RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ZNF785A8K8V0 405 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 CORTO00230 105 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 NDUFS6O75380 124 aaKnown RBP5.57□□□□□ -1.52
CSDE1-205ENST00000438362 MAS1LP35410 378 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 CEACAM3P40198 252 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 EFNB3Q15768 340 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 GBGT1Q8N5D6 347 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 TMEM105Q8N8V8 129 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 C9orf106Q8NAJ2 232 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 ZNF738Q8NE65 137 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 OR52E5Q8NH55 327 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 OSR1Q8TAX0 266 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-205ENST00000438362 FAM222BQ8WU58 562 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 SGK494Q96LW2 274 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 MRPL37Q9BZE1 423 aaKnown RBP5.57□□□□□ -1.52
CSDE1-205ENST00000438362 SPRR3Q9UBC9 169 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 C2orf16Q68DN1 1984 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.57□□□□□ -1.52
CSDE1-205ENST00000438362 LY6G6EA0A0G2JKS1 128 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 PFN1P07737 140 aaKnown RBP5.57□□□□□ -1.52
CSDE1-205ENST00000438362 CD3EP07766 207 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 OR4A8P0C604 315 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 SP9P0CG40 484 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 GATA2P23769 480 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-205ENST00000438362 TIMP3P35625 211 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 PRNTQ86SH4 94 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 C14orf144Q96I85 54 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 RBM14Q96PK6 669 aaKnown RBP5.57□□□□□ -1.52
CSDE1-205ENST00000438362 MBNL3Q9NUK0 354 aaKnown RBP5.57□□□□□ -1.52
CSDE1-205ENST00000438362 U3KQA8 63 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 LEPROTL1O95214 131 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 FAM87AP0C7U9 286 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 FCER1GP30273 86 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 TMEM177Q53S58 311 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 ATOH7Q8N100 152 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 C5orf17Q8NAS9 161 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 PRR7Q8TB68 274 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 FAM122AQ96E09 287 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 DERL1Q9BUN8 251 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 SAA2-SAA4A0A096LPE2 208 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 FTH1P19P0C7X4 201 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 SAA2P0DJI9 122 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-205ENST00000438362 ACTL10Q5JWF8 245 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 Q6ZSR3 168 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 FAM216BQ8N7L0 139 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 CACNG8Q8WXS5 425 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 RAB1CQ92928 201 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 TMEM186Q96B77 213 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 MIEN1Q9BRT3 115 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 SCNM1Q9BWG6 230 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 AKAP6Q13023 2319 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 LINC00473A8K010 186 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 FAM157AC9JC47 383 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 TM4SF5O14894 197 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 PPIHO43447 177 aaKnown RBP5.56□□□□□ -1.52
CSDE1-205ENST00000438362 IGKV1-39P01597 117 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 IGKV1D-39P04432 117 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 CLEC3BP05452 202 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 GZMBP10144 247 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 MMDQ15546 238 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 RNASE7Q9H1E1 156 aaKnown RBP5.56□□□□□ -1.52
CSDE1-205ENST00000438362 CHODLQ9H9P2 273 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 OSTCQ9NRP0 149 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 C15orf62A8K5M9 175 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 SRRM5B3KS81 715 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 UPK2O00526 184 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 REG1AP05451 166 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 RPL11P62913 178 aaKnown RBP5.56□□□□□ -1.52
CSDE1-205ENST00000438362 ZNF726P1Q15940 193 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 TMEM256Q8N2U0 113 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 BEND2Q8NDZ0 799 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 Q8NFD4 153 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 COQ2Q96H96 371 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 PGLYRP4Q96LB8 373 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 CDC42EP3Q9UKI2 254 aa5.56□□□□□ -1.52
CSDE1-205ENST00000438362 NBASA2RRP1 2371 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 IFITM10A6NMD0 228 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 BMPR1BO00238 502 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 DKK1O94907 266 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 LGALS7P47929 136 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 TBR1Q16650 682 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 SSX8Q7RTT4 187 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 OR9G1Q8NH87 305 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 WNT10AQ9GZT5 417 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 NRN1Q9NPD7 142 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 ZNF71Q9NQZ8 489 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-205ENST00000438362 PCDH15Q96QU1 1955 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 USF3Q68DE3 2245 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 TMSB15BA0A087X1C1 80 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 A0A1W2PRD5 423 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 A0A1W2PRE2 83 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 A0A1W2PRF3 423 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 A0A1W2PRM7 423 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-205ENST00000438362 PEX7O00628 323 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 LINC00205P59089 165 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 LINC00305Q7Z4B0 112 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 FAM19A2Q8N3H0 131 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 ZNF664Q8N3J9 261 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 GRAMD2BQ96HH9 432 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms