RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 STX5Q13190 355 aa1.15□□□□□ -2.23
PFDN4-202ENST00000441080 ZNF846Q147U1 533 aa1.15□□□□□ -2.23
PFDN4-202ENST00000441080 CDKL4Q5MAI5 379 aa1.15□□□□□ -2.23
PFDN4-202ENST00000441080 HIST2H3PS2Q5TEC6 136 aa1.15□□□□□ -2.23
PFDN4-202ENST00000441080 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.15□□□□□ -2.23
PFDN4-202ENST00000441080 Q6ZS49 121 aa1.15□□□□□ -2.23
PFDN4-202ENST00000441080 C12orf29Q8N999 325 aa1.15□□□□□ -2.23
PFDN4-202ENST00000441080 ZNF565Q8N9K5 539 aa1.15□□□□□ -2.23
PFDN4-202ENST00000441080 MCFD2Q8NI22 146 aa1.15□□□□□ -2.23
PFDN4-202ENST00000441080 DDI1Q8WTU0 396 aa1.15□□□□□ -2.23
PFDN4-202ENST00000441080 RASSF5Q8WWW0 418 aa1.15□□□□□ -2.23
PFDN4-202ENST00000441080 KLK6Q92876 244 aa1.15□□□□□ -2.23
PFDN4-202ENST00000441080 DERL1Q9BUN8 251 aa1.15□□□□□ -2.23
PFDN4-202ENST00000441080 MRPS26Q9BYN8 205 aaKnown RBP1.15□□□□□ -2.23
PFDN4-202ENST00000441080 OR5AC2Q9NZP5 309 aa1.15□□□□□ -2.23
PFDN4-202ENST00000441080 GLI3P10071 1580 aa1.15□□□□□ -2.23
PFDN4-202ENST00000441080 EEF1E1-BLOC1S5C9J1V9 151 aa1.14□□□□□ -2.23
PFDN4-202ENST00000441080 CLPSP04118 112 aa1.14□□□□□ -2.23
PFDN4-202ENST00000441080 SHBGP04278 402 aa1.14□□□□□ -2.23
PFDN4-202ENST00000441080 CALB1P05937 261 aa1.14□□□□□ -2.23
PFDN4-202ENST00000441080 OR5G3P0C626 314 aa1.14□□□□□ -2.23
PFDN4-202ENST00000441080 CDK10Q15131 360 aa1.14□□□□□ -2.23
PFDN4-202ENST00000441080 LCN15Q6UWW0 184 aa1.14□□□□□ -2.23
PFDN4-202ENST00000441080 LINC00471Q8N535 108 aa1.14□□□□□ -2.23
PFDN4-202ENST00000441080 ARFGEF3Q5TH69 2177 aa1.14□□□□□ -2.23
PFDN4-202ENST00000441080 HIST1H2BOP23527 126 aa1.13□□□□□ -2.23
PFDN4-202ENST00000441080 HIST1H2BBP33778 126 aa1.13□□□□□ -2.23
PFDN4-202ENST00000441080 HIST1H2BDP58876 126 aa1.13□□□□□ -2.23
PFDN4-202ENST00000441080 MAGOHP61326 146 aaKnown RBP1.13□□□□□ -2.23
PFDN4-202ENST00000441080 HIST1H2BCP62807 126 aa1.13□□□□□ -2.23
PFDN4-202ENST00000441080 HIST2H2BEQ16778 126 aa1.13□□□□□ -2.23
PFDN4-202ENST00000441080 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.13□□□□□ -2.23
PFDN4-202ENST00000441080 LPCAT4Q643R3 524 aa1.13□□□□□ -2.23
PFDN4-202ENST00000441080 RPL22L1Q6P5R6 122 aaKnown RBP1.13□□□□□ -2.23
PFDN4-202ENST00000441080 ALKAL1Q6UXT8 129 aa1.13□□□□□ -2.23
PFDN4-202ENST00000441080 IQCF2Q8IXL9 164 aa1.13□□□□□ -2.23
PFDN4-202ENST00000441080 MRPL30Q8TCC3 161 aaKnown RBP1.13□□□□□ -2.23
PFDN4-202ENST00000441080 AQP3Q92482 292 aa1.13□□□□□ -2.23
PFDN4-202ENST00000441080 HIST1H2BHQ93079 126 aa1.13□□□□□ -2.23
PFDN4-202ENST00000441080 HIST1H2BNQ99877 126 aa1.13□□□□□ -2.23
PFDN4-202ENST00000441080 HIST1H2BMQ99879 126 aa1.13□□□□□ -2.23
PFDN4-202ENST00000441080 TRABDQ9H4I3 376 aa1.13□□□□□ -2.23
PFDN4-202ENST00000441080 FUOMA2VDF0 154 aa1.12□□□□□ -2.23
PFDN4-202ENST00000441080 OR5F1O95221 314 aa1.12□□□□□ -2.23
PFDN4-202ENST00000441080 TNNC2P02585 160 aa1.12□□□□□ -2.23
PFDN4-202ENST00000441080 RNASE3P12724 160 aaKnown RBP1.12□□□□□ -2.23
PFDN4-202ENST00000441080 SLC35B4Q969S0 331 aa1.12□□□□□ -2.23
PFDN4-202ENST00000441080 CMTM6Q9NX76 183 aa1.12□□□□□ -2.23
PFDN4-202ENST00000441080 CKLFQ9UBR5 152 aa1.12□□□□□ -2.23
PFDN4-202ENST00000441080 KCNK1O00180 336 aa1.11□□□□□ -2.23
PFDN4-202ENST00000441080 GEMIN2O14893 280 aaKnown RBP1.11□□□□□ -2.23
PFDN4-202ENST00000441080 HTR1AP08908 422 aa1.11□□□□□ -2.23
PFDN4-202ENST00000441080 UBE2IP63279 158 aaKnown RBP1.11□□□□□ -2.23
PFDN4-202ENST00000441080 HBA1P69905 142 aa1.11□□□□□ -2.23
PFDN4-202ENST00000441080 HIST3H3Q16695 136 aa1.11□□□□□ -2.23
PFDN4-202ENST00000441080 SPANXN3Q5MJ09 141 aa1.11□□□□□ -2.23
PFDN4-202ENST00000441080 BPIFA4PQ86YQ2 179 aa1.11□□□□□ -2.23
PFDN4-202ENST00000441080 C1orf158Q8N1D5 194 aa1.11□□□□□ -2.23
PFDN4-202ENST00000441080 SCGB3A1Q96QR1 104 aa1.11□□□□□ -2.23
PFDN4-202ENST00000441080 TECTAO75443 2155 aa1.11□□□□□ -2.23
PFDN4-202ENST00000441080 HEATR5BQ9P2D3 2071 aa1.11□□□□□ -2.23
PFDN4-202ENST00000441080 MAP3K5Q99683 1374 aa1.1□□□□□ -2.23
PFDN4-202ENST00000441080 HEATR5AQ86XA9 2040 aa1.1□□□□□ -2.23
PFDN4-202ENST00000441080 PRB3Q04118 309 aaPredicted RBP1.1□□□□□ -2.23
PFDN4-202ENST00000441080 DEFB115Q30KQ5 88 aa1.1□□□□□ -2.23
PFDN4-202ENST00000441080 TEX36Q5VZQ5 186 aa1.1□□□□□ -2.23
PFDN4-202ENST00000441080 C8orf74Q6P047 294 aa1.1□□□□□ -2.23
PFDN4-202ENST00000441080 LRRC25Q8N386 305 aaPredicted RBP1.1□□□□□ -2.23
PFDN4-202ENST00000441080 GINS4Q9BRT9 223 aa1.1□□□□□ -2.23
PFDN4-202ENST00000441080 GUCA1BQ9UMX6 200 aa1.1□□□□□ -2.23
PFDN4-202ENST00000441080 C22orf24Q9Y442 160 aa1.1□□□□□ -2.23
PFDN4-202ENST00000441080 DLG5Q8TDM6 1919 aa1.1□□□□□ -2.23
PFDN4-202ENST00000441080 TGIF2-C20orf24A0A0A6YYL0 155 aa1.09□□□□□ -2.23
PFDN4-202ENST00000441080 IGKV1-5P01602 117 aa1.09□□□□□ -2.23
PFDN4-202ENST00000441080 HLA-DRB1P01911 266 aa1.09□□□□□ -2.23
PFDN4-202ENST00000441080 HIST1H1EP10412 219 aaKnown RBP1.09□□□□□ -2.23
PFDN4-202ENST00000441080 SPCS3P61009 180 aa1.09□□□□□ -2.23
PFDN4-202ENST00000441080 CCDC122Q5T0U0 273 aa1.09□□□□□ -2.23
PFDN4-202ENST00000441080 Q6ZQT0 140 aa1.09□□□□□ -2.23
PFDN4-202ENST00000441080 ZNF826PQ6ZT77 177 aa1.09□□□□□ -2.23
PFDN4-202ENST00000441080 C20orf196Q8IYI0 205 aa1.09□□□□□ -2.23
PFDN4-202ENST00000441080 FAM19A2Q8N3H0 131 aa1.09□□□□□ -2.23
PFDN4-202ENST00000441080 TMEM86BQ8N661 226 aa1.09□□□□□ -2.23
PFDN4-202ENST00000441080 OR4D11Q8NGI4 311 aa1.09□□□□□ -2.23
PFDN4-202ENST00000441080 OR13C4Q8NGS5 318 aa1.09□□□□□ -2.23
PFDN4-202ENST00000441080 PFN4Q8NHR9 129 aa1.09□□□□□ -2.23
PFDN4-202ENST00000441080 OR52E6Q96RD3 313 aa1.09□□□□□ -2.23
PFDN4-202ENST00000441080 POLEQ07864 2286 aa1.09□□□□□ -2.24
PFDN4-202ENST00000441080 PSMD12O00232 456 aaPredicted RBP1.08□□□□□ -2.24
PFDN4-202ENST00000441080 IFNA5P01569 189 aa1.08□□□□□ -2.24
PFDN4-202ENST00000441080 FKBP2P26885 142 aaKnown RBP1.08□□□□□ -2.24
PFDN4-202ENST00000441080 OR2F1Q13607 317 aa1.08□□□□□ -2.24
PFDN4-202ENST00000441080 DPPA3Q6W0C5 159 aa1.08□□□□□ -2.24
PFDN4-202ENST00000441080 DEFB128Q7Z7B8 93 aa1.08□□□□□ -2.24
PFDN4-202ENST00000441080 CLVS1Q8IUQ0 354 aaPredicted RBP1.08□□□□□ -2.24
PFDN4-202ENST00000441080 OR4C6Q8NH72 309 aa1.08□□□□□ -2.24
PFDN4-202ENST00000441080 SLC50A1Q9BRV3 221 aa1.08□□□□□ -2.24
PFDN4-202ENST00000441080 COMMD5Q9GZQ3 224 aa1.08□□□□□ -2.24
PFDN4-202ENST00000441080 PRTFDC1Q9NRG1 225 aa1.08□□□□□ -2.24
PFDN4-202ENST00000441080 FBXL12Q9NXK8 326 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms