RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 NXF5Q9H1B4 397 aaKnown RBP2.35□□□□□ -2.03
LIG4-203ENST00000442234 MAP1LC3AQ9H492 121 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 SCN2AQ99250 2005 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 KIAA1549Q9HCM3 1950 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 KIR2DS5A0A0G2JLQ3 304 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 A0A0G2JNG1 304 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 CRYAAP02489 173 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 ZGLP1P0C6A0 271 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 CT45A6P0DMU7 189 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 CT45A5P0DMU8 189 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 CT45A7P0DMV0 189 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 VDAC1P21796 283 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 ACRV1P26436 265 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 FCER1GP30273 86 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 VDAC2P45880 294 aaPredicted RBP2.35□□□□□ -2.03
LIG4-203ENST00000442234 TAS2R45P59539 299 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 RPL15P61313 204 aaKnown RBP2.35□□□□□ -2.03
LIG4-203ENST00000442234 RAE1P78406 368 aaKnown RBP2.35□□□□□ -2.03
LIG4-203ENST00000442234 ZNF117Q03924 483 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 MGAT2Q10469 447 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 FUT7Q11130 342 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 EIF3IQ13347 325 aaKnown RBP2.35□□□□□ -2.03
LIG4-203ENST00000442234 KIR2DS5Q14953 304 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 NNATQ16517 81 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 PRSS53Q2L4Q9 553 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 CT45A1Q5HYN5 189 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 ACSM6Q6P461 480 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 DNM1P46Q6ZS02 220 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 FAM57BQ71RH2 274 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 UMODL1-AS1Q8N2C9 162 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 C3orf56Q8N813 242 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 CNEP1R1Q8N9A8 125 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 OR1F12Q8NHA8 337 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 CT45A3Q8NHU0 189 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 PMCHL2Q9BQD1 86 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 C1orf43Q9BWL3 253 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 TMEM59Q9BXS4 323 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 MAP1LC3CQ9BXW4 147 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 SPANXA1Q9NS26 97 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 C20orf141Q9NUB4 165 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 CSDC2Q9Y534 153 aaKnown RBP2.35□□□□□ -2.03
LIG4-203ENST00000442234 ANK1P16157 1881 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 SORL1Q92673 2214 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 TRAV5A0A0B4J249 113 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 A0A1W2PS18 150 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 WIPF3A6NGB9 483 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 PRSS29PA6NIE9 313 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 ZNF732B4DXR9 585 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 LEPROTL1O95214 131 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 CXorf1O96002 111 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 MT-ATP8P03928 68 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 CRYBB3P26998 211 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 KIR2DL2P43627 348 aaPredicted RBP2.34□□□□□ -2.03
LIG4-203ENST00000442234 DAP3P51398 398 aaKnown RBP2.34□□□□□ -2.03
LIG4-203ENST00000442234 ZNF121P58317 390 aaPredicted RBP2.34□□□□□ -2.03
LIG4-203ENST00000442234 RHOBP62745 196 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 SUPT4H1P63272 117 aaKnown RBP2.34□□□□□ -2.03
LIG4-203ENST00000442234 HBG1P69891 147 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 HBG2P69892 147 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 Q0VG73 95 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 C3AR1Q16581 482 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 RALGAPA2Q2PPJ7 1873 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 GAGE13Q4V321 117 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 FAM162BQ5T6X4 162 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 TSPO2Q5TGU0 170 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 RASL11AQ6T310 242 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 SLC22A18ASQ8N1D0 253 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.34□□□□□ -2.03
LIG4-203ENST00000442234 NEU4Q8WWR8 484 aaPredicted RBP2.34□□□□□ -2.03
LIG4-203ENST00000442234 LSM10Q969L4 123 aaKnown RBP2.34□□□□□ -2.03
LIG4-203ENST00000442234 SPAG8Q99932 426 aaPredicted RBP2.34□□□□□ -2.03
LIG4-203ENST00000442234 C20orf78Q9BR46 151 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 DMRT3Q9NQL9 472 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 IL36GQ9NZH8 169 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 HEATR1Q9H583 2144 aaKnown RBP2.34□□□□□ -2.03
LIG4-203ENST00000442234 KIAA2026Q5HYC2 2103 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 TSC2P49815 1807 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 A0A087WV48 116 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 TRBV9A0A0B4J1U6 114 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 hADV38S2A0JD32 116 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 KIR2DS3K7RE56 304 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 CHEK1O14757 476 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 FCN3O75636 299 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 HLA-DRB1P01911 266 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 APCSP02743 223 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 CELA2AP08217 269 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 DRD3P35462 400 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 CSN1S1P47710 185 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 WFDC2Q14508 124 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 KIR2DS3Q14952 304 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 POU2AF1Q16633 256 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 WDR38Q5JTN6 314 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 UFSP1Q6NVU6 142 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 PIP4P1Q86T03 277 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 HAPLN4Q86UW8 402 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 RAB42Q8N4Z0 105 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 TTC9CQ8N5M4 171 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 NUP43Q8NFH3 380 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 SLC35A4Q96G79 324 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 C4orf45Q96LM5 186 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms