RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 A0A1B0GX78 115 aa0.35□□□□□ -2.35
SMC4-207ENST00000467263 EVPLLA8MZ36 301 aa0.35□□□□□ -2.35
SMC4-207ENST00000467263 OR2T1O43869 369 aa0.35□□□□□ -2.35
SMC4-207ENST00000467263 BLVRAP53004 296 aa0.35□□□□□ -2.35
SMC4-207ENST00000467263 SKP1P63208 163 aa0.35□□□□□ -2.35
SMC4-207ENST00000467263 STX5Q13190 355 aa0.35□□□□□ -2.35
SMC4-207ENST00000467263 CLEC6AQ6EIG7 209 aa0.35□□□□□ -2.35
SMC4-207ENST00000467263 C1orf158Q8N1D5 194 aa0.35□□□□□ -2.35
SMC4-207ENST00000467263 Q8N814 137 aa0.35□□□□□ -2.35
SMC4-207ENST00000467263 OR2T4Q8NH00 348 aa0.35□□□□□ -2.35
SMC4-207ENST00000467263 CMTM5Q96DZ9 223 aa0.35□□□□□ -2.35
SMC4-207ENST00000467263 SNRNP200O75643 2136 aaKnown RBP0.35□□□□□ -2.35
SMC4-207ENST00000467263 CEP192Q8TEP8 1941 aa0.34□□□□□ -2.35
SMC4-207ENST00000467263 TRBV20OR9-2A0A075B6H5 130 aa0.34□□□□□ -2.36
SMC4-207ENST00000467263 C2orf70A6NJV1 201 aa0.34□□□□□ -2.36
SMC4-207ENST00000467263 HYPMO75409 117 aa0.34□□□□□ -2.36
SMC4-207ENST00000467263 CTSDP07339 412 aaPredicted RBP0.34□□□□□ -2.36
SMC4-207ENST00000467263 HTR1AP08908 422 aa0.34□□□□□ -2.36
SMC4-207ENST00000467263 ASAH2BP0C7U1 165 aa0.34□□□□□ -2.36
SMC4-207ENST00000467263 CRYGAP11844 174 aa0.34□□□□□ -2.36
SMC4-207ENST00000467263 SPI1P17947 270 aa0.34□□□□□ -2.36
SMC4-207ENST00000467263 GUK1Q16774 197 aa0.34□□□□□ -2.36
SMC4-207ENST00000467263 COQ5Q5HYK3 327 aa0.34□□□□□ -2.36
SMC4-207ENST00000467263 AADACL3Q5VUY0 350 aa0.34□□□□□ -2.36
SMC4-207ENST00000467263 Q6ZQT0 140 aa0.34□□□□□ -2.36
SMC4-207ENST00000467263 PLEKHG7Q6ZR37 379 aa0.34□□□□□ -2.36
SMC4-207ENST00000467263 OOSP2Q86WS3 158 aa0.34□□□□□ -2.36
SMC4-207ENST00000467263 LINC00311Q8N616 119 aa0.34□□□□□ -2.36
SMC4-207ENST00000467263 DEFB125Q8N687 156 aa0.34□□□□□ -2.36
SMC4-207ENST00000467263 OR4D11Q8NGI4 311 aa0.34□□□□□ -2.36
SMC4-207ENST00000467263 RASSF5Q8WWW0 418 aa0.34□□□□□ -2.36
SMC4-207ENST00000467263 CNBD2Q96M20 576 aa0.34□□□□□ -2.36
SMC4-207ENST00000467263 CKLFQ9UBR5 152 aa0.34□□□□□ -2.36
SMC4-207ENST00000467263 CCL20P78556 96 aa0.33□□□□□ -2.36
SMC4-207ENST00000467263 KCNJ8Q15842 424 aa0.33□□□□□ -2.36
SMC4-207ENST00000467263 GPR32P1Q8NGA4 272 aa0.33□□□□□ -2.36
SMC4-207ENST00000467263 DERL1Q9BUN8 251 aa0.33□□□□□ -2.36
SMC4-207ENST00000467263 CNTRLQ7Z7A1 2325 aa0.33□□□□□ -2.36
SMC4-207ENST00000467263 INMT-MINDY4F8WBC2 141 aa0.32□□□□□ -2.36
SMC4-207ENST00000467263 ACOX3O15254 700 aa0.32□□□□□ -2.36
SMC4-207ENST00000467263 OR1I1O60431 355 aa0.32□□□□□ -2.36
SMC4-207ENST00000467263 COX5BP10606 129 aa0.32□□□□□ -2.36
SMC4-207ENST00000467263 MLLT11Q13015 90 aaPredicted RBP0.32□□□□□ -2.36
SMC4-207ENST00000467263 GRK1Q15835 563 aa0.32□□□□□ -2.36
SMC4-207ENST00000467263 BPIFA4PQ86YQ2 179 aa0.32□□□□□ -2.36
SMC4-207ENST00000467263 ZNF418Q8TF45 676 aaPredicted RBP0.32□□□□□ -2.36
SMC4-207ENST00000467263 SCGB3A1Q96QR1 104 aa0.32□□□□□ -2.36
SMC4-207ENST00000467263 TRAV1-1A0A0B4J248 108 aa0.31□□□□□ -2.36
SMC4-207ENST00000467263 MARCKSL1P49006 195 aa0.31□□□□□ -2.36
SMC4-207ENST00000467263 RAB4BP61018 213 aa0.31□□□□□ -2.36
SMC4-207ENST00000467263 CLVS2Q5SYC1 327 aa0.31□□□□□ -2.36
SMC4-207ENST00000467263 GDF5OSQ5U4N7 250 aa0.31□□□□□ -2.36
SMC4-207ENST00000467263 PHF13Q86YI8 300 aaPredicted RBP0.31□□□□□ -2.36
SMC4-207ENST00000467263 PFN4Q8NHR9 129 aa0.31□□□□□ -2.36
SMC4-207ENST00000467263 MCFD2Q8NI22 146 aa0.31□□□□□ -2.36
SMC4-207ENST00000467263 KLK6Q92876 244 aa0.31□□□□□ -2.36
SMC4-207ENST00000467263 ATP6V1G3Q96LB4 118 aa0.31□□□□□ -2.36
SMC4-207ENST00000467263 AMELYQ99218 206 aa0.31□□□□□ -2.36
SMC4-207ENST00000467263 GINS4Q9BRT9 223 aa0.31□□□□□ -2.36
SMC4-207ENST00000467263 WDR61Q9GZS3 305 aaKnown RBP0.31□□□□□ -2.36
SMC4-207ENST00000467263 C3orf18Q9UK00 162 aa0.31□□□□□ -2.36
SMC4-207ENST00000467263 CXCR6O00574 342 aa0.3□□□□□ -2.36
SMC4-207ENST00000467263 C8orf88P0DMB2 117 aa0.3□□□□□ -2.36
SMC4-207ENST00000467263 RPS12P25398 132 aaKnown RBP0.3□□□□□ -2.36
SMC4-207ENST00000467263 PDE6HQ13956 83 aa0.3□□□□□ -2.36
SMC4-207ENST00000467263 SPATA8Q6RVD6 105 aa0.3□□□□□ -2.36
SMC4-207ENST00000467263 CLVS1Q8IUQ0 354 aaPredicted RBP0.3□□□□□ -2.36
SMC4-207ENST00000467263 IQCF2Q8IXL9 164 aa0.3□□□□□ -2.36
SMC4-207ENST00000467263 TMEM147Q9BVK8 224 aa0.3□□□□□ -2.36
SMC4-207ENST00000467263 ACER3Q9NUN7 267 aa0.3□□□□□ -2.36
SMC4-207ENST00000467263 ZNF462Q96JM2 2506 aa0.3□□□□□ -2.36
SMC4-207ENST00000467263 ABCC11Q96J66 1382 aa0.3□□□□□ -2.36
SMC4-207ENST00000467263 DENND4CQ5VZ89 1909 aa0.29□□□□□ -2.36
SMC4-207ENST00000467263 TRBV6-8A0A0A6YYG3 113 aa0.29□□□□□ -2.36
SMC4-207ENST00000467263 FAM25EA8MYX2 175 aa0.29□□□□□ -2.36
SMC4-207ENST00000467263 IGKV1-5P01602 117 aa0.29□□□□□ -2.36
SMC4-207ENST00000467263 UCHL3P15374 230 aa0.29□□□□□ -2.36
SMC4-207ENST00000467263 HIST1H2BOP23527 126 aa0.29□□□□□ -2.36
SMC4-207ENST00000467263 HIST1H2BBP33778 126 aa0.29□□□□□ -2.36
SMC4-207ENST00000467263 HIST1H2BDP58876 126 aa0.29□□□□□ -2.36
SMC4-207ENST00000467263 NAA20P61599 178 aa0.29□□□□□ -2.36
SMC4-207ENST00000467263 HIST1H2BCP62807 126 aa0.29□□□□□ -2.36
SMC4-207ENST00000467263 IFITM2Q01629 132 aa0.29□□□□□ -2.36
SMC4-207ENST00000467263 HIST2H2BEQ16778 126 aa0.29□□□□□ -2.36
SMC4-207ENST00000467263 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.29□□□□□ -2.36
SMC4-207ENST00000467263 DEFB128Q7Z7B8 93 aa0.29□□□□□ -2.36
SMC4-207ENST00000467263 OR4E2Q8NGC2 313 aa0.29□□□□□ -2.36
SMC4-207ENST00000467263 HIST1H2BHQ93079 126 aa0.29□□□□□ -2.36
SMC4-207ENST00000467263 HIST1H2BNQ99877 126 aa0.29□□□□□ -2.36
SMC4-207ENST00000467263 HIST1H2BMQ99879 126 aa0.29□□□□□ -2.36
SMC4-207ENST00000467263 SCN3AQ9NY46 2000 aa0.29□□□□□ -2.36
SMC4-207ENST00000467263 KMT2DO14686 5537 aa0.29□□□□□ -2.36
SMC4-207ENST00000467263 KIF13BQ9NQT8 1826 aa0.29□□□□□ -2.36
SMC4-207ENST00000467263 DCCP43146 1447 aa0.29□□□□□ -2.36
SMC4-207ENST00000467263 MCM3APO60318 1980 aa0.28□□□□□ -2.36
SMC4-207ENST00000467263 M0R2N4 97 aa0.28□□□□□ -2.36
SMC4-207ENST00000467263 APOEP02649 317 aa0.28□□□□□ -2.36
SMC4-207ENST00000467263 MYL12AP19105 171 aa0.28□□□□□ -2.36
SMC4-207ENST00000467263 SSR2P43308 183 aa0.28□□□□□ -2.36
SMC4-207ENST00000467263 CNBPP62633 177 aaKnown RBP0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms