□□□□ -2.04
CCDC66-215ENST00000473322 ZNF407Q9C0G0 2248 aa2.33□□□□□ -2.04
CCDC66-215ENST00000473322 PPP5D1E7EU14 171 aa2.32□□□□□ -2.04
CCDC66-215ENST00000473322 SLC22A1O15245 554 aa2.32□□□□□ -2.04
CCDC66-215ENST00000473322 RPS4Y1P22090 263 aaKnown RBP2.32□□□□□ -2.04
CCDC66-215ENST00000473322 YPEL3P61236 119 aaPredicted RBP2.32□□□□□ -2.04
CCDC66-215ENST00000473322 TFAMQ00059 246 aaKnown RBP2.32□□□□□ -2.04
CCDC66-215ENST00000473322 SS18Q15532 418 aa2.32□□□□□ -2.04
CCDC66-215ENST00000473322 GRINAQ7Z429 371 aa2.32□□□□□ -2.04
CCDC66-215ENST00000473322 C11orf40Q8WZ69 217 aa2.32□□□□□ -2.04
CCDC66-215ENST00000473322 ZHX1-C8orf76Q96EF9 292 aa2.32□□□□□ -2.04
CCDC66-215ENST00000473322 SCGB3A1Q96QR1 104 aa2.32□□□□□ -2.04
CCDC66-215ENST00000473322 HOPXQ9BPY8 73 aaPredicted RBP2.32□□□□□ -2.04
CCDC66-215ENST00000473322 PBOV1Q9GZY1 135 aa2.32□□□□□ -2.04
CCDC66-215ENST00000473322 TMEM133Q9H2Q1 129 aa2.32□□□□□ -2.04
CCDC66-215ENST00000473322 TRABDQ9H4I3 376 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms