RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 PRH1P02810 166 aa10.96□□□□□ -0.65
SSBP3-208ENST00000444533 OR8U8P0C7N1 319 aa10.96□□□□□ -0.65
SSBP3-208ENST00000444533 P0C879 139 aa10.96□□□□□ -0.65
SSBP3-208ENST00000444533 RUNX1Q01196 453 aa10.96□□□□□ -0.65
SSBP3-208ENST00000444533 ZNF616Q08AN1 781 aa10.96□□□□□ -0.65
SSBP3-208ENST00000444533 OR11H1Q8NG94 326 aa10.96□□□□□ -0.65
SSBP3-208ENST00000444533 OR1N2Q8NGR9 330 aa10.96□□□□□ -0.65
SSBP3-208ENST00000444533 OR52E5Q8NH55 327 aa10.96□□□□□ -0.65
SSBP3-208ENST00000444533 EEF1AKMT3Q96AZ1 226 aa10.96□□□□□ -0.65
SSBP3-208ENST00000444533 HIPK2Q9H2X6 1198 aa10.96□□□□□ -0.65
SSBP3-208ENST00000444533 GNB4Q9HAV0 340 aa10.96□□□□□ -0.65
SSBP3-208ENST00000444533 GPN1Q9HCN4 374 aaPredicted RBP10.96□□□□□ -0.65
SSBP3-208ENST00000444533 RANGRFQ9HD47 186 aaPredicted RBP10.96□□□□□ -0.65
SSBP3-208ENST00000444533 TRBV9A0A0B4J1U6 114 aa10.95□□□□□ -0.66
SSBP3-208ENST00000444533 CGB1A6NKQ9 187 aa10.95□□□□□ -0.66
SSBP3-208ENST00000444533 LINC01619G3V211 115 aa10.95□□□□□ -0.66
SSBP3-208ENST00000444533 HSPB1P04792 205 aaKnown RBP10.95□□□□□ -0.66
SSBP3-208ENST00000444533 HOXB5P09067 269 aa10.95□□□□□ -0.66
SSBP3-208ENST00000444533 SLC25A6P12236 298 aa10.95□□□□□ -0.66
SSBP3-208ENST00000444533 EXOSC2Q13868 293 aaKnown RBP10.95□□□□□ -0.66
SSBP3-208ENST00000444533 C15orf32Q32M92 178 aa10.95□□□□□ -0.66
SSBP3-208ENST00000444533 ANKRD55Q3KP44 614 aa10.95□□□□□ -0.66
SSBP3-208ENST00000444533 C18orf65Q6ZTR6 163 aa10.95□□□□□ -0.66
SSBP3-208ENST00000444533 NOXA1Q86UR1 476 aa10.95□□□□□ -0.66
SSBP3-208ENST00000444533 GPR61Q9BZJ8 451 aa10.95□□□□□ -0.66
SSBP3-208ENST00000444533 HEYLQ9NQ87 328 aaPredicted RBP10.95□□□□□ -0.66
SSBP3-208ENST00000444533 F11RQ9Y624 299 aaKnown RBP10.95□□□□□ -0.66
SSBP3-208ENST00000444533 TRBV7-1A0A0A6YYK4 115 aa10.94□□□□□ -0.66
SSBP3-208ENST00000444533 A0A0G2JRQ6 117 aa10.94□□□□□ -0.66
SSBP3-208ENST00000444533 A0A1B0GW64 132 aa10.94□□□□□ -0.66
SSBP3-208ENST00000444533 DBX1A6NMT0 343 aa10.94□□□□□ -0.66
SSBP3-208ENST00000444533 I3L521 148 aa10.94□□□□□ -0.66
SSBP3-208ENST00000444533 MED6O75586 246 aa10.94□□□□□ -0.66
SSBP3-208ENST00000444533 ZP3P21754 424 aa10.94□□□□□ -0.66
SSBP3-208ENST00000444533 WT1-ASQ06250 92 aa10.94□□□□□ -0.66
SSBP3-208ENST00000444533 KIAA0141Q14154 515 aaPredicted RBP10.94□□□□□ -0.66
SSBP3-208ENST00000444533 TATDN3Q17R31 274 aa10.94□□□□□ -0.66
SSBP3-208ENST00000444533 DEFB136Q30KP8 78 aa10.94□□□□□ -0.66
SSBP3-208ENST00000444533 SPINK9Q5DT21 86 aa10.94□□□□□ -0.66
SSBP3-208ENST00000444533 NMSQ5H8A3 153 aa10.94□□□□□ -0.66
SSBP3-208ENST00000444533 UXS1Q8NBZ7 420 aa10.94□□□□□ -0.66
SSBP3-208ENST00000444533 OR1P1Q8NH06 330 aa10.94□□□□□ -0.66
SSBP3-208ENST00000444533 RAX2Q96IS3 184 aa10.94□□□□□ -0.66
SSBP3-208ENST00000444533 MCRIP2Q9BUT9 160 aaKnown RBP10.94□□□□□ -0.66
SSBP3-208ENST00000444533 PEF1Q9UBV8 284 aaKnown RBP10.94□□□□□ -0.66
SSBP3-208ENST00000444533 ANKRD34BA5PLL1 514 aa10.93□□□□□ -0.66
SSBP3-208ENST00000444533 CORTO00230 105 aa10.93□□□□□ -0.66
SSBP3-208ENST00000444533 PRAF2O60831 178 aa10.93□□□□□ -0.66
SSBP3-208ENST00000444533 HTR2BP41595 481 aa10.93□□□□□ -0.66
SSBP3-208ENST00000444533 ZNF343Q6P1L6 599 aa10.93□□□□□ -0.66
SSBP3-208ENST00000444533 Q6ZRM9 215 aa10.93□□□□□ -0.66
SSBP3-208ENST00000444533 NRARPQ7Z6K4 114 aa10.93□□□□□ -0.66
SSBP3-208ENST00000444533 OR2C3Q8N628 320 aa10.93□□□□□ -0.66
SSBP3-208ENST00000444533 DUSP18Q8NEJ0 188 aa10.93□□□□□ -0.66
SSBP3-208ENST00000444533 ZNF431Q8TF32 576 aaPredicted RBP10.93□□□□□ -0.66
SSBP3-208ENST00000444533 MITD1Q8WV92 249 aa10.93□□□□□ -0.66
SSBP3-208ENST00000444533 MISP3Q96FF7 219 aa10.93□□□□□ -0.66
SSBP3-208ENST00000444533 PALMDQ9NP74 551 aa10.93□□□□□ -0.66
SSBP3-208ENST00000444533 GAR1Q9NY12 217 aaKnown RBP10.93□□□□□ -0.66
SSBP3-208ENST00000444533 IGLV11-55A0A075B6I3 123 aa10.92□□□□□ -0.66
SSBP3-208ENST00000444533 FAM90A26D6RGX4 464 aa10.92□□□□□ -0.66
SSBP3-208ENST00000444533 INS-IGF2F8WCM5 200 aa10.92□□□□□ -0.66
SSBP3-208ENST00000444533 WRBO00258 174 aa10.92□□□□□ -0.66
SSBP3-208ENST00000444533 SCGB2A1O75556 95 aa10.92□□□□□ -0.66
SSBP3-208ENST00000444533 NXPH3O95157 252 aa10.92□□□□□ -0.66
SSBP3-208ENST00000444533 LY86O95711 162 aa10.92□□□□□ -0.66
SSBP3-208ENST00000444533 RPP30P78346 268 aaKnown RBP10.92□□□□□ -0.66
SSBP3-208ENST00000444533 IFITM3Q01628 133 aa10.92□□□□□ -0.66
SSBP3-208ENST00000444533 TNFRSF9Q07011 255 aa10.92□□□□□ -0.66
SSBP3-208ENST00000444533 RPEL1Q2QD12 228 aa10.92□□□□□ -0.66
SSBP3-208ENST00000444533 AARDQ4LEZ3 155 aa10.92□□□□□ -0.66
SSBP3-208ENST00000444533 GGNBP1Q5YKI7 109 aa10.92□□□□□ -0.66
SSBP3-208ENST00000444533 ZNF114Q8NC26 417 aa10.92□□□□□ -0.66
SSBP3-208ENST00000444533 VN1R17PQ8TDU5 208 aa10.92□□□□□ -0.66
SSBP3-208ENST00000444533 RCC1LQ96I51 464 aaKnown RBP10.92□□□□□ -0.66
SSBP3-208ENST00000444533 DUX3Q96PT4 197 aa10.92□□□□□ -0.66
SSBP3-208ENST00000444533 P2RX4Q99571 388 aa10.92□□□□□ -0.66
SSBP3-208ENST00000444533 INMT-MINDY4F8WBC2 141 aa10.91□□□□□ -0.66
SSBP3-208ENST00000444533 IL5P05113 134 aa10.91□□□□□ -0.66
SSBP3-208ENST00000444533 DEFA5Q01523 94 aa10.91□□□□□ -0.66
SSBP3-208ENST00000444533 PDLIM3Q53GG5 364 aaPredicted RBP10.91□□□□□ -0.66
SSBP3-208ENST00000444533 C12orf45Q8N5I9 185 aaPredicted RBP10.91□□□□□ -0.66
SSBP3-208ENST00000444533 OR52B4Q8NGK2 314 aa10.91□□□□□ -0.66
SSBP3-208ENST00000444533 DTD1Q8TEA8 209 aa10.91□□□□□ -0.66
SSBP3-208ENST00000444533 FANCD2OSQ96PS1 177 aa10.91□□□□□ -0.66
SSBP3-208ENST00000444533 CIB3Q96Q77 187 aaPredicted RBP10.91□□□□□ -0.66
SSBP3-208ENST00000444533 HSPB7Q9UBY9 170 aa10.91□□□□□ -0.66
SSBP3-208ENST00000444533 ANK2Q01484 3957 aa10.91□□□□□ -0.66
SSBP3-208ENST00000444533 IGHV4OR15-8A0A075B7B6 117 aa10.9□□□□□ -0.66
SSBP3-208ENST00000444533 A0A087WW49 117 aa10.9□□□□□ -0.66
SSBP3-208ENST00000444533 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.9□□□□□ -0.66
SSBP3-208ENST00000444533 RPS10-NUDT3A0A1W2PQS6 291 aa10.9□□□□□ -0.66
SSBP3-208ENST00000444533 FAM25EA8MYX2 175 aa10.9□□□□□ -0.66
SSBP3-208ENST00000444533 NDUFB8O95169 186 aa10.9□□□□□ -0.66
SSBP3-208ENST00000444533 PTTG1O95997 202 aa10.9□□□□□ -0.66
SSBP3-208ENST00000444533 IFNA10P01566 189 aa10.9□□□□□ -0.66
SSBP3-208ENST00000444533 FHL3Q13643 280 aa10.9□□□□□ -0.66
SSBP3-208ENST00000444533 KLK9Q2XQG4 91 aa10.9□□□□□ -0.66
SSBP3-208ENST00000444533 ETV3LQ6ZN32 361 aa10.9□□□□□ -0.66
SSBP3-208ENST00000444533 C19orf35Q6ZS72 473 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms