RNA–Protein interactions for RNA: ENST00000421434.5

SCRN1-204, Transcript of secernin 1, humanhuman

TSL 3

Gene SCRN1, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-204ENST00000421434 SSR3Q9UNL2 185 aa6.89□□□□□ -1.31
SCRN1-204ENST00000421434 OR51B2Q9Y5P1 312 aa6.89□□□□□ -1.31
SCRN1-204ENST00000421434 F11RQ9Y624 299 aaKnown RBP6.89□□□□□ -1.31
SCRN1-204ENST00000421434 PCLOQ9Y6V0 5065 aa6.88□□□□□ -1.31
SCRN1-204ENST00000421434 VPS13DQ5THJ4 4388 aa6.88□□□□□ -1.31
SCRN1-204ENST00000421434 MARCH11A6NNE9 402 aa6.88□□□□□ -1.31
SCRN1-204ENST00000421434 C15orf62A8K5M9 175 aa6.88□□□□□ -1.31
SCRN1-204ENST00000421434 CHEK1O14757 476 aa6.88□□□□□ -1.31
SCRN1-204ENST00000421434 PGLYRP1O75594 196 aaPredicted RBP6.88□□□□□ -1.31
SCRN1-204ENST00000421434 IGHV3-48P01763 117 aa6.88□□□□□ -1.31
SCRN1-204ENST00000421434 FGF9P31371 208 aaPredicted RBP6.88□□□□□ -1.31
SCRN1-204ENST00000421434 G6PCP35575 357 aa6.88□□□□□ -1.31
SCRN1-204ENST00000421434 LPAR6P43657 344 aa6.88□□□□□ -1.31
SCRN1-204ENST00000421434 RFX2P48378 723 aa6.88□□□□□ -1.31
SCRN1-204ENST00000421434 ERVK-16P61578 105 aa6.88□□□□□ -1.31
SCRN1-204ENST00000421434 HSD17B13Q7Z5P4 300 aaPredicted RBP6.88□□□□□ -1.31
SCRN1-204ENST00000421434 TMEM116Q8NCL8 245 aa6.88□□□□□ -1.31
SCRN1-204ENST00000421434 TSPAN14Q8NG11 270 aa6.88□□□□□ -1.31
SCRN1-204ENST00000421434 FCAMRQ8WWV6 532 aa6.88□□□□□ -1.31
SCRN1-204ENST00000421434 LSM10Q969L4 123 aaKnown RBP6.88□□□□□ -1.31
SCRN1-204ENST00000421434 SLC25A46Q96AG3 418 aa6.88□□□□□ -1.31
SCRN1-204ENST00000421434 SLC25A38Q96DW6 304 aa6.88□□□□□ -1.31
SCRN1-204ENST00000421434 RNF167Q9H6Y7 350 aa6.88□□□□□ -1.31
SCRN1-204ENST00000421434 ETV7Q9Y603 341 aa6.88□□□□□ -1.31
SCRN1-204ENST00000421434 KIAA1109Q2LD37 5005 aa6.87□□□□□ -1.31
SCRN1-204ENST00000421434 TRAV14DV4A0A0A6YYC5 116 aa6.87□□□□□ -1.31
SCRN1-204ENST00000421434 IGHV7-4-1A0A0J9YVY3 117 aa6.87□□□□□ -1.31
SCRN1-204ENST00000421434 IGLL5B9A064 214 aa6.87□□□□□ -1.31
SCRN1-204ENST00000421434 NUPL2O15504 423 aaKnown RBP6.87□□□□□ -1.31
SCRN1-204ENST00000421434 SNAPC5O75971 98 aa6.87□□□□□ -1.31
SCRN1-204ENST00000421434 CA1P00915 261 aaPredicted RBP6.87□□□□□ -1.31
SCRN1-204ENST00000421434 RLN1P04808 185 aa6.87□□□□□ -1.31
SCRN1-204ENST00000421434 F2RP25116 425 aa6.87□□□□□ -1.31
SCRN1-204ENST00000421434 HERV-K104P61576 105 aa6.87□□□□□ -1.31
SCRN1-204ENST00000421434 UBE2UQ5VVX9 321 aa6.87□□□□□ -1.31
SCRN1-204ENST00000421434 THOC7Q6I9Y2 204 aaKnown RBP6.87□□□□□ -1.31
SCRN1-204ENST00000421434 IZUMO2Q6UXV1 221 aa6.87□□□□□ -1.31
SCRN1-204ENST00000421434 OR5AP2Q8NGF4 316 aa6.87□□□□□ -1.31
SCRN1-204ENST00000421434 C2CD4CQ8TF44 421 aa6.87□□□□□ -1.31
SCRN1-204ENST00000421434 GATAD1Q8WUU5 269 aa6.87□□□□□ -1.31
SCRN1-204ENST00000421434 MISP3Q96FF7 219 aa6.87□□□□□ -1.31
SCRN1-204ENST00000421434 ZNF414Q96IQ9 312 aa6.87□□□□□ -1.31
SCRN1-204ENST00000421434 CMTM3Q96MX0 182 aa6.87□□□□□ -1.31
SCRN1-204ENST00000421434 MFFQ9GZY8 342 aa6.87□□□□□ -1.31
SCRN1-204ENST00000421434 AUNIPQ9H7T9 357 aa6.87□□□□□ -1.31
SCRN1-204ENST00000421434 DIABLOQ9NR28 239 aa6.87□□□□□ -1.31
SCRN1-204ENST00000421434 EHFQ9NZC4 300 aa6.87□□□□□ -1.31
SCRN1-204ENST00000421434 COMMD9Q9P000 198 aa6.87□□□□□ -1.31
SCRN1-204ENST00000421434 IGHV3-66A0A0C4DH42 116 aa6.86□□□□□ -1.31
SCRN1-204ENST00000421434 DBX1A6NMT0 343 aa6.86□□□□□ -1.31
SCRN1-204ENST00000421434 MRPS14O60783 128 aaKnown RBP6.86□□□□□ -1.31
SCRN1-204ENST00000421434 PMP2P02689 132 aa6.86□□□□□ -1.31
SCRN1-204ENST00000421434 FGF2P09038 288 aa6.86□□□□□ -1.31
SCRN1-204ENST00000421434 CMC4P56277 68 aaPredicted RBP6.86□□□□□ -1.31
SCRN1-204ENST00000421434 RPL11P62913 178 aaKnown RBP6.86□□□□□ -1.31
SCRN1-204ENST00000421434 PAFAH1B2P68402 229 aa6.86□□□□□ -1.31
SCRN1-204ENST00000421434 RELQ04864 619 aaPredicted RBP6.86□□□□□ -1.31
SCRN1-204ENST00000421434 LEMD1Q68G75 181 aa6.86□□□□□ -1.31
SCRN1-204ENST00000421434 DHRS11Q6UWP2 260 aa6.86□□□□□ -1.31
SCRN1-204ENST00000421434 SPARTQ8N0X7 666 aa6.86□□□□□ -1.31
SCRN1-204ENST00000421434 LILRB2Q8N423 598 aa6.86□□□□□ -1.31
SCRN1-204ENST00000421434 DGCR14Q96DF8 476 aaKnown RBP6.86□□□□□ -1.31
SCRN1-204ENST00000421434 TMEM56Q96MV1 263 aa6.86□□□□□ -1.31
SCRN1-204ENST00000421434 ATP6V0BQ99437 205 aa6.86□□□□□ -1.31
SCRN1-204ENST00000421434 ZNF2Q9BSG1 426 aaPredicted RBP6.86□□□□□ -1.31
SCRN1-204ENST00000421434 VCX3BQ9H321 246 aa6.86□□□□□ -1.31
SCRN1-204ENST00000421434 IFT46Q9NQC8 304 aa6.86□□□□□ -1.31
SCRN1-204ENST00000421434 HECTD4Q9Y4D8 3996 aa6.85□□□□□ -1.31
SCRN1-204ENST00000421434 A0A0A6YYH2 397 aa6.85□□□□□ -1.31
SCRN1-204ENST00000421434 LOC100506127A0A0U1RQW1 187 aa6.85□□□□□ -1.31
SCRN1-204ENST00000421434 A6NJ64 397 aa6.85□□□□□ -1.31
SCRN1-204ENST00000421434 DNASE2O00115 360 aaPredicted RBP6.85□□□□□ -1.31
SCRN1-204ENST00000421434 XRCC3O43542 346 aa6.85□□□□□ -1.31
SCRN1-204ENST00000421434 APOHP02749 345 aaPredicted RBP6.85□□□□□ -1.31
SCRN1-204ENST00000421434 CBX5P45973 191 aa6.85□□□□□ -1.31
SCRN1-204ENST00000421434 HSPA13P48723 471 aa6.85□□□□□ -1.31
SCRN1-204ENST00000421434 MFAP4P55083 255 aa6.85□□□□□ -1.31
SCRN1-204ENST00000421434 DEFB131AP59861 70 aa6.85□□□□□ -1.31
SCRN1-204ENST00000421434 TMEM187Q14656 261 aa6.85□□□□□ -1.31
SCRN1-204ENST00000421434 PHLDA2Q53GA4 152 aa6.85□□□□□ -1.31
SCRN1-204ENST00000421434 FAM90A2PQ658T7 463 aa6.85□□□□□ -1.31
SCRN1-204ENST00000421434 TCF24Q7RTU0 167 aa6.85□□□□□ -1.31
SCRN1-204ENST00000421434 CMTM1Q8IZ96 169 aa6.85□□□□□ -1.31
SCRN1-204ENST00000421434 OR1P1Q8NH06 330 aa6.85□□□□□ -1.31
SCRN1-204ENST00000421434 ST8SIA2Q92186 375 aa6.85□□□□□ -1.31
SCRN1-204ENST00000421434 BORCS5Q969J3 196 aa6.85□□□□□ -1.31
SCRN1-204ENST00000421434 PINX1Q96BK5 328 aaKnown RBP6.85□□□□□ -1.31
SCRN1-204ENST00000421434 OR10C1Q96KK4 312 aa6.85□□□□□ -1.31
SCRN1-204ENST00000421434 NXF2Q9GZY0 626 aaKnown RBP6.85□□□□□ -1.31
SCRN1-204ENST00000421434 FKBP11Q9NYL4 201 aa6.85□□□□□ -1.31
SCRN1-204ENST00000421434 PRNDQ9UKY0 176 aa6.85□□□□□ -1.31
SCRN1-204ENST00000421434 I3L2K1 104 aa6.84□□□□□ -1.31
SCRN1-204ENST00000421434 ST8SIA3O43173 380 aa6.84□□□□□ -1.31
SCRN1-204ENST00000421434 GNG7O60262 68 aa6.84□□□□□ -1.31
SCRN1-204ENST00000421434 DFFBO76075 338 aa6.84□□□□□ -1.31
SCRN1-204ENST00000421434 MT-CO2P00403 227 aa6.84□□□□□ -1.31
SCRN1-204ENST00000421434 GABARAPL2P60520 117 aa6.84□□□□□ -1.31
SCRN1-204ENST00000421434 TOMM20LQ6UXN7 152 aa6.84□□□□□ -1.31
SCRN1-204ENST00000421434 FAM24BQ8N5W8 94 aa6.84□□□□□ -1.31
SCRN1-204ENST00000421434 MOB3AQ96BX8 217 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms