RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 MORN5Q5VZ52 161 aa11.77□□□□□ -0.52
ERCC3-202ENST00000426778 MBNL2Q5VZF2 373 aaKnown RBP11.77□□□□□ -0.52
ERCC3-202ENST00000426778 ST6GALNAC3Q8NDV1 305 aa11.77□□□□□ -0.52
ERCC3-202ENST00000426778 VN1R17PQ8TDU5 208 aa11.77□□□□□ -0.52
ERCC3-202ENST00000426778 SPTA1P02549 2419 aa11.77□□□□□ -0.52
ERCC3-202ENST00000426778 MGST1P10620 155 aaKnown RBP11.77□□□□□ -0.53
ERCC3-202ENST00000426778 CRISP2P16562 243 aa11.77□□□□□ -0.53
ERCC3-202ENST00000426778 HSPE1P61604 102 aaKnown RBP11.77□□□□□ -0.53
ERCC3-202ENST00000426778 PRB3Q04118 309 aaPredicted RBP11.77□□□□□ -0.53
ERCC3-202ENST00000426778 BATFQ16520 125 aa11.77□□□□□ -0.53
ERCC3-202ENST00000426778 MRPL54Q6P161 138 aaKnown RBP11.77□□□□□ -0.53
ERCC3-202ENST00000426778 MMD2Q8IY49 270 aa11.77□□□□□ -0.53
ERCC3-202ENST00000426778 ZCCHC14Q8WYQ9 949 aaKnown RBP11.77□□□□□ -0.53
ERCC3-202ENST00000426778 EAF1Q96JC9 268 aaPredicted RBP11.77□□□□□ -0.53
ERCC3-202ENST00000426778 SLC25A15Q9Y619 301 aa11.77□□□□□ -0.53
ERCC3-202ENST00000426778 A6NNC1 897 aa11.76□□□□□ -0.53
ERCC3-202ENST00000426778 ZNF891A8MT65 544 aaPredicted RBP11.76□□□□□ -0.53
ERCC3-202ENST00000426778 J3QR06 171 aa11.76□□□□□ -0.53
ERCC3-202ENST00000426778 TCAPO15273 167 aa11.76□□□□□ -0.53
ERCC3-202ENST00000426778 MPDU1O75352 247 aa11.76□□□□□ -0.53
ERCC3-202ENST00000426778 PRB4P10163 310 aaPredicted RBP11.76□□□□□ -0.53
ERCC3-202ENST00000426778 OR10J1P30954 320 aa11.76□□□□□ -0.53
ERCC3-202ENST00000426778 CASP6P55212 293 aa11.76□□□□□ -0.53
ERCC3-202ENST00000426778 SUMO1P63165 101 aaKnown RBP11.76□□□□□ -0.53
ERCC3-202ENST00000426778 ZNF474Q6S9Z5 364 aaPredicted RBP11.76□□□□□ -0.53
ERCC3-202ENST00000426778 SGK494Q96LW2 274 aa11.76□□□□□ -0.53
ERCC3-202ENST00000426778 NABP2Q9BQ15 211 aa11.76□□□□□ -0.53
ERCC3-202ENST00000426778 C2orf88Q9BSF0 95 aa11.76□□□□□ -0.53
ERCC3-202ENST00000426778 SERTAD4Q9NUC0 356 aa11.76□□□□□ -0.53
ERCC3-202ENST00000426778 ABCA4P78363 2273 aa11.76□□□□□ -0.53
ERCC3-202ENST00000426778 CCKARP32238 428 aa11.76□□□□□ -0.53
ERCC3-202ENST00000426778 KLF3P57682 345 aaPredicted RBP11.76□□□□□ -0.53
ERCC3-202ENST00000426778 SSBP2P81877 361 aaPredicted RBP11.76□□□□□ -0.53
ERCC3-202ENST00000426778 SARAFQ96BY9 339 aa11.76□□□□□ -0.53
ERCC3-202ENST00000426778 SSBP3Q9BWW4 388 aaPredicted RBP11.76□□□□□ -0.53
ERCC3-202ENST00000426778 PLSCR4Q9NRQ2 329 aa11.76□□□□□ -0.53
ERCC3-202ENST00000426778 F2RL2O00254 374 aa11.76□□□□□ -0.53
ERCC3-202ENST00000426778 LINC00869P0C866 280 aa11.76□□□□□ -0.53
ERCC3-202ENST00000426778 APELAP0DMC3 54 aa11.76□□□□□ -0.53
ERCC3-202ENST00000426778 CD99P14209 185 aa11.76□□□□□ -0.53
ERCC3-202ENST00000426778 CCL8P80075 99 aa11.76□□□□□ -0.53
ERCC3-202ENST00000426778 ZNF503Q96F45 646 aa11.76□□□□□ -0.53
ERCC3-202ENST00000426778 SAMD10Q9BYL1 202 aa11.76□□□□□ -0.53
ERCC3-202ENST00000426778 IL36BQ9NZH7 164 aa11.76□□□□□ -0.53
ERCC3-202ENST00000426778 E7EUB6 86 aa11.75□□□□□ -0.53
ERCC3-202ENST00000426778 PLAUP00749 431 aa11.75□□□□□ -0.53
ERCC3-202ENST00000426778 OR2T6Q8NHC8 308 aa11.75□□□□□ -0.53
ERCC3-202ENST00000426778 PPP1R35Q8TAP8 253 aa11.75□□□□□ -0.53
ERCC3-202ENST00000426778 GNG4P50150 75 aa11.75□□□□□ -0.53
ERCC3-202ENST00000426778 FAM27E3Q08E93 113 aa11.75□□□□□ -0.53
ERCC3-202ENST00000426778 C10orf55Q5SWW7 151 aa11.75□□□□□ -0.53
ERCC3-202ENST00000426778 UHRF2Q96PU4 802 aa11.75□□□□□ -0.53
ERCC3-202ENST00000426778 PLEKHA3Q9HB20 300 aa11.75□□□□□ -0.53
ERCC3-202ENST00000426778 TMEM14BQ9NUH8 114 aa11.75□□□□□ -0.53
ERCC3-202ENST00000426778 KBTBD11-OT1A0A1B0GTJ5 212 aa11.74□□□□□ -0.53
ERCC3-202ENST00000426778 HELTA6NFD8 242 aa11.74□□□□□ -0.53
ERCC3-202ENST00000426778 GGTLC3B5MD39 225 aa11.74□□□□□ -0.53
ERCC3-202ENST00000426778 TRAT1Q6PIZ9 186 aa11.74□□□□□ -0.53
ERCC3-202ENST00000426778 OR52E5Q8NH55 327 aa11.74□□□□□ -0.53
ERCC3-202ENST00000426778 NAT8BQ9UHF3 227 aa11.74□□□□□ -0.53
ERCC3-202ENST00000426778 LGALS4P56470 323 aa11.74□□□□□ -0.53
ERCC3-202ENST00000426778 TMPRSS3P57727 454 aa11.74□□□□□ -0.53
ERCC3-202ENST00000426778 KRTDAPP60985 99 aa11.74□□□□□ -0.53
ERCC3-202ENST00000426778 DIAPH2-AS1Q14236 149 aa11.74□□□□□ -0.53
ERCC3-202ENST00000426778 AARDQ4LEZ3 155 aa11.74□□□□□ -0.53
ERCC3-202ENST00000426778 RCHY1Q96PM5 261 aa11.74□□□□□ -0.53
ERCC3-202ENST00000426778 PARD6AQ9NPB6 346 aa11.74□□□□□ -0.53
ERCC3-202ENST00000426778 V9GYV3 84 aa11.74□□□□□ -0.53
ERCC3-202ENST00000426778 TRGV10A0A0A0MS01 117 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 TRAV17A0A0B4J275 112 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 CT45A6P0DMU7 189 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 CT45A5P0DMU8 189 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 CT45A7P0DMV0 189 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 CCL3L1P16619 93 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 PMCHP20382 165 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 CHRNB4P30926 498 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 SSTP61278 116 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 RAB31Q13636 194 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 RPEL1Q2QD12 228 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 TMEM106BQ9NUM4 274 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 CUL9Q8IWT3 2517 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 TRAV34A0A0B4J273 112 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 DLX1P56177 255 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 YPEL3P61236 119 aaPredicted RBP11.73□□□□□ -0.53
ERCC3-202ENST00000426778 NUTF2P61970 127 aaKnown RBP11.73□□□□□ -0.53
ERCC3-202ENST00000426778 PRR20EP86478 221 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 PRR20CP86479 221 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 PRR20DP86480 221 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 PRR20BP86481 221 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 PRR20AP86496 221 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 FAM168AQ92567 244 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 GNB4Q9HAV0 340 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 SLC35D1Q9NTN3 355 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 MED13LQ71F56 2210 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 TLN1Q9Y490 2541 aaKnown RBP11.73□□□□□ -0.53
ERCC3-202ENST00000426778 CGB3P0DN86 165 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 CGB7P0DN87 165 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 PYYP10082 97 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 FAM19A2Q8N3H0 131 aa11.73□□□□□ -0.53
ERCC3-202ENST00000426778 C1orf162Q8NEQ5 155 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms