RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 AIPO00170 330 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 KPNA4O00629 521 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 BANF1O75531 89 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 LY6HO94772 140 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 IGKV1-5P01602 117 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 PRM2P04554 102 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 CRHBPP24387 322 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 SRIP30626 198 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 G6PCP35575 357 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 RPL27AP46776 148 aaKnown RBP1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 CSN1S1P47710 185 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 ZNF80P51504 273 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 PIGPP57054 158 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 KRTAP10-10P60014 251 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 CCL20P78556 96 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 DHRS2Q13268 280 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 LTC4SQ16873 150 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 FAM229BQ4G0N7 80 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 AADACL3Q5VUY0 350 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 SAMD13Q5VXD3 122 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 ZNF322Q6U7Q0 402 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 SDIM1Q6ZPB5 146 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 Q6ZQT7 251 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 LYZL2Q7Z4W2 148 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 DHFR2Q86XF0 187 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 RPRMLQ8N4K4 120 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 CNEP1R1Q8N9A8 125 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 BPIFB6Q8NFQ5 453 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 OR10D4PQ8NGN7 298 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 OR5J2Q8NH18 312 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 SKA2Q8WVK7 121 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 EFCAB11Q9BUY7 163 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 IL36BQ9NZH7 164 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 FUT9Q9Y231 359 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 ERGIC3Q9Y282 383 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 NEO1Q92859 1461 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 XIRP1Q702N8 1843 aaKnown RBP1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 COL18A1P39060 1754 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 ZCCHC11Q5TAX3 1644 aaKnown RBP1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 MDFIC2A0A1B0GVS7 189 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 DHRS12A0PJE2 317 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 RIIAD1A6NNX1 92 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 C17orf51A8MQB3 221 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 E7EQ34 232 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 TRAPPC2LH3BP13 241 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 LEPROTO15243 131 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 OR2J2O76002 312 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 NDUFB2O95178 105 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 SOD1P00441 154 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 IFNA7P01567 189 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 IGHV1-69P01742 117 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 IGHV3-53P01767 116 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 PPBPP02775 128 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 RPS4Y1P22090 263 aaKnown RBP1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 HIST1H2BOP23527 126 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 HIST1H2BBP33778 126 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 CA5AP35218 305 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 FOXA1P55317 472 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 RBM11P57052 281 aaKnown RBP1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 HIST1H2BDP58876 126 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 TAS2R30P59541 319 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 HIST1H2BCP62807 126 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 PSPHP78330 225 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 FLI1Q01543 452 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 HIST2H2BEQ16778 126 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 LGALSLQ3ZCW2 172 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 RPL22L1Q6P5R6 122 aaKnown RBP1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 SPINT4Q6UDR6 99 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 TOMM20LQ6UXN7 152 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 OR5C1Q8NGR4 320 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 OR13C4Q8NGS5 318 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 MUC7Q8TAX7 377 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 HIST1H2BHQ93079 126 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 BORCS5Q969J3 196 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 PLEKHB2Q96CS7 222 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 MALSU1Q96EH3 234 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 HIST1H2BNQ99877 126 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 HIST1H2BMQ99879 126 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 TM2D3Q9BRN9 247 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 TMEM70Q9BUB7 260 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 DERL1Q9BUN8 251 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 PBOV1Q9GZY1 135 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 MED11Q9P086 117 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 GSKIPQ9P0R6 139 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 MARCOQ9UEW3 520 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 MCTS1Q9ULC4 181 aaKnown RBP1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 ASB4Q9Y574 426 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 PTPRJQ12913 1337 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 CEP152O94986 1710 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 GREB1Q4ZG55 1949 aa1.6□□□□□ -2.15
HMGB1P9-201ENST00000429856 ECM29Q5VYK3 1845 aa1.59□□□□□ -2.15
HMGB1P9-201ENST00000429856 NUP160Q12769 1436 aa1.59□□□□□ -2.15
HMGB1P9-201ENST00000429856 NUP210LQ5VU65 1888 aa1.59□□□□□ -2.15
HMGB1P9-201ENST00000429856 IGHV3-73A0A0B4J1V6 119 aa1.59□□□□□ -2.15
HMGB1P9-201ENST00000429856 LOC102725191A0A1B0GVB3 256 aa1.59□□□□□ -2.15
HMGB1P9-201ENST00000429856 GGT3PA6NGU5 568 aa1.59□□□□□ -2.15
HMGB1P9-201ENST00000429856 C17orf98A8MV24 154 aa1.59□□□□□ -2.15
HMGB1P9-201ENST00000429856 BUB1B-PAK6H3BSN5 160 aa1.59□□□□□ -2.15
HMGB1P9-201ENST00000429856 J3QRK9 145 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms