RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 CR1LQ2VPA4 569 aa11.63□□□□□ -0.55
LIMD1-202ENST00000440097 TMEM106BQ9NUM4 274 aa11.63□□□□□ -0.55
LIMD1-202ENST00000440097 PAGE4O60829 102 aa11.63□□□□□ -0.55
LIMD1-202ENST00000440097 APOBEC3AP31941 199 aaPredicted RBP11.63□□□□□ -0.55
LIMD1-202ENST00000440097 TDRG1Q3Y452 100 aa11.63□□□□□ -0.55
LIMD1-202ENST00000440097 PRAMEF5Q5TYX0 476 aa11.63□□□□□ -0.55
LIMD1-202ENST00000440097 TEX36Q5VZQ5 186 aa11.63□□□□□ -0.55
LIMD1-202ENST00000440097 VKORC1L1Q8N0U8 176 aa11.63□□□□□ -0.55
LIMD1-202ENST00000440097 FAM122AQ96E09 287 aa11.63□□□□□ -0.55
LIMD1-202ENST00000440097 S1PR3Q99500 378 aa11.63□□□□□ -0.55
LIMD1-202ENST00000440097 PARD6GQ9BYG4 376 aaPredicted RBP11.63□□□□□ -0.55
LIMD1-202ENST00000440097 IFI27L2Q9H2X8 130 aa11.63□□□□□ -0.55
LIMD1-202ENST00000440097 CTXND1A0A1B0GTU2 59 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 hADV38S2A0JD32 116 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 PROP1O75360 226 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 RAB7AP51149 207 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 RPL31P62899 125 aaKnown RBP11.62□□□□□ -0.55
LIMD1-202ENST00000440097 LCN2P80188 198 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 TOMM20LQ6UXN7 152 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 TCTEX1D1Q8N7M0 179 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 NEIL1Q96FI4 390 aaPredicted RBP11.62□□□□□ -0.55
LIMD1-202ENST00000440097 MANBALQ9NQG1 85 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 ZNF462Q96JM2 2506 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 TMEM178BH3BS89 294 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 NPPCP23582 126 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 RPS16P62249 146 aaKnown RBP11.62□□□□□ -0.55
LIMD1-202ENST00000440097 ARSJQ5FYB0 599 aaPredicted RBP11.62□□□□□ -0.55
LIMD1-202ENST00000440097 CT45A1Q5HYN5 189 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 OR10G9Q8NGN4 311 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 OR10G7Q8NGN6 311 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 CT45A3Q8NHU0 189 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 ZDHHC16Q969W1 377 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 PXMP4Q9Y6I8 212 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 VENTXO95231 258 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 PCP4P48539 62 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 ERVK-16P61578 105 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 BATFQ16520 125 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 LPAR2Q9HBW0 351 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 TIMM9Q9Y5J7 89 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 CSMD2Q7Z408 3487 aa11.62□□□□□ -0.55
LIMD1-202ENST00000440097 SPG11Q96JI7 2443 aa11.61□□□□□ -0.55
LIMD1-202ENST00000440097 SAA2-SAA4A0A096LPE2 208 aa11.61□□□□□ -0.55
LIMD1-202ENST00000440097 FAM90A26D6RGX4 464 aa11.61□□□□□ -0.55
LIMD1-202ENST00000440097 MMP23AO75900 390 aa11.61□□□□□ -0.55
LIMD1-202ENST00000440097 SAA2P0DJI9 122 aaPredicted RBP11.61□□□□□ -0.55
LIMD1-202ENST00000440097 TCF23Q7RTU1 214 aa11.61□□□□□ -0.55
LIMD1-202ENST00000440097 IDI2-AS1Q9NZ38 188 aa11.61□□□□□ -0.55
LIMD1-202ENST00000440097 TANC2Q9HCD6 1990 aa11.61□□□□□ -0.55
LIMD1-202ENST00000440097 GRIFINA4D1Z8 144 aa11.61□□□□□ -0.55
LIMD1-202ENST00000440097 RAB29O14966 203 aa11.61□□□□□ -0.55
LIMD1-202ENST00000440097 ZG16O60844 167 aa11.61□□□□□ -0.55
LIMD1-202ENST00000440097 LINC00614P0C842 121 aa11.61□□□□□ -0.55
LIMD1-202ENST00000440097 CGB3P0DN86 165 aa11.61□□□□□ -0.55
LIMD1-202ENST00000440097 CGB7P0DN87 165 aa11.61□□□□□ -0.55
LIMD1-202ENST00000440097 DEFA4P12838 97 aa11.61□□□□□ -0.55
LIMD1-202ENST00000440097 BRS3P32247 399 aa11.61□□□□□ -0.55
LIMD1-202ENST00000440097 MRPS11P82912 194 aaKnown RBP11.61□□□□□ -0.55
LIMD1-202ENST00000440097 CDSNQ15517 529 aa11.61□□□□□ -0.55
LIMD1-202ENST00000440097 TMEM144Q7Z5S9 345 aa11.61□□□□□ -0.55
LIMD1-202ENST00000440097 CMTM2Q8TAZ6 248 aa11.61□□□□□ -0.55
LIMD1-202ENST00000440097 DTD1Q8TEA8 209 aa11.61□□□□□ -0.55
LIMD1-202ENST00000440097 IMMP2LQ96T52 175 aa11.61□□□□□ -0.55
LIMD1-202ENST00000440097 MIEN1Q9BRT3 115 aa11.61□□□□□ -0.55
LIMD1-202ENST00000440097 HSPB7Q9UBY9 170 aa11.61□□□□□ -0.55
LIMD1-202ENST00000440097 ARFGEF3Q5TH69 2177 aa11.6□□□□□ -0.55
LIMD1-202ENST00000440097 NDUFB3O43676 98 aa11.6□□□□□ -0.55
LIMD1-202ENST00000440097 FFAR4Q5NUL3 377 aa11.6□□□□□ -0.55
LIMD1-202ENST00000440097 Q6ZWC4 215 aa11.6□□□□□ -0.55
LIMD1-202ENST00000440097 MUC15Q8N387 334 aa11.6□□□□□ -0.55
LIMD1-202ENST00000440097 OR4A16Q8NH70 328 aa11.6□□□□□ -0.55
LIMD1-202ENST00000440097 DSCAML1Q8TD84 2053 aa11.6□□□□□ -0.55
LIMD1-202ENST00000440097 IGHV1-69-2A0A0G2JMI3 117 aa11.6□□□□□ -0.55
LIMD1-202ENST00000440097 B9A039 149 aa11.6□□□□□ -0.55
LIMD1-202ENST00000440097 C11orf94C9JXX5 98 aa11.6□□□□□ -0.55
LIMD1-202ENST00000440097 CCL3L1P16619 93 aa11.6□□□□□ -0.55
LIMD1-202ENST00000440097 ADMP35318 185 aa11.6□□□□□ -0.55
LIMD1-202ENST00000440097 LRRC10Q5BKY1 277 aa11.6□□□□□ -0.55
LIMD1-202ENST00000440097 LYPD2Q6UXB3 125 aa11.6□□□□□ -0.55
LIMD1-202ENST00000440097 MRPL52Q86TS9 123 aaKnown RBP11.6□□□□□ -0.55
LIMD1-202ENST00000440097 LINC01551Q86U37 167 aa11.6□□□□□ -0.55
LIMD1-202ENST00000440097 C20orf144Q9BQM9 153 aa11.6□□□□□ -0.55
LIMD1-202ENST00000440097 GAL3ST2Q9H3Q3 398 aa11.6□□□□□ -0.55
LIMD1-202ENST00000440097 ZNRD1Q9P1U0 126 aa11.6□□□□□ -0.55
LIMD1-202ENST00000440097 PAM16Q9Y3D7 125 aa11.6□□□□□ -0.55
LIMD1-202ENST00000440097 VPS13CQ709C8 3753 aa11.6□□□□□ -0.55
LIMD1-202ENST00000440097 ADORA2A-AS1P86434 159 aa11.59□□□□□ -0.55
LIMD1-202ENST00000440097 DMRTA1Q5VZB9 504 aa11.59□□□□□ -0.55
LIMD1-202ENST00000440097 TMEM14EPQ6UXP3 125 aa11.59□□□□□ -0.55
LIMD1-202ENST00000440097 QTRT1Q9BXR0 403 aaKnown RBP11.59□□□□□ -0.55
LIMD1-202ENST00000440097 NCOR1P1Q9H4R4 102 aa11.59□□□□□ -0.55
LIMD1-202ENST00000440097 LINC00312Q9Y6C7 94 aa11.59□□□□□ -0.55
LIMD1-202ENST00000440097 TPTE2P1Q5T6R2 138 aa11.59□□□□□ -0.55
LIMD1-202ENST00000440097 ZNF714Q96N38 554 aa11.59□□□□□ -0.55
LIMD1-202ENST00000440097 CSMD1Q96PZ7 3565 aa11.59□□□□□ -0.55
LIMD1-202ENST00000440097 PGPEP1LA6NFU8 196 aa11.58□□□□□ -0.56
LIMD1-202ENST00000440097 LYNX1G3V0Z9 82 aa11.58□□□□□ -0.56
LIMD1-202ENST00000440097 OR9G9P0C7N8 305 aa11.58□□□□□ -0.56
LIMD1-202ENST00000440097 LYNX1P0DP58 116 aa11.58□□□□□ -0.56
LIMD1-202ENST00000440097 TFF3Q07654 80 aa11.58□□□□□ -0.56
LIMD1-202ENST00000440097 TEX43Q6ZNM6 134 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms