RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 LAMP3Q9UQV4 416 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 SAA2-SAA4A0A096LPE2 208 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 TRAV1-1A0A0B4J248 108 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 TMPRSS2O15393 492 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 SAA2P0DJI9 122 aaPredicted RBP9.93□□□□□ -0.82
COL27A1-202ENST00000451716 CGB3P0DN86 165 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 CGB7P0DN87 165 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 BCL2P10415 239 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 GATA4P43694 442 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 CR1LQ2VPA4 569 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 SAMD13Q5VXD3 122 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 ZCCHC14Q8WYQ9 949 aaKnown RBP9.93□□□□□ -0.82
COL27A1-202ENST00000451716 S1PR3Q99500 378 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 TMEM147Q9BVK8 224 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 SMPXQ9UHP9 88 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 TACC2O95359 2948 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 KBTBD11-OT1A0A1B0GTJ5 212 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 C15orf62A8K5M9 175 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 THBDP07204 575 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 CEACAM3P40198 252 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 C3orf36Q3SXR2 165 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 OR4A16Q8NH70 328 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 MBD3L1Q8WWY6 194 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 LHX4Q969G2 390 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 SLC39A9Q9NUM3 307 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 TANC2Q9HCD6 1990 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 TRGV10A0A0A0MS01 117 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 GNG7O60262 68 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 CLEC3BP05452 202 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 TNFSF4P23510 183 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 LGALS7P47929 136 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 ADIPOQQ15848 244 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 MRGPRGQ86SM5 289 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 TCTEX1D1Q8N7M0 179 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 GATAD1Q8WUU5 269 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 CACNG8Q8WXS5 425 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 SDSLQ96GA7 329 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 NIPSNAP3BQ9BS92 247 aa9.93□□□□□ -0.82
COL27A1-202ENST00000451716 ABCA4P78363 2273 aa9.92□□□□□ -0.82
COL27A1-202ENST00000451716 FAM87AP0C7U9 286 aa9.92□□□□□ -0.82
COL27A1-202ENST00000451716 MYOD1P15172 320 aa9.92□□□□□ -0.82
COL27A1-202ENST00000451716 MMDQ15546 238 aa9.92□□□□□ -0.82
COL27A1-202ENST00000451716 GCSAMLQ5JQS6 135 aa9.92□□□□□ -0.82
COL27A1-202ENST00000451716 FFAR4Q5NUL3 377 aa9.92□□□□□ -0.82
COL27A1-202ENST00000451716 PRR27Q6MZM9 219 aa9.92□□□□□ -0.82
COL27A1-202ENST00000451716 ABHD12Q8N2K0 398 aa9.92□□□□□ -0.82
COL27A1-202ENST00000451716 ZNF738Q8NE65 137 aa9.92□□□□□ -0.82
COL27A1-202ENST00000451716 CIB3Q96Q77 187 aaPredicted RBP9.92□□□□□ -0.82
COL27A1-202ENST00000451716 NPCDR1Q9BY65 106 aa9.92□□□□□ -0.82
COL27A1-202ENST00000451716 TMEM140Q9NV12 185 aa9.92□□□□□ -0.82
COL27A1-202ENST00000451716 RRHO14718 337 aa9.92□□□□□ -0.82
COL27A1-202ENST00000451716 TBR1Q16650 682 aa9.92□□□□□ -0.82
COL27A1-202ENST00000451716 FAM90A2PQ658T7 463 aa9.92□□□□□ -0.82
COL27A1-202ENST00000451716 HEYLQ9NQ87 328 aaPredicted RBP9.92□□□□□ -0.82
COL27A1-202ENST00000451716 CRYGCP07315 174 aa9.91□□□□□ -0.82
COL27A1-202ENST00000451716 ERVK-16P61578 105 aa9.91□□□□□ -0.82
COL27A1-202ENST00000451716 RBPJQ06330 500 aa9.91□□□□□ -0.82
COL27A1-202ENST00000451716 ZNF788Q6ZQV5 615 aa9.91□□□□□ -0.82
COL27A1-202ENST00000451716 TMEM144Q7Z5S9 345 aa9.91□□□□□ -0.82
COL27A1-202ENST00000451716 OR10G4Q8NGN3 311 aa9.91□□□□□ -0.82
COL27A1-202ENST00000451716 OR10G9Q8NGN4 311 aa9.91□□□□□ -0.82
COL27A1-202ENST00000451716 OR10G7Q8NGN6 311 aa9.91□□□□□ -0.82
COL27A1-202ENST00000451716 ZNF705FA8MVS1 300 aaPredicted RBP9.91□□□□□ -0.82
COL27A1-202ENST00000451716 ZNF705DP0CH99 300 aaPredicted RBP9.91□□□□□ -0.82
COL27A1-202ENST00000451716 ZNF705BP0CI00 300 aaPredicted RBP9.91□□□□□ -0.82
COL27A1-202ENST00000451716 RELBQ01201 579 aa9.91□□□□□ -0.82
COL27A1-202ENST00000451716 TDRG1Q3Y452 100 aa9.91□□□□□ -0.82
COL27A1-202ENST00000451716 DDB2Q92466 427 aa9.91□□□□□ -0.82
COL27A1-202ENST00000451716 NEUROG1Q92886 237 aa9.91□□□□□ -0.82
COL27A1-202ENST00000451716 TVP23CQ96ET8 276 aa9.91□□□□□ -0.82
COL27A1-202ENST00000451716 CISD1Q9NZ45 108 aaKnown RBP9.91□□□□□ -0.82
COL27A1-202ENST00000451716 COL8A2P25067 703 aa9.9□□□□□ -0.82
COL27A1-202ENST00000451716 NUP37Q8NFH4 326 aa9.9□□□□□ -0.82
COL27A1-202ENST00000451716 OR1P1Q8NH06 330 aa9.9□□□□□ -0.82
COL27A1-202ENST00000451716 CCL17Q92583 94 aa9.9□□□□□ -0.82
COL27A1-202ENST00000451716 HIF1ANQ9NWT6 349 aa9.9□□□□□ -0.82
COL27A1-202ENST00000451716 C17orf100A8MU93 164 aa9.9□□□□□ -0.82
COL27A1-202ENST00000451716 PMS2P11Q13670 270 aa9.9□□□□□ -0.82
COL27A1-202ENST00000451716 ZNF709Q8N972 641 aa9.9□□□□□ -0.82
COL27A1-202ENST00000451716 RND1Q92730 232 aa9.9□□□□□ -0.82
COL27A1-202ENST00000451716 HINT2Q9BX68 163 aa9.9□□□□□ -0.82
COL27A1-202ENST00000451716 FKBP11Q9NYL4 201 aa9.9□□□□□ -0.82
COL27A1-202ENST00000451716 COX11Q9Y6N1 276 aa9.9□□□□□ -0.82
COL27A1-202ENST00000451716 DCHS2Q6V1P9 2916 aa9.9□□□□□ -0.83
COL27A1-202ENST00000451716 FCN3O75636 299 aa9.89□□□□□ -0.83
COL27A1-202ENST00000451716 GNB2P62879 340 aa9.89□□□□□ -0.83
COL27A1-202ENST00000451716 TMEM170AQ8WVE7 144 aa9.89□□□□□ -0.83
COL27A1-202ENST00000451716 TBL2Q9Y4P3 447 aaKnown RBP9.89□□□□□ -0.83
COL27A1-202ENST00000451716 IGKV1-16P04430 117 aa9.89□□□□□ -0.83
COL27A1-202ENST00000451716 CCL3L1P16619 93 aa9.89□□□□□ -0.83
COL27A1-202ENST00000451716 CD1BP29016 333 aa9.89□□□□□ -0.83
COL27A1-202ENST00000451716 TMEM241Q24JQ0 296 aa9.89□□□□□ -0.83
COL27A1-202ENST00000451716 UNQ5815/PRO19632Q6UWF5 114 aa9.89□□□□□ -0.83
COL27A1-202ENST00000451716 CENPVQ7Z7K6 275 aaPredicted RBP9.89□□□□□ -0.83
COL27A1-202ENST00000451716 OR4S2Q8NH73 311 aa9.89□□□□□ -0.83
COL27A1-202ENST00000451716 TMEM186Q96B77 213 aa9.89□□□□□ -0.83
COL27A1-202ENST00000451716 VAX2Q9UIW0 290 aa9.89□□□□□ -0.83
COL27A1-202ENST00000451716 TIMM9Q9Y5J7 89 aa9.89□□□□□ -0.83
COL27A1-202ENST00000451716 SVEP1Q4LDE5 3571 aa9.89□□□□□ -0.83
COL27A1-202ENST00000451716 MAP1AP78559 2803 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms