RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 RPSAP08865 295 aaKnown RBP0.77□□□□□ -2.29
SSB-207ENST00000465871 METTL15P1P0C7V9 234 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 NFYAP23511 347 aaPredicted RBP0.77□□□□□ -2.29
SSB-207ENST00000465871 HIST1H2BOP23527 126 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 HIST1H2BBP33778 126 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 OMPP47874 163 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 HIST1H2BDP58876 126 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 MYL6P60660 151 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 PSME3P61289 254 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 HIST1H2BCP62807 126 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 UBE2IP63279 158 aaKnown RBP0.77□□□□□ -2.29
SSB-207ENST00000465871 CCL20P78556 96 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 RUNX1Q01196 453 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 IFITM2Q01629 132 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 KISS1Q15726 138 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 KCNJ8Q15842 424 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 NNATQ16517 81 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 HIST2H2BEQ16778 126 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 IMPG1Q17R60 797 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.77□□□□□ -2.29
SSB-207ENST00000465871 IBA57Q5T440 356 aaKnown RBP0.77□□□□□ -2.29
SSB-207ENST00000465871 SPOPLQ6IQ16 392 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 ALKAL1Q6UXT8 129 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 Q6ZS49 121 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 AAED1Q7RTV5 226 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 DCXRQ7Z4W1 244 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 C20orf196Q8IYI0 205 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 DYNAPQ8N1N2 210 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 LINC00471Q8N535 108 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 TMEM86BQ8N661 226 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 MRPL30Q8TCC3 161 aaKnown RBP0.77□□□□□ -2.29
SSB-207ENST00000465871 MBD3L1Q8WWY6 194 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 HIST1H2BHQ93079 126 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 TMEM106AQ96A25 262 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 OR52E6Q96RD3 313 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 HIST1H2BNQ99877 126 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 HIST1H2BMQ99879 126 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 DERL1Q9BUN8 251 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 BAIAP2Q9UQB8 552 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 KIF24Q5T7B8 1368 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 REREQ9P2R6 1566 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 CCDC88CQ9P219 2028 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 WDR90Q96KV7 1748 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 SCAF11Q99590 1463 aaKnown RBP0.76□□□□□ -2.29
SSB-207ENST00000465871 MAP3K5Q99683 1374 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 TTC21AQ8NDW8 1320 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 OR4C46A6NHA9 309 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 TMEM212A6NML5 194 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 IBA57-AS1B1ANH7 110 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 F8W036 122 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 CHP2O43745 196 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 RPL5P46777 297 aaKnown RBP0.76□□□□□ -2.29
SSB-207ENST00000465871 FXYD2P54710 66 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 RPS20P60866 119 aaKnown RBP0.76□□□□□ -2.29
SSB-207ENST00000465871 SNRPD2P62316 118 aaKnown RBP0.76□□□□□ -2.29
SSB-207ENST00000465871 AESQ08117 197 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 CDK5R1Q15078 307 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 SURF2Q15527 256 aaPredicted RBP0.76□□□□□ -2.29
SSB-207ENST00000465871 Q1T7F1 81 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 ACOT6Q3I5F7 207 aaPredicted RBP0.76□□□□□ -2.29
SSB-207ENST00000465871 LPCAT3Q6P1A2 487 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 RPL22L1Q6P5R6 122 aaKnown RBP0.76□□□□□ -2.29
SSB-207ENST00000465871 LCN15Q6UWW0 184 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 DHFR2Q86XF0 187 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 CLVS1Q8IUQ0 354 aaPredicted RBP0.76□□□□□ -2.29
SSB-207ENST00000465871 LRRC25Q8N386 305 aaPredicted RBP0.76□□□□□ -2.29
SSB-207ENST00000465871 MNS1Q8NEH6 495 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 OR8J2Q8NGG1 315 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 C11orf40Q8WZ69 217 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 C8orf76Q96K31 380 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 SCGB3A1Q96QR1 104 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 C11orf68Q9H3H3 251 aaKnown RBP0.76□□□□□ -2.29
SSB-207ENST00000465871 PRTFDC1Q9NRG1 225 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 FBXL12Q9NXK8 326 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 HEATR5AQ86XA9 2040 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 GREB1Q4ZG55 1949 aa0.76□□□□□ -2.29
SSB-207ENST00000465871 DISP1Q96F81 1524 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 TRAV9-1A0A075B6T8 112 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 IGKV3D-7A0A0C4DH55 119 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 IGKV3OR2-268A0A0C4DH90 116 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 EXOC1LA0A1B0GW35 172 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 CLDN24A6NM45 220 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 HIST1H1TP22492 207 aaPredicted RBP0.75□□□□□ -2.29
SSB-207ENST00000465871 STX5Q13190 355 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 ZNF345Q14585 488 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 SPANXN3Q5MJ09 141 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 SYPL2Q5VXT5 272 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 DPPA3Q6W0C5 159 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 KRT222Q8N1A0 295 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 CLDN22Q8N7P3 220 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 C9orf163Q8N9P6 203 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 ZNF439Q8NDP4 499 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 RASSF5Q8WWW0 418 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 SERPINI1Q99574 410 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 NIPSNAP1Q9BPW8 284 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 ADAT1Q9BUB4 502 aaKnown RBP0.75□□□□□ -2.29
SSB-207ENST00000465871 TMEM147Q9BVK8 224 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 YIPF3Q9GZM5 350 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 CKLFQ9UBR5 152 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 SOX21Q9Y651 276 aaPredicted RBP0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms