RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 SPCS2Q15005 226 aa11.62□□□□□ -0.55
NUP50-213ENST00000461437 MZT2AQ6P582 158 aa11.62□□□□□ -0.55
NUP50-213ENST00000461437 LAX1Q8IWV1 398 aa11.62□□□□□ -0.55
NUP50-213ENST00000461437 SLC38A6Q8IZM9 456 aa11.62□□□□□ -0.55
NUP50-213ENST00000461437 SCARB1Q8WTV0 552 aa11.62□□□□□ -0.55
NUP50-213ENST00000461437 ZNF414Q96IQ9 312 aa11.62□□□□□ -0.55
NUP50-213ENST00000461437 ZNF436Q9C0F3 470 aaPredicted RBP11.62□□□□□ -0.55
NUP50-213ENST00000461437 THYN1Q9P016 225 aa11.62□□□□□ -0.55
NUP50-213ENST00000461437 ADMP35318 185 aa11.61□□□□□ -0.55
NUP50-213ENST00000461437 Q56UQ5 140 aa11.61□□□□□ -0.55
NUP50-213ENST00000461437 THOC7Q6I9Y2 204 aaKnown RBP11.61□□□□□ -0.55
NUP50-213ENST00000461437 FAAP20Q6NZ36 180 aa11.61□□□□□ -0.55
NUP50-213ENST00000461437 LPCAT3Q6P1A2 487 aa11.61□□□□□ -0.55
NUP50-213ENST00000461437 H2BFWTQ7Z2G1 175 aa11.61□□□□□ -0.55
NUP50-213ENST00000461437 OR52B4Q8NGK2 314 aa11.61□□□□□ -0.55
NUP50-213ENST00000461437 VN1R17PQ8TDU5 208 aa11.61□□□□□ -0.55
NUP50-213ENST00000461437 TMEM190Q8WZ59 177 aa11.61□□□□□ -0.55
NUP50-213ENST00000461437 ISOC1Q96CN7 298 aa11.61□□□□□ -0.55
NUP50-213ENST00000461437 MISP3Q96FF7 219 aa11.61□□□□□ -0.55
NUP50-213ENST00000461437 TP53RKQ96S44 253 aa11.61□□□□□ -0.55
NUP50-213ENST00000461437 C20orf24Q9BUV8 137 aa11.61□□□□□ -0.55
NUP50-213ENST00000461437 TMEM14BQ9NUH8 114 aa11.61□□□□□ -0.55
NUP50-213ENST00000461437 C21orf62Q9NYP8 219 aa11.61□□□□□ -0.55
NUP50-213ENST00000461437 UBQLN2Q9UHD9 624 aa11.61□□□□□ -0.55
NUP50-213ENST00000461437 PRNDQ9UKY0 176 aa11.61□□□□□ -0.55
NUP50-213ENST00000461437 HYDINQ4G0P3 5121 aa11.6□□□□□ -0.55
NUP50-213ENST00000461437 CTDSP2O14595 271 aa11.6□□□□□ -0.55
NUP50-213ENST00000461437 FGF2P09038 288 aa11.6□□□□□ -0.55
NUP50-213ENST00000461437 UCP3P55916 312 aa11.6□□□□□ -0.55
NUP50-213ENST00000461437 SP6Q3SY56 376 aa11.6□□□□□ -0.55
NUP50-213ENST00000461437 RNASE10Q5GAN6 216 aaKnown RBP11.6□□□□□ -0.55
NUP50-213ENST00000461437 LHFPL1Q86WI0 220 aa11.6□□□□□ -0.55
NUP50-213ENST00000461437 OR4A16Q8NH70 328 aa11.6□□□□□ -0.55
NUP50-213ENST00000461437 AP3S1Q92572 193 aa11.6□□□□□ -0.55
NUP50-213ENST00000461437 IGHV3-49A0A0A0MS15 119 aa11.59□□□□□ -0.55
NUP50-213ENST00000461437 IGKV1-5P01602 117 aa11.59□□□□□ -0.55
NUP50-213ENST00000461437 IFNA6P05013 189 aa11.59□□□□□ -0.55
NUP50-213ENST00000461437 C8orf88P0DMB2 117 aa11.59□□□□□ -0.55
NUP50-213ENST00000461437 S100GP29377 79 aa11.59□□□□□ -0.55
NUP50-213ENST00000461437 ALDH3B2P48448 385 aa11.59□□□□□ -0.55
NUP50-213ENST00000461437 PIGPP57054 158 aa11.59□□□□□ -0.55
NUP50-213ENST00000461437 SCGB2B2Q4G0G5 96 aa11.59□□□□□ -0.55
NUP50-213ENST00000461437 HSD17B13Q7Z5P4 300 aaPredicted RBP11.59□□□□□ -0.55
NUP50-213ENST00000461437 GPR141Q7Z602 305 aa11.59□□□□□ -0.55
NUP50-213ENST00000461437 OR2C3Q8N628 320 aa11.59□□□□□ -0.55
NUP50-213ENST00000461437 OR5B3Q8NH48 314 aa11.59□□□□□ -0.55
NUP50-213ENST00000461437 TMEM56Q96MV1 263 aa11.59□□□□□ -0.55
NUP50-213ENST00000461437 MRPS26Q9BYN8 205 aaKnown RBP11.59□□□□□ -0.55
NUP50-213ENST00000461437 MTFP1Q9UDX5 166 aa11.59□□□□□ -0.55
NUP50-213ENST00000461437 UFC1Q9Y3C8 167 aa11.59□□□□□ -0.55
NUP50-213ENST00000461437 EPPK1P58107 5090 aaKnown RBP11.59□□□□□ -0.55
NUP50-213ENST00000461437 DNAH1Q9P2D7 4330 aa11.59□□□□□ -0.55
NUP50-213ENST00000461437 RGS5O15539 181 aa11.58□□□□□ -0.56
NUP50-213ENST00000461437 RBPMS2Q6ZRY4 209 aaKnown RBP11.58□□□□□ -0.56
NUP50-213ENST00000461437 SLC16A13Q7RTY0 426 aa11.58□□□□□ -0.56
NUP50-213ENST00000461437 CLVS1Q8IUQ0 354 aaPredicted RBP11.58□□□□□ -0.56
NUP50-213ENST00000461437 PINX1Q96BK5 328 aaKnown RBP11.58□□□□□ -0.56
NUP50-213ENST00000461437 BSCL2Q96G97 398 aaPredicted RBP11.58□□□□□ -0.56
NUP50-213ENST00000461437 TSC22D3Q99576 134 aa11.58□□□□□ -0.56
NUP50-213ENST00000461437 FKBP11Q9NYL4 201 aa11.58□□□□□ -0.56
NUP50-213ENST00000461437 MRPL27Q9P0M9 148 aaKnown RBP11.58□□□□□ -0.56
NUP50-213ENST00000461437 PLECQ15149 4684 aaKnown RBP11.57□□□□□ -0.56
NUP50-213ENST00000461437 A0A0G2JRQ6 117 aa11.57□□□□□ -0.56
NUP50-213ENST00000461437 I3L2K1 104 aa11.57□□□□□ -0.56
NUP50-213ENST00000461437 CYB5BO43169 146 aa11.57□□□□□ -0.56
NUP50-213ENST00000461437 MT-CO2P00403 227 aa11.57□□□□□ -0.56
NUP50-213ENST00000461437 RND3P61587 244 aa11.57□□□□□ -0.56
NUP50-213ENST00000461437 PRCDQ00LT1 54 aa11.57□□□□□ -0.56
NUP50-213ENST00000461437 OR1L6Q8NGR2 347 aa11.57□□□□□ -0.56
NUP50-213ENST00000461437 OR13C8Q8NGS7 320 aa11.57□□□□□ -0.56
NUP50-213ENST00000461437 OR1P1Q8NH06 330 aa11.57□□□□□ -0.56
NUP50-213ENST00000461437 MARCH1Q8TCQ1 289 aa11.57□□□□□ -0.56
NUP50-213ENST00000461437 IGHV3OR16-13A0A075B7E8 117 aa11.56□□□□□ -0.56
NUP50-213ENST00000461437 IGHV3-74A0A0B4J1X5 117 aa11.56□□□□□ -0.56
NUP50-213ENST00000461437 NDUFA4O00483 81 aa11.56□□□□□ -0.56
NUP50-213ENST00000461437 RAB3DO95716 219 aa11.56□□□□□ -0.56
NUP50-213ENST00000461437 CTSGP08311 255 aa11.56□□□□□ -0.56
NUP50-213ENST00000461437 AKR1C2P52895 323 aa11.56□□□□□ -0.56
NUP50-213ENST00000461437 ELLP55199 621 aaPredicted RBP11.56□□□□□ -0.56
NUP50-213ENST00000461437 HSPE1P61604 102 aaKnown RBP11.56□□□□□ -0.56
NUP50-213ENST00000461437 CADM3Q8N126 398 aa11.56□□□□□ -0.56
NUP50-213ENST00000461437 MARC2Q969Z3 335 aa11.56□□□□□ -0.56
NUP50-213ENST00000461437 DAZ1Q9NQZ3 744 aaKnown RBP11.56□□□□□ -0.56
NUP50-213ENST00000461437 FAM212BQ9NTI7 297 aaPredicted RBP11.56□□□□□ -0.56
NUP50-213ENST00000461437 BIRC6Q9NR09 4857 aa11.56□□□□□ -0.56
NUP50-213ENST00000461437 IGKV3-7A0A075B6H7 116 aa11.55□□□□□ -0.56
NUP50-213ENST00000461437 A0A0B4J293 547 aa11.55□□□□□ -0.56
NUP50-213ENST00000461437 C3orf85A0A1B0GTC6 90 aa11.55□□□□□ -0.56
NUP50-213ENST00000461437 ST8SIA3O43173 380 aa11.55□□□□□ -0.56
NUP50-213ENST00000461437 CD74P04233 296 aa11.55□□□□□ -0.56
NUP50-213ENST00000461437 P0C879 139 aa11.55□□□□□ -0.56
NUP50-213ENST00000461437 TAS2R19P59542 299 aa11.55□□□□□ -0.56
NUP50-213ENST00000461437 TRIM16LQ309B1 348 aa11.55□□□□□ -0.56
NUP50-213ENST00000461437 STEAP1BQ6NZ63 245 aa11.55□□□□□ -0.56
NUP50-213ENST00000461437 ARRDC1Q8N5I2 433 aa11.55□□□□□ -0.56
NUP50-213ENST00000461437 TMEM229BQ8NBD8 167 aa11.55□□□□□ -0.56
NUP50-213ENST00000461437 COPZ2Q9P299 210 aa11.55□□□□□ -0.56
NUP50-213ENST00000461437 ALMS1Q8TCU4 4167 aa11.54□□□□□ -0.56
NUP50-213ENST00000461437 TRAV25A0A0B4J276 109 aa11.54□□□□□ -0.56
NUP50-213ENST00000461437 GABARAPH6UMI1 98 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms