RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 TMEM17Q86X19 198 aa9.41□□□□□ -0.9
LINC00339-203ENST00000420503 CLVS1Q8IUQ0 354 aaPredicted RBP9.41□□□□□ -0.9
LINC00339-203ENST00000420503 FAM24BQ8N5W8 94 aa9.41□□□□□ -0.9
LINC00339-203ENST00000420503 OR11H2Q8NH07 326 aa9.41□□□□□ -0.9
LINC00339-203ENST00000420503 OR4A5Q8NH83 315 aa9.41□□□□□ -0.9
LINC00339-203ENST00000420503 C11orf45Q8TAV5 145 aa9.41□□□□□ -0.9
LINC00339-203ENST00000420503 VN1R17PQ8TDU5 208 aa9.41□□□□□ -0.9
LINC00339-203ENST00000420503 GALNT14Q96FL9 552 aa9.41□□□□□ -0.9
LINC00339-203ENST00000420503 RARRES2Q99969 163 aa9.41□□□□□ -0.9
LINC00339-203ENST00000420503 BCL7BQ9BQE9 202 aa9.41□□□□□ -0.9
LINC00339-203ENST00000420503 HINT2Q9BX68 163 aa9.41□□□□□ -0.9
LINC00339-203ENST00000420503 COMMD5Q9GZQ3 224 aa9.41□□□□□ -0.9
LINC00339-203ENST00000420503 SLC5A7Q9GZV3 580 aa9.41□□□□□ -0.9
LINC00339-203ENST00000420503 CSTL1Q9H114 145 aa9.41□□□□□ -0.9
LINC00339-203ENST00000420503 RHBDL2Q9NX52 303 aa9.41□□□□□ -0.9
LINC00339-203ENST00000420503 C21orf62Q9NYP8 219 aa9.41□□□□□ -0.9
LINC00339-203ENST00000420503 MEIS3P1A6NDR6 274 aa9.4□□□□□ -0.9
LINC00339-203ENST00000420503 OR4C46A6NHA9 309 aa9.4□□□□□ -0.9
LINC00339-203ENST00000420503 NDUFA4O00483 81 aa9.4□□□□□ -0.9
LINC00339-203ENST00000420503 CHEK1O14757 476 aa9.4□□□□□ -0.9
LINC00339-203ENST00000420503 SERPINE2P07093 398 aa9.4□□□□□ -0.9
LINC00339-203ENST00000420503 TAS2R31P59538 309 aa9.4□□□□□ -0.9
LINC00339-203ENST00000420503 SPCS2Q15005 226 aa9.4□□□□□ -0.9
LINC00339-203ENST00000420503 RBMS2Q15434 407 aaKnown RBP9.4□□□□□ -0.9
LINC00339-203ENST00000420503 POU2AF1Q16633 256 aa9.4□□□□□ -0.9
LINC00339-203ENST00000420503 LILRB2Q8N423 598 aa9.4□□□□□ -0.9
LINC00339-203ENST00000420503 TMEM217Q8N7C4 229 aa9.4□□□□□ -0.9
LINC00339-203ENST00000420503 BEST4Q8NFU0 473 aa9.4□□□□□ -0.9
LINC00339-203ENST00000420503 DMBX1Q8NFW5 382 aa9.4□□□□□ -0.9
LINC00339-203ENST00000420503 RAB2BQ8WUD1 216 aa9.4□□□□□ -0.9
LINC00339-203ENST00000420503 BSCL2Q96G97 398 aaPredicted RBP9.4□□□□□ -0.9
LINC00339-203ENST00000420503 RHPN1-AS1Q9BWJ2 59 aa9.4□□□□□ -0.9
LINC00339-203ENST00000420503 SMPXQ9UHP9 88 aa9.4□□□□□ -0.9
LINC00339-203ENST00000420503 APLNQ9ULZ1 77 aa9.4□□□□□ -0.9
LINC00339-203ENST00000420503 IGHV3-66A0A0C4DH42 116 aa9.39□□□□□ -0.91
LINC00339-203ENST00000420503 IGHV7-4-1A0A0J9YVY3 117 aa9.39□□□□□ -0.91
LINC00339-203ENST00000420503 MPTX1A8MV57 137 aa9.39□□□□□ -0.91
LINC00339-203ENST00000420503 RBFOX2O43251 390 aaKnown RBP eCLIP9.39□□□□□ -0.91
LINC00339-203ENST00000420503 XRCC3O43542 346 aa9.39□□□□□ -0.91
LINC00339-203ENST00000420503 SCGNO76038 276 aa9.39□□□□□ -0.91
LINC00339-203ENST00000420503 HPRT1P00492 218 aa9.39□□□□□ -0.91
LINC00339-203ENST00000420503 APOHP02749 345 aaPredicted RBP9.39□□□□□ -0.91
LINC00339-203ENST00000420503 CTSGP08311 255 aa9.39□□□□□ -0.91
LINC00339-203ENST00000420503 TRAPPC2P0DI81 140 aa9.39□□□□□ -0.91
LINC00339-203ENST00000420503 TRAPPC2BP0DI82 140 aa9.39□□□□□ -0.91
LINC00339-203ENST00000420503 NQO2P16083 231 aa9.39□□□□□ -0.91
LINC00339-203ENST00000420503 ARPC4P59998 168 aa9.39□□□□□ -0.91
LINC00339-203ENST00000420503 Q56UQ5 140 aa9.39□□□□□ -0.91
LINC00339-203ENST00000420503 AADACL3Q5VUY0 350 aa9.39□□□□□ -0.91
LINC00339-203ENST00000420503 LEMD1Q68G75 181 aa9.39□□□□□ -0.91
LINC00339-203ENST00000420503 LAMTOR1Q6IAA8 161 aa9.39□□□□□ -0.91
LINC00339-203ENST00000420503 RBM38Q9H0Z9 239 aaKnown RBP9.39□□□□□ -0.91
LINC00339-203ENST00000420503 F11RQ9Y624 299 aaKnown RBP9.39□□□□□ -0.91
LINC00339-203ENST00000420503 TRAV18A0A075B6X5 111 aa9.38□□□□□ -0.91
LINC00339-203ENST00000420503 IGLL5B9A064 214 aa9.38□□□□□ -0.91
LINC00339-203ENST00000420503 H3BMQ9 156 aa9.38□□□□□ -0.91
LINC00339-203ENST00000420503 CA1P00915 261 aaPredicted RBP9.38□□□□□ -0.91
LINC00339-203ENST00000420503 RLN1P04808 185 aa9.38□□□□□ -0.91
LINC00339-203ENST00000420503 RORCP51449 518 aa9.38□□□□□ -0.91
LINC00339-203ENST00000420503 FAM90A2PQ658T7 463 aa9.38□□□□□ -0.91
LINC00339-203ENST00000420503 HOGA1Q86XE5 327 aa9.38□□□□□ -0.91
LINC00339-203ENST00000420503 SCRT1Q9BWW7 348 aa9.38□□□□□ -0.91
LINC00339-203ENST00000420503 C11orf68Q9H3H3 251 aaKnown RBP9.38□□□□□ -0.91
LINC00339-203ENST00000420503 NDUFA4L2Q9NRX3 87 aa9.38□□□□□ -0.91
LINC00339-203ENST00000420503 A0A0A6YYH2 397 aa9.37□□□□□ -0.91
LINC00339-203ENST00000420503 A0A1B0GVY2 172 aa9.37□□□□□ -0.91
LINC00339-203ENST00000420503 A6NJ64 397 aa9.37□□□□□ -0.91
LINC00339-203ENST00000420503 K7EMT4 169 aa9.37□□□□□ -0.91
LINC00339-203ENST00000420503 NUPL2O15504 423 aaKnown RBP9.37□□□□□ -0.91
LINC00339-203ENST00000420503 GIG44P09565 113 aaPredicted RBP9.37□□□□□ -0.91
LINC00339-203ENST00000420503 RBMY1A1P0DJD3 496 aaKnown RBP9.37□□□□□ -0.91
LINC00339-203ENST00000420503 RBMY1CP0DJD4 496 aa9.37□□□□□ -0.91
LINC00339-203ENST00000420503 G6PCP35575 357 aa9.37□□□□□ -0.91
LINC00339-203ENST00000420503 ARL6IP1Q15041 203 aa9.37□□□□□ -0.91
LINC00339-203ENST00000420503 RBMY1FQ15415 496 aaKnown RBP9.37□□□□□ -0.91
LINC00339-203ENST00000420503 UBE2NLQ5JXB2 153 aa9.37□□□□□ -0.91
LINC00339-203ENST00000420503 Q8NAQ8 132 aa9.37□□□□□ -0.91
LINC00339-203ENST00000420503 TMEM116Q8NCL8 245 aa9.37□□□□□ -0.91
LINC00339-203ENST00000420503 DYNC2LI1Q8TCX1 351 aa9.37□□□□□ -0.91
LINC00339-203ENST00000420503 C2CD4CQ8TF44 421 aa9.37□□□□□ -0.91
LINC00339-203ENST00000420503 GIMAP1Q8WWP7 306 aa9.37□□□□□ -0.91
LINC00339-203ENST00000420503 FCAMRQ8WWV6 532 aa9.37□□□□□ -0.91
LINC00339-203ENST00000420503 CMTM3Q96MX0 182 aa9.37□□□□□ -0.91
LINC00339-203ENST00000420503 SRSF8Q9BRL6 282 aaKnown RBP9.37□□□□□ -0.91
LINC00339-203ENST00000420503 PLEKHA2Q9HB19 425 aa9.37□□□□□ -0.91
LINC00339-203ENST00000420503 THYN1Q9P016 225 aa9.37□□□□□ -0.91
LINC00339-203ENST00000420503 MARCH11A6NNE9 402 aa9.36□□□□□ -0.91
LINC00339-203ENST00000420503 C15orf62A8K5M9 175 aa9.36□□□□□ -0.91
LINC00339-203ENST00000420503 YIF1AO95070 293 aa9.36□□□□□ -0.91
LINC00339-203ENST00000420503 KRASP01116 189 aa9.36□□□□□ -0.91
LINC00339-203ENST00000420503 IFNA4P05014 189 aa9.36□□□□□ -0.91
LINC00339-203ENST00000420503 EIF4EP06730 217 aaKnown RBP9.36□□□□□ -0.91
LINC00339-203ENST00000420503 ZNF182P17025 639 aaPredicted RBP9.36□□□□□ -0.91
LINC00339-203ENST00000420503 GNRHRP30968 328 aa9.36□□□□□ -0.91
LINC00339-203ENST00000420503 LPAR6P43657 344 aa9.36□□□□□ -0.91
LINC00339-203ENST00000420503 CATR1Q13166 79 aa9.36□□□□□ -0.91
LINC00339-203ENST00000420503 MSMO1Q15800 293 aa9.36□□□□□ -0.91
LINC00339-203ENST00000420503 SPSB3Q6PJ21 355 aa9.36□□□□□ -0.91
LINC00339-203ENST00000420503 ZNF767PQ75MW2 155 aa9.36□□□□□ -0.91
LINC00339-203ENST00000420503 SAMD12Q8N8I0 201 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms