RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 HINT2Q9BX68 163 aa11.29□□□□□ -0.6
NCK1-202ENST00000460960 ALX4Q9H161 411 aaPredicted RBP11.29□□□□□ -0.6
NCK1-202ENST00000460960 NUDT15Q9NV35 164 aa11.29□□□□□ -0.6
NCK1-202ENST00000460960 DMRT1Q9Y5R6 373 aa11.29□□□□□ -0.6
NCK1-202ENST00000460960 C9orf170A2RU37 121 aa11.28□□□□□ -0.6
NCK1-202ENST00000460960 ST8SIA3O43173 380 aa11.28□□□□□ -0.6
NCK1-202ENST00000460960 B3GALNT1O75752 331 aa11.28□□□□□ -0.6
NCK1-202ENST00000460960 SNAPC5O75971 98 aa11.28□□□□□ -0.6
NCK1-202ENST00000460960 SPNP16150 400 aa11.28□□□□□ -0.6
NCK1-202ENST00000460960 WT1-ASQ06250 92 aa11.28□□□□□ -0.6
NCK1-202ENST00000460960 ZNF616Q08AN1 781 aa11.28□□□□□ -0.6
NCK1-202ENST00000460960 ZNF429Q86V71 674 aa11.28□□□□□ -0.6
NCK1-202ENST00000460960 ZNF491Q8N8L2 437 aa11.28□□□□□ -0.6
NCK1-202ENST00000460960 CITED4Q96RK1 184 aa11.28□□□□□ -0.6
NCK1-202ENST00000460960 COMMD5Q9GZQ3 224 aa11.28□□□□□ -0.6
NCK1-202ENST00000460960 NDUFA4L2Q9NRX3 87 aa11.28□□□□□ -0.6
NCK1-202ENST00000460960 ZNF355PQ9NSJ1 428 aa11.28□□□□□ -0.6
NCK1-202ENST00000460960 COA4Q9NYJ1 87 aa11.28□□□□□ -0.6
NCK1-202ENST00000460960 KCNIP3Q9Y2W7 256 aa11.28□□□□□ -0.6
NCK1-202ENST00000460960 FAM240BA0A1B0GVZ2 78 aa11.27□□□□□ -0.61
NCK1-202ENST00000460960 OVOL1O14753 267 aa11.27□□□□□ -0.61
NCK1-202ENST00000460960 NXPH3O95157 252 aa11.27□□□□□ -0.61
NCK1-202ENST00000460960 IGHV3-11P01762 117 aa11.27□□□□□ -0.61
NCK1-202ENST00000460960 TRGV3P03979 118 aa11.27□□□□□ -0.61
NCK1-202ENST00000460960 OR4E1P0C645 316 aa11.27□□□□□ -0.61
NCK1-202ENST00000460960 TRAPPC2P0DI81 140 aa11.27□□□□□ -0.61
NCK1-202ENST00000460960 TRAPPC2BP0DI82 140 aa11.27□□□□□ -0.61
NCK1-202ENST00000460960 TPPP2P59282 170 aa11.27□□□□□ -0.61
NCK1-202ENST00000460960 UBE2MP61081 183 aaKnown RBP11.27□□□□□ -0.61
NCK1-202ENST00000460960 DHRS2Q13268 280 aa11.27□□□□□ -0.61
NCK1-202ENST00000460960 NMSQ5H8A3 153 aa11.27□□□□□ -0.61
NCK1-202ENST00000460960 NRARPQ7Z6K4 114 aa11.27□□□□□ -0.61
NCK1-202ENST00000460960 TTC9CQ8N5M4 171 aa11.27□□□□□ -0.61
NCK1-202ENST00000460960 OR1L8Q8NGR8 309 aa11.27□□□□□ -0.61
NCK1-202ENST00000460960 OR4A16Q8NH70 328 aa11.27□□□□□ -0.61
NCK1-202ENST00000460960 DCUN1D4Q92564 292 aa11.27□□□□□ -0.61
NCK1-202ENST00000460960 SEC22CQ9BRL7 303 aa11.27□□□□□ -0.61
NCK1-202ENST00000460960 CACNG5Q9UF02 275 aa11.27□□□□□ -0.61
NCK1-202ENST00000460960 PRNDQ9UKY0 176 aa11.27□□□□□ -0.61
NCK1-202ENST00000460960 HLA-AP01891 365 aaKnown RBP11.26□□□□□ -0.61
NCK1-202ENST00000460960 FGF2P09038 288 aa11.26□□□□□ -0.61
NCK1-202ENST00000460960 GP9P14770 177 aa11.26□□□□□ -0.61
NCK1-202ENST00000460960 CTRB1P17538 263 aa11.26□□□□□ -0.61
NCK1-202ENST00000460960 PSMB6P28072 239 aa11.26□□□□□ -0.61
NCK1-202ENST00000460960 MFAP2P55001 183 aa11.26□□□□□ -0.61
NCK1-202ENST00000460960 CTRB2Q6GPI1 263 aa11.26□□□□□ -0.61
NCK1-202ENST00000460960 LYG2Q86SG7 212 aa11.26□□□□□ -0.61
NCK1-202ENST00000460960 LGI3Q8N145 548 aa11.26□□□□□ -0.61
NCK1-202ENST00000460960 RNASE11Q8TAA1 199 aaKnown RBP11.26□□□□□ -0.61
NCK1-202ENST00000460960 IL22RA2Q969J5 263 aa11.26□□□□□ -0.61
NCK1-202ENST00000460960 RRNAD1Q96FB5 475 aaKnown RBP11.26□□□□□ -0.61
NCK1-202ENST00000460960 FANCD2OSQ96PS1 177 aa11.26□□□□□ -0.61
NCK1-202ENST00000460960 TSC22D3Q99576 134 aa11.26□□□□□ -0.61
NCK1-202ENST00000460960 A0A0B4J2A0 478 aa11.25□□□□□ -0.61
NCK1-202ENST00000460960 NPIPB5A8MRT5 1133 aa11.25□□□□□ -0.61
NCK1-202ENST00000460960 MPTX1A8MV57 137 aa11.25□□□□□ -0.61
NCK1-202ENST00000460960 ADAP1O75689 374 aa11.25□□□□□ -0.61
NCK1-202ENST00000460960 CRYGCP07315 174 aa11.25□□□□□ -0.61
NCK1-202ENST00000460960 H2AFB2P0C5Z0 115 aa11.25□□□□□ -0.61
NCK1-202ENST00000460960 OR13C7P0DN81 318 aa11.25□□□□□ -0.61
NCK1-202ENST00000460960 MZT2BQ6NZ67 158 aa11.25□□□□□ -0.61
NCK1-202ENST00000460960 LSM10Q969L4 123 aaKnown RBP11.25□□□□□ -0.61
NCK1-202ENST00000460960 UBE2E2Q96LR5 201 aa11.25□□□□□ -0.61
NCK1-202ENST00000460960 TMEM68Q96MH6 324 aa11.25□□□□□ -0.61
NCK1-202ENST00000460960 SHPKQ9UHJ6 478 aa11.25□□□□□ -0.61
NCK1-202ENST00000460960 S4R3C0 116 aa11.25□□□□□ -0.61
NCK1-202ENST00000460960 TRBV9A0A0B4J1U6 114 aa11.24□□□□□ -0.61
NCK1-202ENST00000460960 I3L521 148 aa11.24□□□□□ -0.61
NCK1-202ENST00000460960 OR2J3O76001 311 aa11.24□□□□□ -0.61
NCK1-202ENST00000460960 NDUFB8O95169 186 aa11.24□□□□□ -0.61
NCK1-202ENST00000460960 TRBV12-3P01733 135 aa11.24□□□□□ -0.61
NCK1-202ENST00000460960 HOXB5P09067 269 aa11.24□□□□□ -0.61
NCK1-202ENST00000460960 ANXA3P12429 323 aa11.24□□□□□ -0.61
NCK1-202ENST00000460960 SLURP1P55000 103 aa11.24□□□□□ -0.61
NCK1-202ENST00000460960 HSPE1P61604 102 aaKnown RBP11.24□□□□□ -0.61
NCK1-202ENST00000460960 RHOGP84095 191 aa11.24□□□□□ -0.61
NCK1-202ENST00000460960 PRCDQ00LT1 54 aa11.24□□□□□ -0.61
NCK1-202ENST00000460960 C4orf46Q504U0 113 aa11.24□□□□□ -0.61
NCK1-202ENST00000460960 FAM219AQ8IW50 185 aa11.24□□□□□ -0.61
NCK1-202ENST00000460960 LRTM2Q8N967 370 aa11.24□□□□□ -0.61
NCK1-202ENST00000460960 OR5B3Q8NH48 314 aa11.24□□□□□ -0.61
NCK1-202ENST00000460960 ENKURQ8TC29 256 aa11.24□□□□□ -0.61
NCK1-202ENST00000460960 ZNF257Q9Y2Q1 563 aa11.24□□□□□ -0.61
NCK1-202ENST00000460960 H3BUA1 57 aa11.23□□□□□ -0.61
NCK1-202ENST00000460960 ATG12O94817 140 aa11.23□□□□□ -0.61
NCK1-202ENST00000460960 MECP2P51608 486 aaKnown RBP11.23□□□□□ -0.61
NCK1-202ENST00000460960 AARDQ4LEZ3 155 aa11.23□□□□□ -0.61
NCK1-202ENST00000460960 DUSP18Q8NEJ0 188 aa11.23□□□□□ -0.61
NCK1-202ENST00000460960 DLX4Q92988 240 aaPredicted RBP11.23□□□□□ -0.61
NCK1-202ENST00000460960 FKBP11Q9NYL4 201 aa11.23□□□□□ -0.61
NCK1-202ENST00000460960 DNAH1Q9P2D7 4330 aa11.23□□□□□ -0.61
NCK1-202ENST00000460960 LYSTQ99698 3801 aa11.23□□□□□ -0.61
NCK1-202ENST00000460960 IGLV11-55A0A075B6I3 123 aa11.22□□□□□ -0.61
NCK1-202ENST00000460960 BRI3O95415 125 aa11.22□□□□□ -0.61
NCK1-202ENST00000460960 IFNA17P01571 189 aa11.22□□□□□ -0.61
NCK1-202ENST00000460960 IGHV3-23P01764 117 aa11.22□□□□□ -0.61
NCK1-202ENST00000460960 SULT1A3P0DMM9 295 aa11.22□□□□□ -0.61
NCK1-202ENST00000460960 SULT1A4P0DMN0 295 aa11.22□□□□□ -0.61
NCK1-202ENST00000460960 SRPXP78539 464 aa11.22□□□□□ -0.61
NCK1-202ENST00000460960 GGNBP1Q5YKI7 109 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms