RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 ZNF184Q99676 751 aaPredicted RBP4.19□□□□□ -1.74
USP49-205ENST00000448078 PLEKHJ1Q9NW61 149 aa4.19□□□□□ -1.74
USP49-205ENST00000448078 TAS2R4Q9NYW5 299 aa4.19□□□□□ -1.74
USP49-205ENST00000448078 ORC6Q9Y5N6 252 aa4.19□□□□□ -1.74
USP49-205ENST00000448078 SELENOKQ9Y6D0 94 aa4.19□□□□□ -1.74
USP49-205ENST00000448078 IGLV2-18A0A075B6J9 118 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 A0A1B0GU03 582 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 DNASE2O00115 360 aaPredicted RBP4.18□□□□□ -1.74
USP49-205ENST00000448078 PRH1P02810 166 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 EIF4EP06730 217 aaKnown RBP4.18□□□□□ -1.74
USP49-205ENST00000448078 UBBP0CG47 229 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 RBMY1A1P0DJD3 496 aaKnown RBP4.18□□□□□ -1.74
USP49-205ENST00000448078 MAS1LP35410 378 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 DAPP51397 102 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 PSMD7P51665 324 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 DEFA5Q01523 94 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 HMGN3Q15651 99 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 CCDC58Q4VC31 144 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 CGB2Q6NT52 195 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 RPL22L1Q6P5R6 122 aaKnown RBP4.18□□□□□ -1.74
USP49-205ENST00000448078 MORN3Q6PF18 240 aaPredicted RBP4.18□□□□□ -1.74
USP49-205ENST00000448078 TMPRSS11AQ6ZMR5 421 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 LHFPL3Q86UP9 236 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 STHQ8IWL8 128 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 HS3ST5Q8IZT8 346 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 CANT1Q8WVQ1 401 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 TMEM190Q8WZ59 177 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 FRZBQ92765 325 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 PDCD1LG2Q9BQ51 273 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 ATG101Q9BSB4 218 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 URM1Q9BTM9 101 aaKnown RBP4.18□□□□□ -1.74
USP49-205ENST00000448078 C20orf24Q9BUV8 137 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 KCNK15Q9H427 330 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 BANF2Q9H503 90 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 DAZ1Q9NQZ3 744 aaKnown RBP4.18□□□□□ -1.74
USP49-205ENST00000448078 CACNG5Q9UF02 275 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 PRELID3BQ9Y3B1 194 aa4.18□□□□□ -1.74
USP49-205ENST00000448078 IGLV9-49A0A0B4J1Y8 123 aa4.17□□□□□ -1.74
USP49-205ENST00000448078 IGKV3D-20A0A0C4DH25 116 aa4.17□□□□□ -1.74
USP49-205ENST00000448078 C15orf61A6NNL5 157 aa4.17□□□□□ -1.74
USP49-205ENST00000448078 K7EMT4 169 aa4.17□□□□□ -1.74
USP49-205ENST00000448078 DFFBO76075 338 aa4.17□□□□□ -1.74
USP49-205ENST00000448078 CRYGBP07316 175 aa4.17□□□□□ -1.74
USP49-205ENST00000448078 CTSDP07339 412 aaPredicted RBP4.17□□□□□ -1.74
USP49-205ENST00000448078 NUTF2P61970 127 aaKnown RBP4.17□□□□□ -1.74
USP49-205ENST00000448078 IRF3Q14653 427 aa4.17□□□□□ -1.74
USP49-205ENST00000448078 ZC2HC1BQ5TFG8 222 aa4.17□□□□□ -1.74
USP49-205ENST00000448078 APRG1Q8IVJ8 170 aa4.17□□□□□ -1.74
USP49-205ENST00000448078 OR10J5Q8NHC4 309 aa4.17□□□□□ -1.74
USP49-205ENST00000448078 SGK494Q96LW2 274 aa4.17□□□□□ -1.74
USP49-205ENST00000448078 OR2A7Q96R45 310 aa4.17□□□□□ -1.74
USP49-205ENST00000448078 AGMATQ9BSE5 352 aa4.17□□□□□ -1.74
USP49-205ENST00000448078 FAAP24Q9BTP7 215 aa4.17□□□□□ -1.74
USP49-205ENST00000448078 GFRA4Q9GZZ7 299 aa4.17□□□□□ -1.74
USP49-205ENST00000448078 ISG20L2Q9H9L3 353 aaKnown RBP4.17□□□□□ -1.74
USP49-205ENST00000448078 ZNF581Q9P0T4 197 aa4.17□□□□□ -1.74
USP49-205ENST00000448078 MRPS7Q9Y2R9 242 aaKnown RBP4.17□□□□□ -1.74
USP49-205ENST00000448078 TEX48A0A1B0GUV7 120 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 NDUFAF8A1L188 74 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 TMEM189A5PLL7 270 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 M0R129 80 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 NDUFA4O00483 81 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 FKBP6O75344 327 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 SLC22A5O76082 557 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 CRYZL1O95825 349 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 IGLV2-23P01705 113 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 IGHV3-23P01764 117 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 SPART-AS1P0CW21 52 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 SPP1P10451 314 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 PTBP1P26599 531 aaKnown RBP eCLIP4.16□□□□□ -1.74
USP49-205ENST00000448078 RPL27AP46776 148 aaKnown RBP4.16□□□□□ -1.74
USP49-205ENST00000448078 TFPI2P48307 235 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 MS4A2Q01362 244 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 CDK10Q15131 360 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 Q6ZR54 194 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 DUSP18Q8NEJ0 188 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 CCDC124Q96CT7 223 aaKnown RBP4.16□□□□□ -1.74
USP49-205ENST00000448078 LINC00479Q96M42 142 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 OPRPNQ99935 248 aaPredicted RBP4.16□□□□□ -1.74
USP49-205ENST00000448078 UQCC2Q9BRT2 126 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 FAM107BQ9H098 131 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 OR51E2Q9H255 320 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 ZNF430Q9H8G1 570 aaPredicted RBP4.16□□□□□ -1.74
USP49-205ENST00000448078 SLC2A9Q9NRM0 540 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 TMEM14BQ9NUH8 114 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 TBC1D24Q9ULP9 559 aa4.16□□□□□ -1.74
USP49-205ENST00000448078 EXOGQ9Y2C4 368 aaKnown RBP4.16□□□□□ -1.74
USP49-205ENST00000448078 HERC1Q15751 4861 aa4.15□□□□□ -1.74
USP49-205ENST00000448078 TRDCB7Z8K6 153 aa4.15□□□□□ -1.75
USP49-205ENST00000448078 E9PI62 339 aa4.15□□□□□ -1.75
USP49-205ENST00000448078 YIF1AO95070 293 aa4.15□□□□□ -1.75
USP49-205ENST00000448078 HRASP01112 189 aa4.15□□□□□ -1.75
USP49-205ENST00000448078 REG1AP05451 166 aa4.15□□□□□ -1.75
USP49-205ENST00000448078 RPA2P15927 270 aa4.15□□□□□ -1.75
USP49-205ENST00000448078 CRHBPP24387 322 aa4.15□□□□□ -1.75
USP49-205ENST00000448078 GPR183P32249 361 aa4.15□□□□□ -1.75
USP49-205ENST00000448078 FLOT2Q14254 428 aa4.15□□□□□ -1.75
USP49-205ENST00000448078 FCN2Q15485 313 aa4.15□□□□□ -1.75
USP49-205ENST00000448078 KDM4DQ6B0I6 523 aa4.15□□□□□ -1.75
USP49-205ENST00000448078 SSX9Q7RTT3 188 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms