RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 C22orf15Q8WYQ4 148 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 FRZBQ92765 325 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 PINX1Q96BK5 328 aaKnown RBP7.75□□□□□ -1.17
CUX1-206ENST00000437600 YPEL2Q96QA6 119 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 PARLQ9H300 379 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 JKAMPQ9P055 326 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 TRGV10A0A0A0MS01 117 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 IGHV3-72A0A0B4J1Y9 119 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 TRAV1-1A0A0B4J248 108 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 VSTM5A8MXK1 200 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 E7EQL1 145 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 NDUFS8O00217 210 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 ERVK-16P61578 105 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 MZT1Q08AG7 82 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 FAM210BQ96KR6 192 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 GAFA1Q96PS6 74 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 HIST1H2BLQ99880 126 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 HIPK2Q9H2X6 1198 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 SAP30LQ9HAJ7 183 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 DYNLRB1Q9NP97 96 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 IL19Q9UHD0 177 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 TCF19Q9Y242 345 aa7.75□□□□□ -1.17
CUX1-206ENST00000437600 A0A0U1RQK1 487 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 A0A1W2PPV4 95 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 C17orf100A8MU93 164 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 ZNF705GA8MUZ8 300 aaPredicted RBP7.74□□□□□ -1.17
CUX1-206ENST00000437600 A8MWP6 167 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 E7EUB6 86 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 ITGB1BP1O14713 200 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 NDUFB4O95168 129 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 CGB3P0DN86 165 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 CGB7P0DN87 165 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 TNFSF4P23510 183 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 PSMB3P49720 205 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 PDLIM3Q53GG5 364 aaPredicted RBP7.74□□□□□ -1.17
CUX1-206ENST00000437600 SLC35E3Q7Z769 313 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 JPT1Q9UK76 154 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 PTPN13Q12923 2485 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 C11orf94C9JXX5 98 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 WNT2P09544 360 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 CDC34P49427 236 aaPredicted RBP7.74□□□□□ -1.17
CUX1-206ENST00000437600 TMEM241Q24JQ0 296 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 C16orf82Q7Z2V1 217 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 ZNF114Q8NC26 417 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 C1orf159Q96HA4 380 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 MGST2Q99735 147 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 NDUFAF3Q9BU61 184 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 ACTR3CQ9C0K3 210 aaPredicted RBP7.74□□□□□ -1.17
CUX1-206ENST00000437600 SMDT1Q9H4I9 107 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 DSCAML1Q8TD84 2053 aa7.74□□□□□ -1.17
CUX1-206ENST00000437600 A0A1W2PPQ1 181 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 SHISA9B4DS77 424 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 SIAH2O43255 324 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 CA2P00918 260 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 NPSP0C0P6 89 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 LINC00614P0C842 121 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 PRB4P10163 310 aaPredicted RBP7.73□□□□□ -1.17
CUX1-206ENST00000437600 IRF2P14316 349 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 RPL31P62899 125 aaKnown RBP7.73□□□□□ -1.17
CUX1-206ENST00000437600 ARSJQ5FYB0 599 aaPredicted RBP7.73□□□□□ -1.17
CUX1-206ENST00000437600 Q5PR19 223 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 DPPA3Q6W0C5 159 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 C1orf174Q8IYL3 243 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 ZNF664Q8N3J9 261 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 CTXND1A0A1B0GTU2 59 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 CLDN34H7C241 214 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 CT45A6P0DMU7 189 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 CT45A5P0DMU8 189 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 CT45A7P0DMV0 189 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 LGALS4P56470 323 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 RPL23P62829 140 aaKnown RBP7.73□□□□□ -1.17
CUX1-206ENST00000437600 C10orf55Q5SWW7 151 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 NUP37Q8NFH4 326 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 OR5R1Q8NH85 324 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 CIB3Q96Q77 187 aaPredicted RBP7.73□□□□□ -1.17
CUX1-206ENST00000437600 PCGF1Q9BSM1 259 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 F2RL2O00254 374 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 DLEU1O43261 78 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 ARL14EPLP0DKL9 152 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 IGFBP2P18065 325 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 VDAC2P45880 294 aaPredicted RBP7.73□□□□□ -1.17
CUX1-206ENST00000437600 GNB2P62879 340 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 BSXQ3C1V8 233 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 DNLZQ5SXM8 178 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 STUMQ69YW2 141 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 FAM216AQ8WUB2 273 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 WFDC12Q8WWY7 111 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 RITA1Q96K30 269 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 SLC25A10Q9UBX3 287 aaPredicted RBP7.73□□□□□ -1.17
CUX1-206ENST00000437600 PXMP4Q9Y6I8 212 aa7.73□□□□□ -1.17
CUX1-206ENST00000437600 J3KRW8 73 aa7.72□□□□□ -1.17
CUX1-206ENST00000437600 GZMBP10144 247 aa7.72□□□□□ -1.17
CUX1-206ENST00000437600 CFHR2P36980 270 aa7.72□□□□□ -1.17
CUX1-206ENST00000437600 ZNF788Q6ZQV5 615 aa7.72□□□□□ -1.17
CUX1-206ENST00000437600 C19orf35Q6ZS72 473 aa7.72□□□□□ -1.17
CUX1-206ENST00000437600 OR13D1Q8NGV5 346 aa7.72□□□□□ -1.17
CUX1-206ENST00000437600 TMEM37Q8WXS4 190 aa7.72□□□□□ -1.17
CUX1-206ENST00000437600 DDB2Q92466 427 aa7.72□□□□□ -1.17
CUX1-206ENST00000437600 TNFRSF14Q92956 283 aa7.72□□□□□ -1.17
CUX1-206ENST00000437600 RNASE6Q93091 150 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms