RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 OR4C12Q96R67 309 aa16.61■□□□□ 0.25
TRAF4-205ENST00000444415 SDHCQ99643 169 aaPredicted RBP16.61■□□□□ 0.25
TRAF4-205ENST00000444415 TEX13DA0A0J9YY54 714 aaPredicted RBP16.6■□□□□ 0.25
TRAF4-205ENST00000444415 F8W735 103 aaPredicted RBP16.6■□□□□ 0.25
TRAF4-205ENST00000444415 OR2C1O95371 312 aa16.6■□□□□ 0.25
TRAF4-205ENST00000444415 AKR1C2P52895 323 aa16.6■□□□□ 0.25
TRAF4-205ENST00000444415 HSPE1P61604 102 aaKnown RBP16.6■□□□□ 0.25
TRAF4-205ENST00000444415 SPINK9Q5DT21 86 aa16.6■□□□□ 0.25
TRAF4-205ENST00000444415 OR2C3Q8N628 320 aa16.6■□□□□ 0.25
TRAF4-205ENST00000444415 ELOVL1Q9BW60 279 aa16.6■□□□□ 0.25
TRAF4-205ENST00000444415 PRR13Q9NZ81 148 aa16.6■□□□□ 0.25
TRAF4-205ENST00000444415 K7EIM0 57 aa16.59■□□□□ 0.25
TRAF4-205ENST00000444415 B3GALNT1O75752 331 aa16.59■□□□□ 0.25
TRAF4-205ENST00000444415 SUPT4H1P63272 117 aaKnown RBP16.59■□□□□ 0.25
TRAF4-205ENST00000444415 SELENOHQ8IZQ5 122 aaKnown RBP16.59■□□□□ 0.25
TRAF4-205ENST00000444415 TMEM56Q96MV1 263 aa16.59■□□□□ 0.25
TRAF4-205ENST00000444415 ZC4H2Q9NQZ6 224 aa16.59■□□□□ 0.25
TRAF4-205ENST00000444415 SIGLEC8Q9NYZ4 499 aa16.59■□□□□ 0.25
TRAF4-205ENST00000444415 SCP2D1Q9UJQ7 156 aa16.59■□□□□ 0.25
TRAF4-205ENST00000444415 TRBV7-1A0A0A6YYK4 115 aa16.58■□□□□ 0.24
TRAF4-205ENST00000444415 IGHV3-21A0A0B4J1V1 117 aa16.58■□□□□ 0.24
TRAF4-205ENST00000444415 ST8SIA3O43173 380 aa16.58■□□□□ 0.24
TRAF4-205ENST00000444415 GGCTO75223 188 aaKnown RBP16.58■□□□□ 0.24
TRAF4-205ENST00000444415 CLEC3BP05452 202 aa16.58■□□□□ 0.24
TRAF4-205ENST00000444415 ARL3P36405 182 aa16.58■□□□□ 0.24
TRAF4-205ENST00000444415 MECP2P51608 486 aaKnown RBP16.58■□□□□ 0.24
TRAF4-205ENST00000444415 BAK1Q16611 211 aa16.58■□□□□ 0.24
TRAF4-205ENST00000444415 FAM209BQ5JX69 171 aa16.58■□□□□ 0.24
TRAF4-205ENST00000444415 SLC25A24Q6NUK1 477 aa16.58■□□□□ 0.24
TRAF4-205ENST00000444415 TOMM5Q8N4H5 51 aa16.58■□□□□ 0.24
TRAF4-205ENST00000444415 GALNT14Q96FL9 552 aa16.58■□□□□ 0.24
TRAF4-205ENST00000444415 ZNF414Q96IQ9 312 aa16.58■□□□□ 0.24
TRAF4-205ENST00000444415 CXorf58Q96LI9 332 aa16.58■□□□□ 0.24
TRAF4-205ENST00000444415 LY86O95711 162 aa16.57■□□□□ 0.24
TRAF4-205ENST00000444415 GP9P14770 177 aa16.57■□□□□ 0.24
TRAF4-205ENST00000444415 GPR183P32249 361 aa16.57■□□□□ 0.24
TRAF4-205ENST00000444415 TMEM187Q14656 261 aa16.57■□□□□ 0.24
TRAF4-205ENST00000444415 ZNF114Q8NC26 417 aa16.57■□□□□ 0.24
TRAF4-205ENST00000444415 VN1R17PQ8TDU5 208 aa16.57■□□□□ 0.24
TRAF4-205ENST00000444415 IZUMO1RA6ND01 250 aa16.56■□□□□ 0.24
TRAF4-205ENST00000444415 AARDQ4LEZ3 155 aa16.56■□□□□ 0.24
TRAF4-205ENST00000444415 SPANXN2Q5MJ10 180 aa16.56■□□□□ 0.24
TRAF4-205ENST00000444415 GPHB5Q86YW7 130 aa16.56■□□□□ 0.24
TRAF4-205ENST00000444415 OR1P1Q8NH06 330 aa16.56■□□□□ 0.24
TRAF4-205ENST00000444415 SCARB1Q8WTV0 552 aa16.56■□□□□ 0.24
TRAF4-205ENST00000444415 RBPMSQ93062 196 aaKnown RBP16.56■□□□□ 0.24
TRAF4-205ENST00000444415 TMEM56-RWDD3S4R434 201 aa16.56■□□□□ 0.24
TRAF4-205ENST00000444415 UNQ9165/PRO28630Q6UXU0 137 aa16.55■□□□□ 0.24
TRAF4-205ENST00000444415 B9D2Q9BPU9 175 aa16.55■□□□□ 0.24
TRAF4-205ENST00000444415 THYN1Q9P016 225 aa16.55■□□□□ 0.24
TRAF4-205ENST00000444415 C2orf70A6NJV1 201 aa16.54■□□□□ 0.24
TRAF4-205ENST00000444415 INS-IGF2F8WCM5 200 aa16.54■□□□□ 0.24
TRAF4-205ENST00000444415 LGALS9O00182 355 aa16.54■□□□□ 0.24
TRAF4-205ENST00000444415 AP3S2P59780 193 aa16.54■□□□□ 0.24
TRAF4-205ENST00000444415 DHODHQ02127 395 aa16.54■□□□□ 0.24
TRAF4-205ENST00000444415 TATDN3Q17R31 274 aa16.54■□□□□ 0.24
TRAF4-205ENST00000444415 TMEM268Q5VZI3 342 aa16.54■□□□□ 0.24
TRAF4-205ENST00000444415 GPR146Q96CH1 333 aa16.54■□□□□ 0.24
TRAF4-205ENST00000444415 NDUFA13Q9P0J0 144 aa16.54■□□□□ 0.24
TRAF4-205ENST00000444415 DNAH7Q8WXX0 4024 aa16.54■□□□□ 0.24
TRAF4-205ENST00000444415 TMEM213A2RRL7 107 aa16.54■□□□□ 0.24
TRAF4-205ENST00000444415 I3L2K1 104 aa16.54■□□□□ 0.24
TRAF4-205ENST00000444415 CACNG8Q8WXS5 425 aa16.54■□□□□ 0.24
TRAF4-205ENST00000444415 CHRDL1Q9BU40 450 aa16.54■□□□□ 0.24
TRAF4-205ENST00000444415 PLEKHA3Q9HB20 300 aa16.54■□□□□ 0.24
TRAF4-205ENST00000444415 PEMTQ9UBM1 199 aa16.54■□□□□ 0.24
TRAF4-205ENST00000444415 IGHV3-35A0A0C4DH35 117 aa16.53■□□□□ 0.24
TRAF4-205ENST00000444415 OR2T8A6NH00 312 aa16.53■□□□□ 0.24
TRAF4-205ENST00000444415 A8MWP6 167 aa16.53■□□□□ 0.24
TRAF4-205ENST00000444415 ATG12O94817 140 aa16.53■□□□□ 0.24
TRAF4-205ENST00000444415 AKR1C4P17516 323 aa16.53■□□□□ 0.24
TRAF4-205ENST00000444415 ADMP35318 185 aa16.53■□□□□ 0.24
TRAF4-205ENST00000444415 FAUP35544 74 aaKnown RBP16.53■□□□□ 0.24
TRAF4-205ENST00000444415 PVRIGQ6DKI7 326 aa16.53■□□□□ 0.24
TRAF4-205ENST00000444415 FAM219AQ8IW50 185 aa16.53■□□□□ 0.24
TRAF4-205ENST00000444415 SGPP2Q8IWX5 399 aa16.53■□□□□ 0.24
TRAF4-205ENST00000444415 Q8N1Y9 231 aa16.53■□□□□ 0.24
TRAF4-205ENST00000444415 SLC35G3Q8N808 338 aa16.53■□□□□ 0.24
TRAF4-205ENST00000444415 DEDD2Q8WXF8 326 aa16.53■□□□□ 0.24
TRAF4-205ENST00000444415 RRNAD1Q96FB5 475 aaKnown RBP16.53■□□□□ 0.24
TRAF4-205ENST00000444415 TGOLN2O43493 480 aa16.52■□□□□ 0.23
TRAF4-205ENST00000444415 C11orf87Q6NUJ2 197 aa16.52■□□□□ 0.23
TRAF4-205ENST00000444415 SCGB3A2Q96PL1 93 aa16.52■□□□□ 0.23
TRAF4-205ENST00000444415 ZNF436Q9C0F3 470 aaPredicted RBP16.52■□□□□ 0.23
TRAF4-205ENST00000444415 C21orf62Q9NYP8 219 aa16.52■□□□□ 0.23
TRAF4-205ENST00000444415 CACNG5Q9UF02 275 aa16.52■□□□□ 0.23
TRAF4-205ENST00000444415 FOLR2P14207 255 aa16.51■□□□□ 0.23
TRAF4-205ENST00000444415 OR1L6Q8NGR2 347 aa16.51■□□□□ 0.23
TRAF4-205ENST00000444415 IL22RA2Q969J5 263 aa16.51■□□□□ 0.23
TRAF4-205ENST00000444415 CYB5BO43169 146 aa16.5■□□□□ 0.23
TRAF4-205ENST00000444415 IFNA17P01571 189 aa16.5■□□□□ 0.23
TRAF4-205ENST00000444415 IGHV3-48P01763 117 aa16.5■□□□□ 0.23
TRAF4-205ENST00000444415 RNASE2P10153 161 aaKnown RBP16.5■□□□□ 0.23
TRAF4-205ENST00000444415 BSXQ3C1V8 233 aa16.5■□□□□ 0.23
TRAF4-205ENST00000444415 CD300EQ496F6 205 aaPredicted RBP16.5■□□□□ 0.23
TRAF4-205ENST00000444415 NMSQ5H8A3 153 aa16.5■□□□□ 0.23
TRAF4-205ENST00000444415 ZNF57Q68EA5 555 aaPredicted RBP16.5■□□□□ 0.23
TRAF4-205ENST00000444415 RNASE11Q8TAA1 199 aaKnown RBP16.5■□□□□ 0.23
TRAF4-205ENST00000444415 MISP3Q96FF7 219 aa16.5■□□□□ 0.23
TRAF4-205ENST00000444415 BSCL2Q96G97 398 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms