RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 FBXL7Q9UJT9 491 aa12.38□□□□□ -0.43
USP39-205ENST00000442708 C13orf42A0A1B0GVH6 325 aa12.37□□□□□ -0.43
USP39-205ENST00000442708 ADAP1O75689 374 aa12.37□□□□□ -0.43
USP39-205ENST00000442708 DUS4LO95620 317 aaKnown RBP12.37□□□□□ -0.43
USP39-205ENST00000442708 IFNA17P01571 189 aa12.37□□□□□ -0.43
USP39-205ENST00000442708 TRBV12-3P01733 135 aa12.37□□□□□ -0.43
USP39-205ENST00000442708 H2AFB2P0C5Z0 115 aa12.37□□□□□ -0.43
USP39-205ENST00000442708 MYCNOSP40205 109 aa12.37□□□□□ -0.43
USP39-205ENST00000442708 FHL3Q13643 280 aa12.37□□□□□ -0.43
USP39-205ENST00000442708 OR2C3Q8N628 320 aa12.37□□□□□ -0.43
USP39-205ENST00000442708 NECAP1Q8NC96 275 aa12.37□□□□□ -0.43
USP39-205ENST00000442708 OR11H1Q8NG94 326 aa12.37□□□□□ -0.43
USP39-205ENST00000442708 OR1N2Q8NGR9 330 aa12.37□□□□□ -0.43
USP39-205ENST00000442708 USMG5Q96IX5 58 aa12.37□□□□□ -0.43
USP39-205ENST00000442708 SEC22CQ9BRL7 303 aa12.37□□□□□ -0.43
USP39-205ENST00000442708 S4R3C0 116 aa12.37□□□□□ -0.43
USP39-205ENST00000442708 IGHV4OR15-8A0A075B7B6 117 aa12.36□□□□□ -0.43
USP39-205ENST00000442708 A0A087WW49 117 aa12.36□□□□□ -0.43
USP39-205ENST00000442708 A0A0G2JLM5 398 aa12.36□□□□□ -0.43
USP39-205ENST00000442708 DUXBA0A1W2PPF3 345 aa12.36□□□□□ -0.43
USP39-205ENST00000442708 ANKRD34BA5PLL1 514 aa12.36□□□□□ -0.43
USP39-205ENST00000442708 FAM223BA6NKX1 122 aa12.36□□□□□ -0.43
USP39-205ENST00000442708 PF4P02776 101 aa12.36□□□□□ -0.43
USP39-205ENST00000442708 HOXB5P09067 269 aa12.36□□□□□ -0.43
USP39-205ENST00000442708 SULT1A3P0DMM9 295 aa12.36□□□□□ -0.43
USP39-205ENST00000442708 SULT1A4P0DMN0 295 aa12.36□□□□□ -0.43
USP39-205ENST00000442708 DEFA4P12838 97 aa12.36□□□□□ -0.43
USP39-205ENST00000442708 SPNP16150 400 aa12.36□□□□□ -0.43
USP39-205ENST00000442708 SMCO1Q147U7 214 aa12.36□□□□□ -0.43
USP39-205ENST00000442708 C15orf32Q32M92 178 aa12.36□□□□□ -0.43
USP39-205ENST00000442708 PDLIM3Q53GG5 364 aaPredicted RBP12.36□□□□□ -0.43
USP39-205ENST00000442708 GGNBP1Q5YKI7 109 aa12.36□□□□□ -0.43
USP39-205ENST00000442708 ZNF343Q6P1L6 599 aa12.36□□□□□ -0.43
USP39-205ENST00000442708 HSD17B13Q7Z5P4 300 aaPredicted RBP12.36□□□□□ -0.43
USP39-205ENST00000442708 FAM223AQ8IWN6 122 aa12.36□□□□□ -0.43
USP39-205ENST00000442708 DUSP18Q8NEJ0 188 aa12.36□□□□□ -0.43
USP39-205ENST00000442708 ENKURQ8TC29 256 aa12.36□□□□□ -0.43
USP39-205ENST00000442708 PLEKHA3Q9HB20 300 aa12.36□□□□□ -0.43
USP39-205ENST00000442708 F11RQ9Y624 299 aaKnown RBP12.36□□□□□ -0.43
USP39-205ENST00000442708 A0A1B0GU03 582 aa12.35□□□□□ -0.43
USP39-205ENST00000442708 MFSD2BA6NFX1 497 aa12.35□□□□□ -0.43
USP39-205ENST00000442708 MPTX1A8MV57 137 aa12.35□□□□□ -0.43
USP39-205ENST00000442708 PITX3O75364 302 aa12.35□□□□□ -0.43
USP39-205ENST00000442708 IGHV3-23P01764 117 aa12.35□□□□□ -0.43
USP39-205ENST00000442708 SPCS3P61009 180 aa12.35□□□□□ -0.43
USP39-205ENST00000442708 ATP5G2Q06055 141 aa12.35□□□□□ -0.43
USP39-205ENST00000442708 EXOSC2Q13868 293 aaKnown RBP12.35□□□□□ -0.43
USP39-205ENST00000442708 WFDC9Q8NEX5 89 aa12.35□□□□□ -0.43
USP39-205ENST00000442708 OR52E5Q8NH55 327 aa12.35□□□□□ -0.43
USP39-205ENST00000442708 MITD1Q8WV92 249 aa12.35□□□□□ -0.43
USP39-205ENST00000442708 INS-IGF2F8WCM5 200 aa12.34□□□□□ -0.43
USP39-205ENST00000442708 DHFRP00374 187 aa12.34□□□□□ -0.43
USP39-205ENST00000442708 HIST1H1BP16401 226 aaKnown RBP12.34□□□□□ -0.43
USP39-205ENST00000442708 SLURP1P55000 103 aa12.34□□□□□ -0.43
USP39-205ENST00000442708 ZNF616Q08AN1 781 aa12.34□□□□□ -0.43
USP39-205ENST00000442708 SLC25A24Q6NUK1 477 aa12.34□□□□□ -0.43
USP39-205ENST00000442708 CCDC140Q96MF4 163 aa12.34□□□□□ -0.43
USP39-205ENST00000442708 PDCD10Q9BUL8 212 aa12.34□□□□□ -0.43
USP39-205ENST00000442708 TMED3Q9Y3Q3 217 aa12.34□□□□□ -0.43
USP39-205ENST00000442708 HSPB1P04792 205 aaKnown RBP12.33□□□□□ -0.44
USP39-205ENST00000442708 HOXA1P49639 335 aaPredicted RBP12.33□□□□□ -0.44
USP39-205ENST00000442708 DEFA1P59665 94 aa12.33□□□□□ -0.44
USP39-205ENST00000442708 DEFA3P59666 94 aa12.33□□□□□ -0.44
USP39-205ENST00000442708 TNFRSF9Q07011 255 aa12.33□□□□□ -0.44
USP39-205ENST00000442708 ZNF114Q8NC26 417 aa12.33□□□□□ -0.44
USP39-205ENST00000442708 OR1P1Q8NH06 330 aa12.33□□□□□ -0.44
USP39-205ENST00000442708 COQ8AQ8NI60 647 aa12.33□□□□□ -0.44
USP39-205ENST00000442708 ZNF431Q8TF32 576 aaPredicted RBP12.33□□□□□ -0.44
USP39-205ENST00000442708 HSPB7Q9UBY9 170 aa12.33□□□□□ -0.44
USP39-205ENST00000442708 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.32□□□□□ -0.44
USP39-205ENST00000442708 IGHV3-21A0A0B4J1V1 117 aa12.32□□□□□ -0.44
USP39-205ENST00000442708 LINC01619G3V211 115 aa12.32□□□□□ -0.44
USP39-205ENST00000442708 K7EIM0 57 aa12.32□□□□□ -0.44
USP39-205ENST00000442708 RNASE2P10153 161 aaKnown RBP12.32□□□□□ -0.44
USP39-205ENST00000442708 SLC25A6P12236 298 aa12.32□□□□□ -0.44
USP39-205ENST00000442708 CD33P20138 364 aa12.32□□□□□ -0.44
USP39-205ENST00000442708 ERHP84090 104 aaKnown RBP12.32□□□□□ -0.44
USP39-205ENST00000442708 BSXQ3C1V8 233 aa12.32□□□□□ -0.44
USP39-205ENST00000442708 OR1S1Q8NH92 325 aa12.32□□□□□ -0.44
USP39-205ENST00000442708 DCUN1D4Q92564 292 aa12.32□□□□□ -0.44
USP39-205ENST00000442708 DLX4Q92988 240 aaPredicted RBP12.32□□□□□ -0.44
USP39-205ENST00000442708 RBKSQ9H477 322 aa12.32□□□□□ -0.44
USP39-205ENST00000442708 PEF1Q9UBV8 284 aaKnown RBP12.32□□□□□ -0.44
USP39-205ENST00000442708 NOTCH3Q9UM47 2321 aa12.31□□□□□ -0.44
USP39-205ENST00000442708 PIGBOS1A0A0B4J2F0 54 aa12.31□□□□□ -0.44
USP39-205ENST00000442708 CEBPZOSA8MTT3 80 aa12.31□□□□□ -0.44
USP39-205ENST00000442708 BMPR1BO00238 502 aa12.31□□□□□ -0.44
USP39-205ENST00000442708 IL5P05113 134 aa12.31□□□□□ -0.44
USP39-205ENST00000442708 OR8U8P0C7N1 319 aa12.31□□□□□ -0.44
USP39-205ENST00000442708 IGLL1P15814 213 aa12.31□□□□□ -0.44
USP39-205ENST00000442708 PVRIGQ6DKI7 326 aa12.31□□□□□ -0.44
USP39-205ENST00000442708 PLET1Q6UQ28 207 aa12.31□□□□□ -0.44
USP39-205ENST00000442708 ZNF502Q8TBZ5 544 aa12.31□□□□□ -0.44
USP39-205ENST00000442708 TMEM170AQ8WVE7 144 aa12.31□□□□□ -0.44
USP39-205ENST00000442708 DPF1Q92782 380 aa12.31□□□□□ -0.44
USP39-205ENST00000442708 MARVELD1Q9BSK0 173 aa12.31□□□□□ -0.44
USP39-205ENST00000442708 NOTCH1P46531 2555 aa12.31□□□□□ -0.44
USP39-205ENST00000442708 PPP5D1E7EU14 171 aa12.3□□□□□ -0.44
USP39-205ENST00000442708 INMT-MINDY4F8WBC2 141 aa12.3□□□□□ -0.44
USP39-205ENST00000442708 G3V4G9 280 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms