RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ZNF253O75346 499 aa10.29□□□□□ -0.76
USP11-206ENST00000469080 CBLN1P23435 193 aa10.29□□□□□ -0.76
USP11-206ENST00000469080 DLX1P56177 255 aa10.29□□□□□ -0.76
USP11-206ENST00000469080 STUMQ69YW2 141 aa10.29□□□□□ -0.76
USP11-206ENST00000469080 WDR86Q86TI4 376 aa10.29□□□□□ -0.76
USP11-206ENST00000469080 FGFRL1Q8N441 504 aa10.29□□□□□ -0.76
USP11-206ENST00000469080 GALMQ96C23 342 aa10.29□□□□□ -0.76
USP11-206ENST00000469080 NAA38Q9BRA0 125 aaKnown RBP10.29□□□□□ -0.76
USP11-206ENST00000469080 MPC1Q9Y5U8 109 aa10.29□□□□□ -0.76
USP11-206ENST00000469080 SPENQ96T58 3664 aaKnown RBP10.29□□□□□ -0.76
USP11-206ENST00000469080 ADAMTS20P59510 1910 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 PPIAL4EA0A075B759 164 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 PPIAL4CA0A0B4J2A2 164 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 PPIAL4DF5H284 164 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 PPIAL4FP0DN26 164 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 LHFPL1Q86WI0 220 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 OR8G5Q8NG78 346 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 SNRNP40Q96DI7 357 aaKnown RBP10.28□□□□□ -0.76
USP11-206ENST00000469080 ZNRD1Q9P1U0 126 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 OR51B2Q9Y5P1 312 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 FBLL1A6NHQ2 334 aaKnown RBP10.28□□□□□ -0.76
USP11-206ENST00000469080 IFNA1P01562 189 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 IFNA5P01569 189 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 SPRNQ5BIV9 151 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 TMEM211Q6ICI0 200 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 Q6ZT83 130 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 ASCL5Q7RTU5 278 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 GNPNAT1Q96EK6 184 aaPredicted RBP10.28□□□□□ -0.76
USP11-206ENST00000469080 DYNLRB1Q9NP97 96 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 TUBD1Q9UJT1 453 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 PXMP4Q9Y6I8 212 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 USP9XQ93008 2570 aaPredicted RBP10.28□□□□□ -0.76
USP11-206ENST00000469080 IGKV3D-15A0A087WSY6 115 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 TMPRSS2O15393 492 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 GYPAP02724 150 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 BOD1L2Q8IYS8 172 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 TMEM45BQ96B21 275 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 BORCS7Q96B45 105 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 C10orf35Q96D05 121 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 CCL13Q99616 98 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 HIF1ANQ9NWT6 349 aa10.28□□□□□ -0.76
USP11-206ENST00000469080 A0A0G2JRQ6 117 aa10.27□□□□□ -0.76
USP11-206ENST00000469080 UBE2L5PA0A1B0GUS4 154 aa10.27□□□□□ -0.76
USP11-206ENST00000469080 PGLYRP1O75594 196 aaPredicted RBP10.27□□□□□ -0.76
USP11-206ENST00000469080 PRB4P10163 310 aaPredicted RBP10.27□□□□□ -0.76
USP11-206ENST00000469080 DUX4L9Q6RFH8 374 aaPredicted RBP10.27□□□□□ -0.76
USP11-206ENST00000469080 CYP2G1PQ6ZSU1 146 aa10.27□□□□□ -0.76
USP11-206ENST00000469080 SPIN2AQ99865 258 aa10.27□□□□□ -0.76
USP11-206ENST00000469080 SPIN2BQ9BPZ2 258 aa10.27□□□□□ -0.76
USP11-206ENST00000469080 MRPL27Q9P0M9 148 aaKnown RBP10.27□□□□□ -0.76
USP11-206ENST00000469080 PCSK5Q92824 1860 aa10.27□□□□□ -0.77
USP11-206ENST00000469080 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.27□□□□□ -0.77
USP11-206ENST00000469080 ACSF3Q4G176 576 aaPredicted RBP10.27□□□□□ -0.77
USP11-206ENST00000469080 OR4F5Q8NH21 305 aa10.27□□□□□ -0.77
USP11-206ENST00000469080 OR4F4Q96R69 305 aa10.27□□□□□ -0.77
USP11-206ENST00000469080 OR2W1Q9Y3N9 320 aa10.27□□□□□ -0.77
USP11-206ENST00000469080 MLNRO43193 412 aa10.27□□□□□ -0.77
USP11-206ENST00000469080 IGHV3-48P01763 117 aa10.27□□□□□ -0.77
USP11-206ENST00000469080 HBZP02008 142 aa10.27□□□□□ -0.77
USP11-206ENST00000469080 STAG3L2P0CL84 134 aa10.27□□□□□ -0.77
USP11-206ENST00000469080 Q56UQ5 140 aa10.27□□□□□ -0.77
USP11-206ENST00000469080 FOXL2NBQ6ZUU3 175 aa10.27□□□□□ -0.77
USP11-206ENST00000469080 PNKDQ8N490 385 aa10.27□□□□□ -0.77
USP11-206ENST00000469080 OR10G4Q8NGN3 311 aa10.27□□□□□ -0.77
USP11-206ENST00000469080 MRPL30Q8TCC3 161 aaKnown RBP10.27□□□□□ -0.77
USP11-206ENST00000469080 ANAPC16Q96DE5 110 aa10.27□□□□□ -0.77
USP11-206ENST00000469080 LINC00470Q9BZP3 86 aa10.27□□□□□ -0.77
USP11-206ENST00000469080 PSENENQ9NZ42 101 aa10.27□□□□□ -0.77
USP11-206ENST00000469080 ABCA12Q86UK0 2595 aa10.26□□□□□ -0.77
USP11-206ENST00000469080 MYO9AB2RTY4 2548 aa10.26□□□□□ -0.77
USP11-206ENST00000469080 IGSF23A1L1A6 192 aa10.26□□□□□ -0.77
USP11-206ENST00000469080 LYNX1G3V0Z9 82 aa10.26□□□□□ -0.77
USP11-206ENST00000469080 PDE6DO43924 150 aa10.26□□□□□ -0.77
USP11-206ENST00000469080 ZNF737O75373 536 aa10.26□□□□□ -0.77
USP11-206ENST00000469080 LYNX1P0DP58 116 aa10.26□□□□□ -0.77
USP11-206ENST00000469080 SRP14P37108 136 aaKnown RBP10.26□□□□□ -0.77
USP11-206ENST00000469080 TCF15Q12870 199 aa10.26□□□□□ -0.77
USP11-206ENST00000469080 FAM19A2Q8N3H0 131 aa10.26□□□□□ -0.77
USP11-206ENST00000469080 OR5B3Q8NH48 314 aa10.26□□□□□ -0.77
USP11-206ENST00000469080 SGMS2Q8NHU3 365 aa10.26□□□□□ -0.77
USP11-206ENST00000469080 PLEKHF2Q9H8W4 249 aa10.26□□□□□ -0.77
USP11-206ENST00000469080 PEF1Q9UBV8 284 aaKnown RBP10.26□□□□□ -0.77
USP11-206ENST00000469080 PRR33A8MZF0 331 aa10.26□□□□□ -0.77
USP11-206ENST00000469080 RPL15P61313 204 aaKnown RBP10.26□□□□□ -0.77
USP11-206ENST00000469080 OR13A1Q8NGR1 328 aa10.26□□□□□ -0.77
USP11-206ENST00000469080 UHRF2Q96PU4 802 aa10.26□□□□□ -0.77
USP11-206ENST00000469080 TP53TG3Q9ULZ0 132 aa10.26□□□□□ -0.77
USP11-206ENST00000469080 LRP5LA4QPB2 252 aa10.26□□□□□ -0.77
USP11-206ENST00000469080 C3orf79P0CE67 100 aa10.26□□□□□ -0.77
USP11-206ENST00000469080 GPR6P46095 362 aaPredicted RBP10.26□□□□□ -0.77
USP11-206ENST00000469080 IL13RA2Q14627 380 aa10.26□□□□□ -0.77
USP11-206ENST00000469080 TMEM171Q8WVE6 324 aa10.26□□□□□ -0.77
USP11-206ENST00000469080 KBTBD11O94819 623 aa10.25□□□□□ -0.77
USP11-206ENST00000469080 IGLC1P0CG04 106 aa10.25□□□□□ -0.77
USP11-206ENST00000469080 SCGB1A1P11684 91 aa10.25□□□□□ -0.77
USP11-206ENST00000469080 F2RP25116 425 aa10.25□□□□□ -0.77
USP11-206ENST00000469080 GPR12P47775 334 aa10.25□□□□□ -0.77
USP11-206ENST00000469080 TMEM42Q69YG0 159 aa10.25□□□□□ -0.77
USP11-206ENST00000469080 MUC15Q8N387 334 aa10.25□□□□□ -0.77
USP11-206ENST00000469080 PRSS33Q8NF86 280 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms