RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 PRR20CP86479 221 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 PRR20DP86480 221 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 PRR20BP86481 221 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 PRR20AP86496 221 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 TMEM249Q2WGJ8 235 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 VMA21Q3ZAQ7 101 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 TMEM144Q7Z5S9 345 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 STPG3Q8N7X2 389 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 ABHD5Q8WTS1 349 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 YPEL4Q96NS1 127 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 NIPSNAP3BQ9BS92 247 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 SSBP3Q9BWW4 388 aaPredicted RBP8.18□□□□□ -1.1
MSH5-211ENST00000463144 PLXNB1O43157 2135 aa8.17□□□□□ -1.1
MSH5-211ENST00000463144 A6NNC1 897 aa8.17□□□□□ -1.1
MSH5-211ENST00000463144 TAGLN2P37802 199 aaKnown RBP8.17□□□□□ -1.1
MSH5-211ENST00000463144 PSMB3P49720 205 aa8.17□□□□□ -1.1
MSH5-211ENST00000463144 B2MP61769 119 aa8.17□□□□□ -1.1
MSH5-211ENST00000463144 ERHP84090 104 aaKnown RBP8.17□□□□□ -1.1
MSH5-211ENST00000463144 SPATA31B1PQ5VZV4 182 aa8.17□□□□□ -1.1
MSH5-211ENST00000463144 HCP5Q6MZN7 132 aa8.17□□□□□ -1.1
MSH5-211ENST00000463144 IQCF2Q8IXL9 164 aa8.17□□□□□ -1.1
MSH5-211ENST00000463144 MANBALQ9NQG1 85 aa8.17□□□□□ -1.1
MSH5-211ENST00000463144 SIRT7Q9NRC8 400 aa8.17□□□□□ -1.1
MSH5-211ENST00000463144 SLC45A2Q9UMX9 530 aa8.17□□□□□ -1.1
MSH5-211ENST00000463144 LOC105371242A0A075B767 164 aa8.17□□□□□ -1.1
MSH5-211ENST00000463144 A0A1W2PPI3 338 aa8.17□□□□□ -1.1
MSH5-211ENST00000463144 A0A1W2PPV4 95 aa8.17□□□□□ -1.1
MSH5-211ENST00000463144 STAG3L2P0CL84 134 aa8.17□□□□□ -1.1
MSH5-211ENST00000463144 STAG3L3P0CL85 134 aa8.17□□□□□ -1.1
MSH5-211ENST00000463144 CD69Q07108 199 aa8.17□□□□□ -1.1
MSH5-211ENST00000463144 PSG5Q15238 335 aa8.17□□□□□ -1.1
MSH5-211ENST00000463144 TEX45Q8NA69 505 aa8.17□□□□□ -1.1
MSH5-211ENST00000463144 OR2T6Q8NHC8 308 aa8.17□□□□□ -1.1
MSH5-211ENST00000463144 IGFBPL1Q8WX77 278 aa8.17□□□□□ -1.1
MSH5-211ENST00000463144 SDF2L1Q9HCN8 221 aa8.17□□□□□ -1.1
MSH5-211ENST00000463144 SEPSECSQ9HD40 501 aaKnown RBP8.17□□□□□ -1.1
MSH5-211ENST00000463144 CFAP46Q8IYW2 2715 aa8.16□□□□□ -1.1
MSH5-211ENST00000463144 A0A1W2PN81 502 aa8.16□□□□□ -1.1
MSH5-211ENST00000463144 hCG_1809904A0A1W2PP81 198 aa8.16□□□□□ -1.1
MSH5-211ENST00000463144 A0A1W2PR64 198 aa8.16□□□□□ -1.1
MSH5-211ENST00000463144 A0A1W2PRV1 198 aa8.16□□□□□ -1.1
MSH5-211ENST00000463144 NPPCP23582 126 aa8.16□□□□□ -1.1
MSH5-211ENST00000463144 GATA2P23769 480 aaPredicted RBP8.16□□□□□ -1.1
MSH5-211ENST00000463144 CHRNA7P36544 502 aa8.16□□□□□ -1.1
MSH5-211ENST00000463144 KLRD1Q13241 179 aa8.16□□□□□ -1.1
MSH5-211ENST00000463144 PRSS8Q16651 343 aa8.16□□□□□ -1.1
MSH5-211ENST00000463144 FAM24BQ8N5W8 94 aa8.16□□□□□ -1.1
MSH5-211ENST00000463144 OR11H6Q8NGC7 330 aa8.16□□□□□ -1.1
MSH5-211ENST00000463144 RPEQ96AT9 228 aa8.16□□□□□ -1.1
MSH5-211ENST00000463144 FNDC4Q9H6D8 234 aaPredicted RBP8.16□□□□□ -1.1
MSH5-211ENST00000463144 A0A087WWC5 75 aa8.15□□□□□ -1.1
MSH5-211ENST00000463144 REG1AP05451 166 aa8.15□□□□□ -1.1
MSH5-211ENST00000463144 ZFP36P26651 326 aaKnown RBP8.15□□□□□ -1.1
MSH5-211ENST00000463144 GPR6P46095 362 aaPredicted RBP8.15□□□□□ -1.1
MSH5-211ENST00000463144 RAB31Q13636 194 aa8.15□□□□□ -1.1
MSH5-211ENST00000463144 OR4F5Q8NH21 305 aa8.15□□□□□ -1.1
MSH5-211ENST00000463144 OR4F4Q96R69 305 aa8.15□□□□□ -1.1
MSH5-211ENST00000463144 SIGLEC9Q9Y336 463 aa8.15□□□□□ -1.1
MSH5-211ENST00000463144 AMMECR1Q9Y4X0 333 aaPredicted RBP8.15□□□□□ -1.1
MSH5-211ENST00000463144 NAV3Q8IVL0 2385 aa8.15□□□□□ -1.1
MSH5-211ENST00000463144 IGLC7A0M8Q6 106 aa8.15□□□□□ -1.1
MSH5-211ENST00000463144 TMEM250H0YL14 139 aa8.15□□□□□ -1.1
MSH5-211ENST00000463144 M0R1W7 72 aa8.15□□□□□ -1.1
MSH5-211ENST00000463144 FOXH1O75593 365 aa8.15□□□□□ -1.1
MSH5-211ENST00000463144 OR2C1O95371 312 aa8.15□□□□□ -1.1
MSH5-211ENST00000463144 MT-ND4LP03901 98 aa8.15□□□□□ -1.1
MSH5-211ENST00000463144 ARL14EPLP0DKL9 152 aa8.15□□□□□ -1.1
MSH5-211ENST00000463144 OR10J1P30954 320 aa8.15□□□□□ -1.1
MSH5-211ENST00000463144 MAS1LP35410 378 aa8.15□□□□□ -1.1
MSH5-211ENST00000463144 GPX4P36969 197 aaPredicted RBP8.15□□□□□ -1.1
MSH5-211ENST00000463144 SSBP2P81877 361 aaPredicted RBP8.15□□□□□ -1.1
MSH5-211ENST00000463144 TPTE2P1Q5T6R2 138 aa8.15□□□□□ -1.1
MSH5-211ENST00000463144 SPNS3Q6ZMD2 512 aa8.15□□□□□ -1.1
MSH5-211ENST00000463144 SLC16A13Q7RTY0 426 aa8.15□□□□□ -1.1
MSH5-211ENST00000463144 LHFPL4Q7Z7J7 247 aa8.15□□□□□ -1.1
MSH5-211ENST00000463144 KCNIP2Q9NS61 270 aa8.15□□□□□ -1.1
MSH5-211ENST00000463144 MRPL36Q9P0J6 103 aaKnown RBP8.15□□□□□ -1.1
MSH5-211ENST00000463144 ASH1LQ9NR48 2969 aaKnown RBP8.14□□□□□ -1.11
MSH5-211ENST00000463144 IGSF10Q6WRI0 2623 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 FCN1O00602 326 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 TIMM23O14925 209 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 NDUFS6O75380 124 aaKnown RBP8.14□□□□□ -1.11
MSH5-211ENST00000463144 IGHV3-48P01763 117 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 FOLR2P14207 255 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 PRTN3P24158 256 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 ATP5G3P48201 142 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 MFAP2P55001 183 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 UBE2G2P60604 165 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 FLI1Q01543 452 aaPredicted RBP8.14□□□□□ -1.11
MSH5-211ENST00000463144 SMUG1Q53HV7 270 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 RUSC1-AS1Q66K80 236 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 C19orf35Q6ZS72 473 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 MMD2Q8IY49 270 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 CACNG8Q8WXS5 425 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 RPUSD4Q96CM3 377 aaKnown RBP8.14□□□□□ -1.11
MSH5-211ENST00000463144 PARLQ9H300 379 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 METTL1Q9UBP6 276 aaKnown RBP8.14□□□□□ -1.11
MSH5-211ENST00000463144 MLXQ9UH92 298 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 ODF3BA8MYP8 253 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 C11orf94C9JXX5 98 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms