RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 CTSGP08311 255 aa13.84□□□□□ -0.19
SRSF4-202ENST00000466448 NEDD8Q15843 81 aa13.84□□□□□ -0.19
SRSF4-202ENST00000466448 Q56UQ5 140 aa13.84□□□□□ -0.19
SRSF4-202ENST00000466448 C6orf62Q9GZU0 229 aaPredicted RBP13.84□□□□□ -0.19
SRSF4-202ENST00000466448 CSTL1Q9H114 145 aa13.84□□□□□ -0.19
SRSF4-202ENST00000466448 RNF167Q9H6Y7 350 aa13.84□□□□□ -0.19
SRSF4-202ENST00000466448 NSG2Q9Y328 171 aa13.84□□□□□ -0.19
SRSF4-202ENST00000466448 OR51B2Q9Y5P1 312 aa13.84□□□□□ -0.19
SRSF4-202ENST00000466448 KRASP01116 189 aa13.83□□□□□ -0.2
SRSF4-202ENST00000466448 F2RP25116 425 aa13.83□□□□□ -0.2
SRSF4-202ENST00000466448 NANOS2P60321 138 aaKnown RBP13.83□□□□□ -0.2
SRSF4-202ENST00000466448 HERV-K104P61576 105 aa13.83□□□□□ -0.2
SRSF4-202ENST00000466448 IDNKQ5T6J7 187 aa13.83□□□□□ -0.2
SRSF4-202ENST00000466448 TSPAN14Q8NG11 270 aa13.83□□□□□ -0.2
SRSF4-202ENST00000466448 GATAD1Q8WUU5 269 aa13.83□□□□□ -0.2
SRSF4-202ENST00000466448 FCAMRQ8WWV6 532 aa13.83□□□□□ -0.2
SRSF4-202ENST00000466448 RARRES2Q99969 163 aa13.83□□□□□ -0.2
SRSF4-202ENST00000466448 RHPN1-AS1Q9BWJ2 59 aa13.83□□□□□ -0.2
SRSF4-202ENST00000466448 HECTD4Q9Y4D8 3996 aa13.82□□□□□ -0.2
SRSF4-202ENST00000466448 IGHV3-49A0A0A0MS15 119 aa13.82□□□□□ -0.2
SRSF4-202ENST00000466448 IGHV7-4-1A0A0J9YVY3 117 aa13.82□□□□□ -0.2
SRSF4-202ENST00000466448 MEIS3P1A6NDR6 274 aa13.82□□□□□ -0.2
SRSF4-202ENST00000466448 MPTX1A8MV57 137 aa13.82□□□□□ -0.2
SRSF4-202ENST00000466448 CHEK1O14757 476 aa13.82□□□□□ -0.2
SRSF4-202ENST00000466448 PGLYRP1O75594 196 aaPredicted RBP13.82□□□□□ -0.2
SRSF4-202ENST00000466448 TFPI2P48307 235 aa13.82□□□□□ -0.2
SRSF4-202ENST00000466448 BORCS5Q969J3 196 aa13.82□□□□□ -0.2
SRSF4-202ENST00000466448 DBX1A6NMT0 343 aa13.81□□□□□ -0.2
SRSF4-202ENST00000466448 G6PCP35575 357 aa13.81□□□□□ -0.2
SRSF4-202ENST00000466448 LPAR6P43657 344 aa13.81□□□□□ -0.2
SRSF4-202ENST00000466448 CBX5P45973 191 aa13.81□□□□□ -0.2
SRSF4-202ENST00000466448 TMEM116Q8NCL8 245 aa13.81□□□□□ -0.2
SRSF4-202ENST00000466448 C11orf45Q8TAV5 145 aa13.81□□□□□ -0.2
SRSF4-202ENST00000466448 OR10C1Q96KK4 312 aa13.81□□□□□ -0.2
SRSF4-202ENST00000466448 C11orf68Q9H3H3 251 aaKnown RBP13.81□□□□□ -0.2
SRSF4-202ENST00000466448 DIABLOQ9NR28 239 aa13.81□□□□□ -0.2
SRSF4-202ENST00000466448 EHFQ9NZC4 300 aa13.81□□□□□ -0.2
SRSF4-202ENST00000466448 FBXL17Q9UF56 701 aa13.81□□□□□ -0.2
SRSF4-202ENST00000466448 DNAH10Q8IVF4 4471 aa13.8□□□□□ -0.2
SRSF4-202ENST00000466448 IGKV3-7A0A075B6H7 116 aa13.8□□□□□ -0.2
SRSF4-202ENST00000466448 SNAPC5O75971 98 aa13.8□□□□□ -0.2
SRSF4-202ENST00000466448 YIF1AO95070 293 aa13.8□□□□□ -0.2
SRSF4-202ENST00000466448 PRR20EP86478 221 aa13.8□□□□□ -0.2
SRSF4-202ENST00000466448 PRR20CP86479 221 aa13.8□□□□□ -0.2
SRSF4-202ENST00000466448 PRR20DP86480 221 aa13.8□□□□□ -0.2
SRSF4-202ENST00000466448 PRR20BP86481 221 aa13.8□□□□□ -0.2
SRSF4-202ENST00000466448 PRR20AP86496 221 aa13.8□□□□□ -0.2
SRSF4-202ENST00000466448 RELQ04864 619 aaPredicted RBP13.8□□□□□ -0.2
SRSF4-202ENST00000466448 RBMS2Q15434 407 aaKnown RBP13.8□□□□□ -0.2
SRSF4-202ENST00000466448 DHRS11Q6UWP2 260 aa13.8□□□□□ -0.2
SRSF4-202ENST00000466448 CADM3Q8N126 398 aa13.8□□□□□ -0.2
SRSF4-202ENST00000466448 OR1P1Q8NH06 330 aa13.8□□□□□ -0.2
SRSF4-202ENST00000466448 OR11H2Q8NH07 326 aa13.8□□□□□ -0.2
SRSF4-202ENST00000466448 MOB3AQ96BX8 217 aa13.8□□□□□ -0.2
SRSF4-202ENST00000466448 DGCR14Q96DF8 476 aaKnown RBP13.8□□□□□ -0.2
SRSF4-202ENST00000466448 ZNF2Q9BSG1 426 aaPredicted RBP13.8□□□□□ -0.2
SRSF4-202ENST00000466448 MFFQ9GZY8 342 aa13.8□□□□□ -0.2
SRSF4-202ENST00000466448 PRNDQ9UKY0 176 aa13.8□□□□□ -0.2
SRSF4-202ENST00000466448 NUPL2O15504 423 aaKnown RBP13.79□□□□□ -0.2
SRSF4-202ENST00000466448 RFX2P48378 723 aa13.79□□□□□ -0.2
SRSF4-202ENST00000466448 CMC4P56277 68 aaPredicted RBP13.79□□□□□ -0.2
SRSF4-202ENST00000466448 FAM90A2PQ658T7 463 aa13.79□□□□□ -0.2
SRSF4-202ENST00000466448 SLC25A46Q96AG3 418 aa13.79□□□□□ -0.2
SRSF4-202ENST00000466448 TMEM56Q96MV1 263 aa13.79□□□□□ -0.2
SRSF4-202ENST00000466448 IFT46Q9NQC8 304 aa13.79□□□□□ -0.2
SRSF4-202ENST00000466448 TMEM14BQ9NUH8 114 aa13.79□□□□□ -0.2
SRSF4-202ENST00000466448 IGHV3OR16-13A0A075B7E8 117 aa13.78□□□□□ -0.2
SRSF4-202ENST00000466448 IGHV3-74A0A0B4J1X5 117 aa13.78□□□□□ -0.2
SRSF4-202ENST00000466448 LOC100506127A0A0U1RQW1 187 aa13.78□□□□□ -0.2
SRSF4-202ENST00000466448 I3L2K1 104 aa13.78□□□□□ -0.2
SRSF4-202ENST00000466448 GBGT1Q8N5D6 347 aa13.78□□□□□ -0.2
SRSF4-202ENST00000466448 PCLOQ9Y6V0 5065 aa13.77□□□□□ -0.2
SRSF4-202ENST00000466448 TRAV14DV4A0A0A6YYC5 116 aa13.77□□□□□ -0.21
SRSF4-202ENST00000466448 C15orf61A6NNL5 157 aa13.77□□□□□ -0.21
SRSF4-202ENST00000466448 DEFB4AO15263 64 aa13.77□□□□□ -0.21
SRSF4-202ENST00000466448 CA1P00915 261 aaPredicted RBP13.77□□□□□ -0.21
SRSF4-202ENST00000466448 PMP2P02689 132 aa13.77□□□□□ -0.21
SRSF4-202ENST00000466448 IFNA4P05014 189 aa13.77□□□□□ -0.21
SRSF4-202ENST00000466448 CMTM1Q8IZ96 169 aa13.77□□□□□ -0.21
SRSF4-202ENST00000466448 MISP3Q96FF7 219 aa13.77□□□□□ -0.21
SRSF4-202ENST00000466448 CMTM3Q96MX0 182 aa13.77□□□□□ -0.21
SRSF4-202ENST00000466448 NXF2Q9GZY0 626 aaKnown RBP13.77□□□□□ -0.21
SRSF4-202ENST00000466448 FXYD6Q9H0Q3 95 aa13.77□□□□□ -0.21
SRSF4-202ENST00000466448 FKBP11Q9NYL4 201 aa13.77□□□□□ -0.21
SRSF4-202ENST00000466448 ANAPC10Q9UM13 185 aa13.77□□□□□ -0.21
SRSF4-202ENST00000466448 XRCC3O43542 346 aa13.76□□□□□ -0.21
SRSF4-202ENST00000466448 IGHV3-48P01763 117 aa13.76□□□□□ -0.21
SRSF4-202ENST00000466448 MFAP4P55083 255 aa13.76□□□□□ -0.21
SRSF4-202ENST00000466448 C2CD4CQ8TF44 421 aa13.76□□□□□ -0.21
SRSF4-202ENST00000466448 TSC22D3Q99576 134 aa13.76□□□□□ -0.21
SRSF4-202ENST00000466448 TXN2Q99757 166 aa13.76□□□□□ -0.21
SRSF4-202ENST00000466448 GPR31O00270 319 aa13.75□□□□□ -0.21
SRSF4-202ENST00000466448 TMEM127O75204 238 aa13.75□□□□□ -0.21
SRSF4-202ENST00000466448 MT-CO2P00403 227 aa13.75□□□□□ -0.21
SRSF4-202ENST00000466448 TCF24Q7RTU0 167 aa13.75□□□□□ -0.21
SRSF4-202ENST00000466448 OR5H2Q8NGV7 314 aa13.75□□□□□ -0.21
SRSF4-202ENST00000466448 TAS2R46P59540 309 aa13.74□□□□□ -0.21
SRSF4-202ENST00000466448 PAFAH1B2P68402 229 aa13.74□□□□□ -0.21
SRSF4-202ENST00000466448 TMEM187Q14656 261 aa13.74□□□□□ -0.21
SRSF4-202ENST00000466448 LILRB2Q8N423 598 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 208.7 ms