RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 OR1L6Q8NGR2 347 aa13.24□□□□□ -0.29
USP39-208ENST00000455732 GLYATL2Q8WU03 294 aa13.24□□□□□ -0.29
USP39-208ENST00000455732 HINT2Q9BX68 163 aa13.24□□□□□ -0.29
USP39-208ENST00000455732 SRRQ9GZT4 340 aa13.24□□□□□ -0.29
USP39-208ENST00000455732 SIGLEC8Q9NYZ4 499 aa13.24□□□□□ -0.29
USP39-208ENST00000455732 GGCTO75223 188 aaKnown RBP13.23□□□□□ -0.29
USP39-208ENST00000455732 DHODHQ02127 395 aa13.23□□□□□ -0.29
USP39-208ENST00000455732 IL34Q6ZMJ4 242 aa13.23□□□□□ -0.29
USP39-208ENST00000455732 FAM219AQ8IW50 185 aa13.23□□□□□ -0.29
USP39-208ENST00000455732 ZNF114Q8NC26 417 aa13.23□□□□□ -0.29
USP39-208ENST00000455732 ZNF502Q8TBZ5 544 aa13.23□□□□□ -0.29
USP39-208ENST00000455732 VN1R17PQ8TDU5 208 aa13.23□□□□□ -0.29
USP39-208ENST00000455732 TMEM230Q96A57 120 aa13.23□□□□□ -0.29
USP39-208ENST00000455732 GALNT14Q96FL9 552 aa13.23□□□□□ -0.29
USP39-208ENST00000455732 B9D2Q9BPU9 175 aa13.23□□□□□ -0.29
USP39-208ENST00000455732 A0A0B4J293 547 aa13.22□□□□□ -0.29
USP39-208ENST00000455732 PPP5D1E7EU14 171 aa13.22□□□□□ -0.29
USP39-208ENST00000455732 INS-IGF2F8WCM5 200 aa13.22□□□□□ -0.29
USP39-208ENST00000455732 IGLV1-51P01701 117 aa13.22□□□□□ -0.29
USP39-208ENST00000455732 MECP2P51608 486 aaKnown RBP13.22□□□□□ -0.29
USP39-208ENST00000455732 SGPP2Q8IWX5 399 aa13.22□□□□□ -0.29
USP39-208ENST00000455732 OR2C3Q8N628 320 aa13.22□□□□□ -0.29
USP39-208ENST00000455732 OR1P1Q8NH06 330 aa13.22□□□□□ -0.29
USP39-208ENST00000455732 LHFPL5Q8TAF8 219 aa13.22□□□□□ -0.29
USP39-208ENST00000455732 RBPMSQ93062 196 aaKnown RBP13.22□□□□□ -0.29
USP39-208ENST00000455732 RRNAD1Q96FB5 475 aaKnown RBP13.22□□□□□ -0.29
USP39-208ENST00000455732 ATP6V0BQ99437 205 aa13.22□□□□□ -0.29
USP39-208ENST00000455732 PEMTQ9UBM1 199 aa13.22□□□□□ -0.29
USP39-208ENST00000455732 IGHV3-23P01764 117 aa13.21□□□□□ -0.29
USP39-208ENST00000455732 ARL3P36405 182 aa13.21□□□□□ -0.29
USP39-208ENST00000455732 MFAP2P55001 183 aa13.21□□□□□ -0.29
USP39-208ENST00000455732 IZUMO4Q1ZYL8 232 aa13.21□□□□□ -0.29
USP39-208ENST00000455732 AARDQ4LEZ3 155 aa13.21□□□□□ -0.29
USP39-208ENST00000455732 CLEC19AQ6UXS0 136 aa13.21□□□□□ -0.29
USP39-208ENST00000455732 TMEM56-RWDD3S4R434 201 aa13.21□□□□□ -0.29
USP39-208ENST00000455732 A0A0G2JRQ6 117 aa13.2□□□□□ -0.3
USP39-208ENST00000455732 LGALS9O00182 355 aa13.2□□□□□ -0.3
USP39-208ENST00000455732 CSN3P07498 182 aa13.2□□□□□ -0.3
USP39-208ENST00000455732 CD69Q07108 199 aa13.2□□□□□ -0.3
USP39-208ENST00000455732 SLC25A24Q6NUK1 477 aa13.2□□□□□ -0.3
USP39-208ENST00000455732 GPHB5Q86YW7 130 aa13.2□□□□□ -0.3
USP39-208ENST00000455732 SELENOHQ8IZQ5 122 aaKnown RBP13.2□□□□□ -0.3
USP39-208ENST00000455732 IL22RA2Q969J5 263 aa13.2□□□□□ -0.3
USP39-208ENST00000455732 PLEKHA3Q9HB20 300 aa13.2□□□□□ -0.3
USP39-208ENST00000455732 KCNIP3Q9Y2W7 256 aa13.2□□□□□ -0.3
USP39-208ENST00000455732 S4R3C0 116 aa13.2□□□□□ -0.3
USP39-208ENST00000455732 ST8SIA3O43173 380 aa13.19□□□□□ -0.3
USP39-208ENST00000455732 CLEC3BP05452 202 aa13.19□□□□□ -0.3
USP39-208ENST00000455732 SPNP16150 400 aa13.19□□□□□ -0.3
USP39-208ENST00000455732 SUPT4H1P63272 117 aaKnown RBP13.19□□□□□ -0.3
USP39-208ENST00000455732 TMEM187Q14656 261 aa13.19□□□□□ -0.3
USP39-208ENST00000455732 C11orf87Q6NUJ2 197 aa13.19□□□□□ -0.3
USP39-208ENST00000455732 RNASE11Q8TAA1 199 aaKnown RBP13.19□□□□□ -0.3
USP39-208ENST00000455732 SLC25A21Q9BQT8 299 aaPredicted RBP13.19□□□□□ -0.3
USP39-208ENST00000455732 A8MWP6 167 aa13.18□□□□□ -0.3
USP39-208ENST00000455732 K7EIM0 57 aa13.18□□□□□ -0.3
USP39-208ENST00000455732 OR2C1O95371 312 aa13.18□□□□□ -0.3
USP39-208ENST00000455732 HLA-AP01891 365 aaKnown RBP13.18□□□□□ -0.3
USP39-208ENST00000455732 GP9P14770 177 aa13.18□□□□□ -0.3
USP39-208ENST00000455732 GPR183P32249 361 aa13.18□□□□□ -0.3
USP39-208ENST00000455732 ERHP84090 104 aaKnown RBP13.18□□□□□ -0.3
USP39-208ENST00000455732 TMEM268Q5VZI3 342 aa13.18□□□□□ -0.3
USP39-208ENST00000455732 SLC35G3Q8N808 338 aa13.18□□□□□ -0.3
USP39-208ENST00000455732 SDHCQ99643 169 aaPredicted RBP13.18□□□□□ -0.3
USP39-208ENST00000455732 PDCD10Q9BUL8 212 aa13.18□□□□□ -0.3
USP39-208ENST00000455732 C21orf62Q9NYP8 219 aa13.18□□□□□ -0.3
USP39-208ENST00000455732 NBEAL2Q6ZNJ1 2754 aa13.18□□□□□ -0.3
USP39-208ENST00000455732 KMT2CQ8NEZ4 4911 aaKnown RBP13.18□□□□□ -0.3
USP39-208ENST00000455732 TGOLN2O43493 480 aa13.17□□□□□ -0.3
USP39-208ENST00000455732 LY86O95711 162 aa13.17□□□□□ -0.3
USP39-208ENST00000455732 IFNA17P01571 189 aa13.17□□□□□ -0.3
USP39-208ENST00000455732 SRPXP78539 464 aa13.17□□□□□ -0.3
USP39-208ENST00000455732 BAK1Q16611 211 aa13.17□□□□□ -0.3
USP39-208ENST00000455732 FAM106AQ4KMX7 169 aa13.17□□□□□ -0.3
USP39-208ENST00000455732 TRIQKQ629K1 86 aa13.17□□□□□ -0.3
USP39-208ENST00000455732 ZNF57Q68EA5 555 aaPredicted RBP13.17□□□□□ -0.3
USP39-208ENST00000455732 Q6ZRM9 215 aa13.17□□□□□ -0.3
USP39-208ENST00000455732 HAPLN4Q86UW8 402 aa13.17□□□□□ -0.3
USP39-208ENST00000455732 OR2K2Q8NGT1 345 aa13.17□□□□□ -0.3
USP39-208ENST00000455732 OR52E5Q8NH55 327 aa13.17□□□□□ -0.3
USP39-208ENST00000455732 SCARB1Q8WTV0 552 aa13.17□□□□□ -0.3
USP39-208ENST00000455732 BSCL2Q96G97 398 aaPredicted RBP13.17□□□□□ -0.3
USP39-208ENST00000455732 PIGBOS1A0A0B4J2F0 54 aa13.16□□□□□ -0.3
USP39-208ENST00000455732 NAP1L6A6NFF2 107 aa13.16□□□□□ -0.3
USP39-208ENST00000455732 ANXA3P12429 323 aa13.16□□□□□ -0.3
USP39-208ENST00000455732 AKR1C4P17516 323 aa13.16□□□□□ -0.3
USP39-208ENST00000455732 FCGR2BP31994 310 aaPredicted RBP13.16□□□□□ -0.3
USP39-208ENST00000455732 TMEM128Q5BJH2 165 aa13.16□□□□□ -0.3
USP39-208ENST00000455732 PVRIGQ6DKI7 326 aa13.16□□□□□ -0.3
USP39-208ENST00000455732 SPSB3Q6PJ21 355 aa13.16□□□□□ -0.3
USP39-208ENST00000455732 ADAMTSL5Q6ZMM2 481 aa13.16□□□□□ -0.3
USP39-208ENST00000455732 GPR146Q96CH1 333 aa13.16□□□□□ -0.3
USP39-208ENST00000455732 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.16□□□□□ -0.3
USP39-208ENST00000455732 CACFD1Q9UGQ2 172 aa13.16□□□□□ -0.3
USP39-208ENST00000455732 A0A0B4J2A0 478 aa13.15□□□□□ -0.3
USP39-208ENST00000455732 C2orf70A6NJV1 201 aa13.15□□□□□ -0.3
USP39-208ENST00000455732 F8W735 103 aaPredicted RBP13.15□□□□□ -0.3
USP39-208ENST00000455732 I3L2K1 104 aa13.15□□□□□ -0.3
USP39-208ENST00000455732 HOXA1P49639 335 aaPredicted RBP13.15□□□□□ -0.3
USP39-208ENST00000455732 SPCS3P61009 180 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms