RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 FAM223AQ8IWN6 122 aa12.86□□□□□ -0.35
TOP3A-202ENST00000461127 GPN1Q9HCN4 374 aaPredicted RBP12.86□□□□□ -0.35
TOP3A-202ENST00000461127 MSGN1A6NI15 193 aa12.85□□□□□ -0.35
TOP3A-202ENST00000461127 PGLYRP1O75594 196 aaPredicted RBP12.85□□□□□ -0.35
TOP3A-202ENST00000461127 IGLV2-14P01704 120 aa12.85□□□□□ -0.35
TOP3A-202ENST00000461127 MED14OSP0DP75 135 aa12.85□□□□□ -0.35
TOP3A-202ENST00000461127 VAMP1P23763 118 aa12.85□□□□□ -0.35
TOP3A-202ENST00000461127 SSBP2P81877 361 aaPredicted RBP12.85□□□□□ -0.35
TOP3A-202ENST00000461127 RHOGP84095 191 aa12.85□□□□□ -0.35
TOP3A-202ENST00000461127 ATP5G2Q06055 141 aa12.85□□□□□ -0.35
TOP3A-202ENST00000461127 PJVKQ0ZLH3 352 aa12.85□□□□□ -0.35
TOP3A-202ENST00000461127 CATR1Q13166 79 aa12.85□□□□□ -0.35
TOP3A-202ENST00000461127 FAM209BQ5JX69 171 aa12.85□□□□□ -0.35
TOP3A-202ENST00000461127 ZNF66Q6ZN08 573 aa12.85□□□□□ -0.35
TOP3A-202ENST00000461127 TBC1D26Q86UD7 250 aa12.85□□□□□ -0.35
TOP3A-202ENST00000461127 TMEM230Q96A57 120 aa12.85□□□□□ -0.35
TOP3A-202ENST00000461127 HSD17B10Q99714 261 aaKnown RBP12.85□□□□□ -0.35
TOP3A-202ENST00000461127 NAA60Q9H7X0 242 aa12.85□□□□□ -0.35
TOP3A-202ENST00000461127 KCNIP3Q9Y2W7 256 aa12.85□□□□□ -0.35
TOP3A-202ENST00000461127 CRYM-AS1A6NIL9 109 aa12.84□□□□□ -0.35
TOP3A-202ENST00000461127 MPPED1O15442 326 aa12.84□□□□□ -0.35
TOP3A-202ENST00000461127 HLA-AP01891 365 aaKnown RBP12.84□□□□□ -0.35
TOP3A-202ENST00000461127 IL5P05113 134 aa12.84□□□□□ -0.35
TOP3A-202ENST00000461127 OR4E1P0C645 316 aa12.84□□□□□ -0.35
TOP3A-202ENST00000461127 OR9G9P0C7N8 305 aa12.84□□□□□ -0.35
TOP3A-202ENST00000461127 APELAP0DMC3 54 aa12.84□□□□□ -0.35
TOP3A-202ENST00000461127 ANXA3P12429 323 aa12.84□□□□□ -0.35
TOP3A-202ENST00000461127 PPP1R1AQ13522 171 aa12.84□□□□□ -0.35
TOP3A-202ENST00000461127 ZNF383Q8NA42 475 aa12.84□□□□□ -0.35
TOP3A-202ENST00000461127 OR51H1Q8NH63 302 aa12.84□□□□□ -0.35
TOP3A-202ENST00000461127 TCTEX1D2Q8WW35 142 aa12.84□□□□□ -0.35
TOP3A-202ENST00000461127 C5orf30Q96GV9 206 aa12.84□□□□□ -0.35
TOP3A-202ENST00000461127 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.83□□□□□ -0.36
TOP3A-202ENST00000461127 UBE2CO00762 179 aa12.83□□□□□ -0.36
TOP3A-202ENST00000461127 RBMXL2O75526 392 aaKnown RBP12.83□□□□□ -0.36
TOP3A-202ENST00000461127 DEFB135Q30KP9 77 aa12.83□□□□□ -0.36
TOP3A-202ENST00000461127 Q6ZNX1 250 aa12.83□□□□□ -0.36
TOP3A-202ENST00000461127 KCTD9Q7L273 389 aa12.83□□□□□ -0.36
TOP3A-202ENST00000461127 TMEM61Q8N0U2 210 aa12.83□□□□□ -0.36
TOP3A-202ENST00000461127 ADTRPQ96IZ2 230 aa12.83□□□□□ -0.36
TOP3A-202ENST00000461127 GPHA2Q96T91 129 aa12.83□□□□□ -0.36
TOP3A-202ENST00000461127 SEC22CQ9BRL7 303 aa12.83□□□□□ -0.36
TOP3A-202ENST00000461127 SLC35D1Q9NTN3 355 aa12.83□□□□□ -0.36
TOP3A-202ENST00000461127 C3orf85A0A1B0GTC6 90 aa12.82□□□□□ -0.36
TOP3A-202ENST00000461127 LGALS9O00182 355 aa12.82□□□□□ -0.36
TOP3A-202ENST00000461127 GGCTO75223 188 aaKnown RBP12.82□□□□□ -0.36
TOP3A-202ENST00000461127 B3GALNT1O75752 331 aa12.82□□□□□ -0.36
TOP3A-202ENST00000461127 CBLN1P23435 193 aa12.82□□□□□ -0.36
TOP3A-202ENST00000461127 F2RP25116 425 aa12.82□□□□□ -0.36
TOP3A-202ENST00000461127 DUTP33316 252 aaKnown RBP12.82□□□□□ -0.36
TOP3A-202ENST00000461127 DHODHQ02127 395 aa12.82□□□□□ -0.36
TOP3A-202ENST00000461127 CBX3Q13185 183 aa12.82□□□□□ -0.36
TOP3A-202ENST00000461127 DHRS2Q13268 280 aa12.82□□□□□ -0.36
TOP3A-202ENST00000461127 TM4SF20Q53R12 229 aa12.82□□□□□ -0.36
TOP3A-202ENST00000461127 LINC00336Q6ZUF6 198 aa12.82□□□□□ -0.36
TOP3A-202ENST00000461127 PRELID3BQ9Y3B1 194 aa12.82□□□□□ -0.36
TOP3A-202ENST00000461127 ALG5Q9Y673 324 aa12.82□□□□□ -0.36
TOP3A-202ENST00000461127 VPS13DQ5THJ4 4388 aa12.81□□□□□ -0.36
TOP3A-202ENST00000461127 C9orf170A2RU37 121 aa12.81□□□□□ -0.36
TOP3A-202ENST00000461127 CREBL2O60519 120 aaPredicted RBP12.81□□□□□ -0.36
TOP3A-202ENST00000461127 SCAF4O95104 1147 aaKnown RBP12.81□□□□□ -0.36
TOP3A-202ENST00000461127 SFT2D2O95562 160 aa12.81□□□□□ -0.36
TOP3A-202ENST00000461127 IGLV2-23P01705 113 aa12.81□□□□□ -0.36
TOP3A-202ENST00000461127 OR5AC1P0C628 307 aa12.81□□□□□ -0.36
TOP3A-202ENST00000461127 ZNF431Q8TF32 576 aaPredicted RBP12.81□□□□□ -0.36
TOP3A-202ENST00000461127 HARBI1Q96MB7 349 aa12.81□□□□□ -0.36
TOP3A-202ENST00000461127 SNRPGP15A8MWD9 76 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 SSNA1O43805 119 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 PROP1O75360 226 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 IFNA4P05014 189 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 SERPINE2P07093 398 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 CRYGBP07316 175 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 EDN2P20800 178 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 LINC00205P59089 165 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 RPL30P62888 115 aaKnown RBP12.8□□□□□ -0.36
TOP3A-202ENST00000461127 SUPT4H1P63272 117 aaKnown RBP12.8□□□□□ -0.36
TOP3A-202ENST00000461127 SRPXP78539 464 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 PRR20EP86478 221 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 PRR20CP86479 221 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 PRR20DP86480 221 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 PRR20BP86481 221 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 PRR20AP86496 221 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 EIF4EBP1Q13541 118 aaPredicted RBP12.8□□□□□ -0.36
TOP3A-202ENST00000461127 SP6Q3SY56 376 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 OR2B11Q5JQS5 317 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 SPAG16Q8N0X2 631 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 STPG3Q8N7X2 389 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 NECAP1Q8NC96 275 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 COQ8AQ8NI60 647 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 CACNG8Q8WXS5 425 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 GALNT14Q96FL9 552 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 SELENOKQ9Y6D0 94 aa12.8□□□□□ -0.36
TOP3A-202ENST00000461127 hCG_2014768A0A024R1R8 64 aa12.79□□□□□ -0.36
TOP3A-202ENST00000461127 A0A0B4J293 547 aa12.79□□□□□ -0.36
TOP3A-202ENST00000461127 C7orf66A4D0T2 115 aa12.79□□□□□ -0.36
TOP3A-202ENST00000461127 LINC00473A8K010 186 aa12.79□□□□□ -0.36
TOP3A-202ENST00000461127 PPP5D1E7EU14 171 aa12.79□□□□□ -0.36
TOP3A-202ENST00000461127 SHOXO15266 292 aa12.79□□□□□ -0.36
TOP3A-202ENST00000461127 FCGR3BO75015 233 aa12.79□□□□□ -0.36
TOP3A-202ENST00000461127 OR2C1O95371 312 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms