RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 TP53TG3Q9ULZ0 132 aa8.25□□□□□ -1.09
CDC42SE1-202ENST00000439374 hDV102S1A0JD36 115 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 LRRC30A6NM36 301 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 LINC00473A8K010 186 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 C3orf79P0CE67 100 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 USF1P22415 310 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 REG1BP48304 166 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 FXYD7P58549 80 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 CCL8P80075 99 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 GABRA6Q16445 453 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 LYG1Q8N1E2 194 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 OR2T6Q8NHC8 308 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 SARAFQ96BY9 339 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 C19orf67A6NJJ6 358 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 TMEM250H0YL14 139 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 MLNRO43193 412 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 GGCTO75223 188 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 Q6P435 159 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 TGIF2LYQ8IUE0 185 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 RAB37Q96AX2 223 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 OR8B2Q96RD0 313 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 ENY2Q9NPA8 101 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 TMEM242Q9NWH2 141 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 ZNF891A8MT65 544 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 HYPMO75409 117 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 OR9G9P0C7N8 305 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 PRDX2P32119 198 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 SRP14P37108 136 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 ERVK-16P61578 105 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 OR8G5Q8NG78 346 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 H1FXQ92522 213 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 LOXL4Q96JB6 756 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 ZNF331Q9NQX6 463 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 HCFC1P51610 2035 aa8.24□□□□□ -1.09
CDC42SE1-202ENST00000439374 SMG1Q96Q15 3661 aaKnown RBP8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 TRAV17A0A0B4J275 112 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 WNT2P09544 360 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 SELENOVP59797 346 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 SMIM21Q3B7S5 101 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 TIGITQ495A1 244 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 STUMQ69YW2 141 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 MDS2Q8NDY4 140 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 OR2V2Q96R30 315 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 PSMG3Q9BT73 122 aaPredicted RBP8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 TRAV5A0A0B4J249 113 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 RNF212BA8MTL3 300 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 K7EN84 100 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 NUDT3O95989 172 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 PSG1P11464 419 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 IGFBP2P18065 325 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 RANP62826 216 aaKnown RBP8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 RELQ04864 619 aaPredicted RBP8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 MPV17L2Q567V2 206 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 TRAV1-1A0A0B4J248 108 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 HELTA6NFD8 242 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 AHRRA9YTQ3 701 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 M0QZK8 103 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 RPL15P61313 204 aaKnown RBP8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 FAM27E3Q08E93 113 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 SPRNQ5BIV9 151 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 Q6ZR03 302 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 FAM168AQ92567 244 aa8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 MRPS18CQ9Y3D5 142 aaKnown RBP8.23□□□□□ -1.09
CDC42SE1-202ENST00000439374 KIR2DL5BA0A0G2JN68 375 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 KIR2DL5BA0A0G2JPC4 375 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 FAM90A10PA6NDY2 464 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 FAM90A18PA6NE21 464 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 FAM90A16PA6NEW6 464 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 FAM90A20PA6NIJ5 464 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 FAM90A8PA6NJQ4 464 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 FAM90A7PA6NKC0 464 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 FAM90A22PA8MWA6 464 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 FAM90A12PA8MX19 464 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 FAM90A5PA8MXJ8 464 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 FAM90A23PA8MXZ1 464 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 FAM90A15PP0C7V4 464 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 FAM90A13PP0C7W8 464 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 FAM90A14PP0C7W9 464 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 FAM90A24PP0C7X0 464 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 CA7P43166 264 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 KIR2DL2P43627 348 aaPredicted RBP8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 ATP6V1FQ16864 119 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 DUX4L9Q6RFH8 374 aaPredicted RBP8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 ZNF497Q6ZNH5 498 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 WFDC3Q8IUB2 231 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 KIR2DL5AQ8N109 375 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 ZADH2Q8N4Q0 377 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 OR5B3Q8NH48 314 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 ITLN1Q8WWA0 313 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 CCL13Q99616 98 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 CXXC4Q9H2H0 198 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 BET1LQ9NYM9 111 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 OR2T8A6NH00 312 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 IL6RP08887 468 aaPredicted RBP8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 LINC00310P59036 64 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 UTF1Q5T230 341 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 Q8IYB0 196 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 SNRNP40Q96DI7 357 aaKnown RBP8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 PKIBQ9C010 78 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 MALRD1Q5VYJ5 2156 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms