RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 PEF1Q9UBV8 284 aaKnown RBP4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 ANXA10Q9UJ72 324 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 NUBP2Q9Y5Y2 271 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 ARPC1BO15143 372 aaKnown RBP4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 CD55P08174 381 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 HKR1P10072 659 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 VOPP1Q96AW1 172 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 BCL7BQ9BQE9 202 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 AK3Q9UIJ7 227 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 MAST4O15021 2626 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 TRAV30A0A087WSZ9 112 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 UPK1BO75841 260 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 LIMS3P0CW19 117 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 LIMS4P0CW20 117 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 EVI2AP22794 236 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 KIAA0141Q14154 515 aaPredicted RBP4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 ACTL10Q5JWF8 245 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 ZNF429Q86V71 674 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 C11orf42Q8N5U0 333 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 OSR1Q8TAX0 266 aaPredicted RBP4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 PGLYRP3Q96LB9 341 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 OPN4Q9UHM6 478 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 DFFBO76075 338 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 ANOS1P23352 680 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 FCGR2BP31994 310 aaPredicted RBP4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 MOGAT2Q3SYC2 334 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 TPTE2P1Q5T6R2 138 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 LYPD2Q6UXB3 125 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 TMEM86BQ8N661 226 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 OR4C16Q8NGL9 310 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 FAM103A1Q9BTL3 118 aaKnown RBP4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 RPRMQ9NS64 109 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 KLHDC2Q9Y2U9 406 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 F8W036 122 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 ICMTO60725 284 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 CFPP27918 469 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 HRH1P35367 487 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 EFNB1P98172 346 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 SIGLEC9Q9Y336 463 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 ZNF701M0R085 212 aaPredicted RBP4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 SOX15O60248 233 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 CCKARP32238 428 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 KCNK7Q9Y2U2 307 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 IGLV2-23P01705 113 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 C1QCP02747 245 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 IAPPP10997 89 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 GZMMP51124 257 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 TCTAP57738 103 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 AUNIPQ9H7T9 357 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 HSPB8Q9UJY1 196 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 IGHV3OR16-8A0A075B7F1 116 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 TRAV14DV4A0A0A6YYC5 116 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 VENTXO95231 258 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 MT-ND6P03923 174 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 SELLP14151 372 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 UBE2V2Q15819 145 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 OR51B2Q9Y5P1 312 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 GALP22466 123 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 HLA-DRB5Q30154 266 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 TMEM200BQ69YZ2 307 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 FAM159AQ6UWV7 190 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 PRADC1Q9BSG0 188 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 QTRT1Q9BXR0 403 aaKnown RBP4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 ARV1Q9H2C2 271 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 ORM1P02763 201 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 HSPB1P04792 205 aaKnown RBP4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 IGHV4-38-2P0DP08 117 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 RCC1P18754 421 aaPredicted RBP4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 G6PCP35575 357 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 ZNF660Q6AZW8 331 aaPredicted RBP4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 OR5AP2Q8NGF4 316 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 PACRGQ96M98 296 aaPredicted RBP4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 WFDC6Q9BQY6 131 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 PRAF2O60831 178 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 WISP2O76076 250 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 PPYP01298 95 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 CD5P06127 495 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 PI3P19957 117 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 TCF24Q7RTU0 167 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 TMEM252Q8N6L7 170 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 Q8TCH9 128 aa4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 LSM10Q969L4 123 aaKnown RBP4.62□□□□□ -1.67
CDC42BPA-209ENST00000448940 PTPRSQ13332 1948 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 WIPF3A6NGB9 483 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 C12orf77C9JDV5 145 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 LDLRAD4O15165 306 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 NHLRC4P0CG21 123 aaPredicted RBP4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 FXYD7P58549 80 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 CLRN3Q8NCR9 226 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 MSGN1A6NI15 193 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 SOCS1O15524 211 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 KBTBD11O94819 623 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 VSIG8P0DPA2 414 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 SMUG1Q53HV7 270 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 CFAP161Q6P656 301 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 TOMM20LQ6UXN7 152 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 BCL6BQ8N143 479 aaPredicted RBP4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 OR51J1Q9H342 316 aa4.61□□□□□ -1.67
CDC42BPA-209ENST00000448940 CCL28Q9NRJ3 127 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms