RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 TMEM56Q96MV1 263 aa13.82□□□□□ -0.2
PSPC1-202ENST00000427943 FAM110AQ9BQ89 295 aa13.82□□□□□ -0.2
PSPC1-202ENST00000427943 ZNF436Q9C0F3 470 aaPredicted RBP13.82□□□□□ -0.2
PSPC1-202ENST00000427943 FKBP11Q9NYL4 201 aa13.82□□□□□ -0.2
PSPC1-202ENST00000427943 RBMY1BA6NDE4 496 aaKnown RBP13.81□□□□□ -0.2
PSPC1-202ENST00000427943 RBMY1EA6NEQ0 496 aaKnown RBP13.81□□□□□ -0.2
PSPC1-202ENST00000427943 K7EIM0 57 aa13.81□□□□□ -0.2
PSPC1-202ENST00000427943 RBMY1DP0C7P1 496 aaKnown RBP13.81□□□□□ -0.2
PSPC1-202ENST00000427943 IZUMO4Q1ZYL8 232 aa13.81□□□□□ -0.2
PSPC1-202ENST00000427943 GPR141Q7Z602 305 aa13.81□□□□□ -0.2
PSPC1-202ENST00000427943 SCARB1Q8WTV0 552 aa13.81□□□□□ -0.2
PSPC1-202ENST00000427943 TMEM190Q8WZ59 177 aa13.81□□□□□ -0.2
PSPC1-202ENST00000427943 BSCL2Q96G97 398 aaPredicted RBP13.81□□□□□ -0.2
PSPC1-202ENST00000427943 ABHD1Q96SE0 405 aa13.81□□□□□ -0.2
PSPC1-202ENST00000427943 MIXL1Q9H2W2 232 aa13.81□□□□□ -0.2
PSPC1-202ENST00000427943 C21orf62Q9NYP8 219 aa13.81□□□□□ -0.2
PSPC1-202ENST00000427943 UFC1Q9Y3C8 167 aa13.81□□□□□ -0.2
PSPC1-202ENST00000427943 IGHV3OR16-8A0A075B7F1 116 aa13.8□□□□□ -0.2
PSPC1-202ENST00000427943 F8W735 103 aaPredicted RBP13.8□□□□□ -0.2
PSPC1-202ENST00000427943 ALDH3B2P48448 385 aa13.8□□□□□ -0.2
PSPC1-202ENST00000427943 SPCS2Q15005 226 aa13.8□□□□□ -0.2
PSPC1-202ENST00000427943 Q56UQ5 140 aa13.8□□□□□ -0.2
PSPC1-202ENST00000427943 SLC16A13Q7RTY0 426 aa13.8□□□□□ -0.2
PSPC1-202ENST00000427943 LHFPL1Q86WI0 220 aa13.8□□□□□ -0.2
PSPC1-202ENST00000427943 OR4D10Q8NGI6 311 aa13.8□□□□□ -0.2
PSPC1-202ENST00000427943 OR52B4Q8NGK2 314 aa13.8□□□□□ -0.2
PSPC1-202ENST00000427943 OR4A16Q8NH70 328 aa13.8□□□□□ -0.2
PSPC1-202ENST00000427943 MARC2Q969Z3 335 aa13.8□□□□□ -0.2
PSPC1-202ENST00000427943 CHRDL1Q9BU40 450 aa13.8□□□□□ -0.2
PSPC1-202ENST00000427943 HIPK2Q9H2X6 1198 aa13.8□□□□□ -0.2
PSPC1-202ENST00000427943 MTFP1Q9UDX5 166 aa13.8□□□□□ -0.2
PSPC1-202ENST00000427943 RGS5O15539 181 aa13.79□□□□□ -0.2
PSPC1-202ENST00000427943 C8orf88P0DMB2 117 aa13.79□□□□□ -0.2
PSPC1-202ENST00000427943 ELLP55199 621 aaPredicted RBP13.79□□□□□ -0.2
PSPC1-202ENST00000427943 PIGPP57054 158 aa13.79□□□□□ -0.2
PSPC1-202ENST00000427943 RND3P61587 244 aa13.79□□□□□ -0.2
PSPC1-202ENST00000427943 SPINK9Q5DT21 86 aa13.79□□□□□ -0.2
PSPC1-202ENST00000427943 ARRDC1Q8N5I2 433 aa13.79□□□□□ -0.2
PSPC1-202ENST00000427943 MISP3Q96FF7 219 aa13.79□□□□□ -0.2
PSPC1-202ENST00000427943 TP53RKQ96S44 253 aa13.79□□□□□ -0.2
PSPC1-202ENST00000427943 MRPL27Q9P0M9 148 aaKnown RBP13.79□□□□□ -0.2
PSPC1-202ENST00000427943 ZNF207O43670 478 aaKnown RBP13.78□□□□□ -0.2
PSPC1-202ENST00000427943 ADMP35318 185 aa13.78□□□□□ -0.2
PSPC1-202ENST00000427943 PRCDQ00LT1 54 aa13.78□□□□□ -0.2
PSPC1-202ENST00000427943 SCGB2B2Q4G0G5 96 aa13.78□□□□□ -0.2
PSPC1-202ENST00000427943 SPSB3Q6PJ21 355 aa13.78□□□□□ -0.2
PSPC1-202ENST00000427943 RBPMS2Q6ZRY4 209 aaKnown RBP13.78□□□□□ -0.2
PSPC1-202ENST00000427943 OR2C3Q8N628 320 aa13.78□□□□□ -0.2
PSPC1-202ENST00000427943 OR1L6Q8NGR2 347 aa13.78□□□□□ -0.2
PSPC1-202ENST00000427943 OR1P1Q8NH06 330 aa13.78□□□□□ -0.2
PSPC1-202ENST00000427943 ZNF486Q96H40 463 aaPredicted RBP13.78□□□□□ -0.2
PSPC1-202ENST00000427943 C20orf24Q9BUV8 137 aa13.78□□□□□ -0.2
PSPC1-202ENST00000427943 NDUFA4O00483 81 aa13.77□□□□□ -0.21
PSPC1-202ENST00000427943 CTDSP2O14595 271 aa13.77□□□□□ -0.21
PSPC1-202ENST00000427943 IGKV1-5P01602 117 aa13.77□□□□□ -0.21
PSPC1-202ENST00000427943 TBPP20226 339 aa13.77□□□□□ -0.21
PSPC1-202ENST00000427943 AKR1C2P52895 323 aa13.77□□□□□ -0.21
PSPC1-202ENST00000427943 FAAP20Q6NZ36 180 aa13.77□□□□□ -0.21
PSPC1-202ENST00000427943 CSMD3Q7Z407 3707 aa13.77□□□□□ -0.21
PSPC1-202ENST00000427943 CLVS1Q8IUQ0 354 aaPredicted RBP13.77□□□□□ -0.21
PSPC1-202ENST00000427943 TMEM229BQ8NBD8 167 aa13.77□□□□□ -0.21
PSPC1-202ENST00000427943 DAZ1Q9NQZ3 744 aaKnown RBP13.77□□□□□ -0.21
PSPC1-202ENST00000427943 GAR1Q9NY12 217 aaKnown RBP13.77□□□□□ -0.21
PSPC1-202ENST00000427943 TRAV25A0A0B4J276 109 aa13.76□□□□□ -0.21
PSPC1-202ENST00000427943 RAB3DO95716 219 aa13.76□□□□□ -0.21
PSPC1-202ENST00000427943 IGHV3-48P01763 117 aa13.76□□□□□ -0.21
PSPC1-202ENST00000427943 CD74P04233 296 aa13.76□□□□□ -0.21
PSPC1-202ENST00000427943 TAS2R19P59542 299 aa13.76□□□□□ -0.21
PSPC1-202ENST00000427943 SP6Q3SY56 376 aa13.76□□□□□ -0.21
PSPC1-202ENST00000427943 OR13C8Q8NGS7 320 aa13.76□□□□□ -0.21
PSPC1-202ENST00000427943 MARCH1Q8TCQ1 289 aa13.76□□□□□ -0.21
PSPC1-202ENST00000427943 C15orf40Q8WUR7 153 aa13.76□□□□□ -0.21
PSPC1-202ENST00000427943 ATP6V0BQ99437 205 aa13.76□□□□□ -0.21
PSPC1-202ENST00000427943 C3orf85A0A1B0GTC6 90 aa13.75□□□□□ -0.21
PSPC1-202ENST00000427943 GABARAPH6UMI1 98 aa13.75□□□□□ -0.21
PSPC1-202ENST00000427943 I3L2K1 104 aa13.75□□□□□ -0.21
PSPC1-202ENST00000427943 HSPE1P61604 102 aaKnown RBP13.75□□□□□ -0.21
PSPC1-202ENST00000427943 TRIM16LQ309B1 348 aa13.75□□□□□ -0.21
PSPC1-202ENST00000427943 ANKRD55Q3KP44 614 aa13.75□□□□□ -0.21
PSPC1-202ENST00000427943 STEAP1BQ6NZ63 245 aa13.75□□□□□ -0.21
PSPC1-202ENST00000427943 ZNF114Q8NC26 417 aa13.75□□□□□ -0.21
PSPC1-202ENST00000427943 PINX1Q96BK5 328 aaKnown RBP13.75□□□□□ -0.21
PSPC1-202ENST00000427943 ZNF414Q96IQ9 312 aa13.75□□□□□ -0.21
PSPC1-202ENST00000427943 COPZ2Q9P299 210 aa13.75□□□□□ -0.21
PSPC1-202ENST00000427943 TENM2Q9NT68 2774 aa13.74□□□□□ -0.21
PSPC1-202ENST00000427943 MT-CO2P00403 227 aa13.74□□□□□ -0.21
PSPC1-202ENST00000427943 CTSGP08311 255 aa13.74□□□□□ -0.21
PSPC1-202ENST00000427943 P0C879 139 aa13.74□□□□□ -0.21
PSPC1-202ENST00000427943 SLC35G3Q8N808 338 aa13.74□□□□□ -0.21
PSPC1-202ENST00000427943 CCDC71LQ8N9Z2 235 aa13.74□□□□□ -0.21
PSPC1-202ENST00000427943 TERB2Q8NHR7 220 aa13.74□□□□□ -0.21
PSPC1-202ENST00000427943 ZFAND1Q8TCF1 268 aa13.74□□□□□ -0.21
PSPC1-202ENST00000427943 C5orf66Q9H5L9 145 aa13.74□□□□□ -0.21
PSPC1-202ENST00000427943 UBQLN2Q9UHD9 624 aa13.74□□□□□ -0.21
PSPC1-202ENST00000427943 NUPL2O15504 423 aaKnown RBP13.73□□□□□ -0.21
PSPC1-202ENST00000427943 ST8SIA3O43173 380 aa13.73□□□□□ -0.21
PSPC1-202ENST00000427943 MFAP4P55083 255 aa13.73□□□□□ -0.21
PSPC1-202ENST00000427943 ERHP84090 104 aaKnown RBP13.73□□□□□ -0.21
PSPC1-202ENST00000427943 SPAG8Q99932 426 aaPredicted RBP13.73□□□□□ -0.21
PSPC1-202ENST00000427943 GGTLC1Q9BX51 225 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms