RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 SOD3P08294 240 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 HOXA4Q00056 320 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 HERPUD1Q15011 391 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 ADIPOQQ15848 244 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 PYY3Q5JQD4 70 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 CRIP3Q6Q6R5 217 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 Q8WTZ3 238 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 COQ2Q96H96 371 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 ANKRD11Q6UB99 2663 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 IFITM10A6NMD0 228 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 CD33P20138 364 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 MMD2Q8IY49 270 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 GATCO43716 136 aaKnown RBP9.61□□□□□ -0.87
TRAPPC9-202ENST00000438773 CA7P43166 264 aa9.61□□□□□ -0.87
TRAPPC9-202ENST00000438773 ID3Q02535 119 aa9.61□□□□□ -0.87
TRAPPC9-202ENST00000438773 PAX5Q02548 391 aa9.61□□□□□ -0.87
TRAPPC9-202ENST00000438773 PRR31Q5SQ13 230 aa9.61□□□□□ -0.87
TRAPPC9-202ENST00000438773 WDR86Q86TI4 376 aa9.61□□□□□ -0.87
TRAPPC9-202ENST00000438773 ELOA3CA0A087WX78 387 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC9-202ENST00000438773 USF1P22415 310 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC9-202ENST00000438773 CDKN1AP38936 164 aa9.61□□□□□ -0.87
TRAPPC9-202ENST00000438773 PRB3Q04118 309 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC9-202ENST00000438773 PSG5Q15238 335 aa9.61□□□□□ -0.87
TRAPPC9-202ENST00000438773 PXMP4Q9Y6I8 212 aa9.61□□□□□ -0.87
TRAPPC9-202ENST00000438773 IGKV1D-17A0A075B6S4 117 aa9.61□□□□□ -0.87
TRAPPC9-202ENST00000438773 TRBV6-6A0A0A6YYG2 114 aa9.61□□□□□ -0.87
TRAPPC9-202ENST00000438773 HINT1P49773 126 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC9-202ENST00000438773 LYZP61626 148 aa9.61□□□□□ -0.87
TRAPPC9-202ENST00000438773 UBE2L3P68036 154 aaKnown RBP9.61□□□□□ -0.87
TRAPPC9-202ENST00000438773 PNRC1Q12796 327 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC9-202ENST00000438773 NHLRC2Q8NBF2 726 aa9.61□□□□□ -0.87
TRAPPC9-202ENST00000438773 LYPD6BQ8NI32 183 aa9.61□□□□□ -0.87
TRAPPC9-202ENST00000438773 SSC4DQ8WTU2 575 aa9.61□□□□□ -0.87
TRAPPC9-202ENST00000438773 DKK4Q9UBT3 224 aa9.61□□□□□ -0.87
TRAPPC9-202ENST00000438773 ARHGAP21Q5T5U3 1957 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 SAA2-SAA4A0A096LPE2 208 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 FBLL1A6NHQ2 334 aaKnown RBP9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 SAA2P0DJI9 122 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 PRB4P10163 310 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 OR10J1P30954 320 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 CSN1S1P47710 185 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 OR1B1Q8NGR6 318 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 MPDU1O75352 247 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 PLAUP00749 431 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 ZNF137PP52743 207 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 TMEM183BQ1AE95 376 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 PCSK4Q6UW60 755 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 MED12LQ86YW9 2145 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 OR1L4Q8NGR5 311 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 OR4X1Q8NH49 305 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 OR2T6Q8NHC8 308 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 NEU4Q8WWR8 484 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 NEUROG1Q92886 237 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 IMMP2LQ96T52 175 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 RASL11BQ9BPW5 248 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 IGKV1-6A0A0C4DH72 117 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 IGLV1-44P01699 117 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 GNG4P50150 75 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 CNN1P51911 297 aaKnown RBP9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 FXYD3Q14802 87 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 AARDQ4LEZ3 155 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 MIC13Q5XKP0 118 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 Q6ZS49 121 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 MANBALQ9NQG1 85 aa9.6□□□□□ -0.87
TRAPPC9-202ENST00000438773 GNG7O60262 68 aa9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 DUTP33316 252 aaKnown RBP9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 MEF2BQ02080 365 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 OR4A47Q6IF82 309 aa9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 OR1P1Q8NH06 330 aa9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 MRPL20Q9BYC9 149 aaKnown RBP9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 DMRT1Q9Y5R6 373 aa9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 NUP37Q8NFH4 326 aa9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 OR5AU1Q8NGC0 362 aa9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 OR4D5Q8NGN0 318 aa9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 TIMM9Q9Y5J7 89 aa9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 FRYQ5TBA9 3013 aa9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 CXCL1P09341 107 aa9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 OR1L6Q8NGR2 347 aa9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 OSR1Q8TAX0 266 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 RAB24Q969Q5 203 aa9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 PPP1R14DQ9NXH3 145 aa9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 GOLT1BQ9Y3E0 138 aa9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 PGPEP1LA6NFU8 196 aa9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 LGALS7P47929 136 aa9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 RPL30P62888 115 aaKnown RBP9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 CCL19Q99731 98 aa9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 GINS3Q9BRX5 216 aa9.59□□□□□ -0.87
TRAPPC9-202ENST00000438773 PCP4P48539 62 aa9.58□□□□□ -0.88
TRAPPC9-202ENST00000438773 ATG2AQ2TAZ0 1938 aa9.58□□□□□ -0.88
TRAPPC9-202ENST00000438773 KDF1Q8NAX2 398 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC9-202ENST00000438773 NOL4LQ96MY1 436 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC9-202ENST00000438773 WDR61Q9GZS3 305 aaKnown RBP9.58□□□□□ -0.88
TRAPPC9-202ENST00000438773 TMEM167BQ9NRX6 74 aa9.58□□□□□ -0.88
TRAPPC9-202ENST00000438773 RPUSD1Q9UJJ7 312 aaKnown RBP9.58□□□□□ -0.88
TRAPPC9-202ENST00000438773 FOXI3A8MTJ6 420 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC9-202ENST00000438773 TMEM178BH3BS89 294 aa9.58□□□□□ -0.88
TRAPPC9-202ENST00000438773 REG1AP05451 166 aa9.58□□□□□ -0.88
TRAPPC9-202ENST00000438773 CT45A10P0DMU9 189 aa9.58□□□□□ -0.88
TRAPPC9-202ENST00000438773 HLA-DRB5Q30154 266 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms