RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 RPLP1P05386 114 aaKnown RBP8.03□□□□□ -1.12
CD44-206ENST00000415148 SAA2P0DJI9 122 aaPredicted RBP8.03□□□□□ -1.12
CD44-206ENST00000415148 GATA4P43694 442 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 MRPS11P82912 194 aaKnown RBP8.03□□□□□ -1.12
CD44-206ENST00000415148 WDR73Q6P4I2 378 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 ZNF439Q8NDP4 499 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 RCHY1Q96PM5 261 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 OR2V2Q96R30 315 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 MIEN1Q9BRT3 115 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 LRFN3Q9BTN0 628 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 TECRQ9NZ01 308 aaKnown RBP8.03□□□□□ -1.12
CD44-206ENST00000415148 OR51B2Q9Y5P1 312 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 V9GYV3 84 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 LAMA5O15230 3695 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 ARFGEF3Q5TH69 2177 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 IGHV3OR15-7A0A075B7D8 119 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 GLRXP35754 106 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 CCL11P51671 97 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 PRCDQ00LT1 54 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 PRR31Q5SQ13 230 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 PQLC2Q6ZP29 291 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 MMD2Q8IY49 270 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 FDCSPQ8NFU4 85 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 RBM14Q96PK6 669 aaKnown RBP8.02□□□□□ -1.13
CD44-206ENST00000415148 C20orf144Q9BQM9 153 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 GNB4Q9HAV0 340 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 OSTCQ9NRP0 149 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 GOLT1BQ9Y3E0 138 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 J3QR06 171 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 UPK2O00526 184 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 FCN1O00602 326 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 TM4SF5O14894 197 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 IGFBP2P18065 325 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 GNG4P50150 75 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 KLF3P57682 345 aaPredicted RBP8.02□□□□□ -1.13
CD44-206ENST00000415148 TAS2R45P59539 299 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 FXYD3Q14802 87 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 C2orf83Q53S99 150 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 TIMM23BQ5SRD1 257 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 Q6ZVH6 145 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 MOB3BQ86TA1 216 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 MOGAT3Q86VF5 341 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 OR8I2Q8N0Y5 310 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 LEAP2Q969E1 77 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 NABP2Q9BQ15 211 aa8.02□□□□□ -1.13
CD44-206ENST00000415148 KNTC1P50748 2209 aa8.01□□□□□ -1.13
CD44-206ENST00000415148 GPR179Q6PRD1 2367 aa8.01□□□□□ -1.13
CD44-206ENST00000415148 ZDBF2Q9HCK1 2354 aa8.01□□□□□ -1.13
CD44-206ENST00000415148 IGLV3-9A0A075B6K5 115 aa8.01□□□□□ -1.13
CD44-206ENST00000415148 MBD3L4A6NDZ8 208 aaPredicted RBP8.01□□□□□ -1.13
CD44-206ENST00000415148 MBD3L3A6NE82 208 aaPredicted RBP8.01□□□□□ -1.13
CD44-206ENST00000415148 MBD3L5A6NJ08 208 aaPredicted RBP8.01□□□□□ -1.13
CD44-206ENST00000415148 SNURFLB1AK76 121 aa8.01□□□□□ -1.13
CD44-206ENST00000415148 ACTL6BO94805 426 aa8.01□□□□□ -1.13
CD44-206ENST00000415148 TCL1AP56279 114 aa8.01□□□□□ -1.13
CD44-206ENST00000415148 CX3CL1P78423 397 aa8.01□□□□□ -1.13
CD44-206ENST00000415148 MIR17HGQ75NE6 70 aa8.01□□□□□ -1.13
CD44-206ENST00000415148 BAGE3Q86Y29 109 aa8.01□□□□□ -1.13
CD44-206ENST00000415148 BAGE2Q86Y30 109 aa8.01□□□□□ -1.13
CD44-206ENST00000415148 OR5AU1Q8NGC0 362 aa8.01□□□□□ -1.13
CD44-206ENST00000415148 MBD3L2Q8NHZ7 208 aaPredicted RBP8.01□□□□□ -1.13
CD44-206ENST00000415148 RNF2Q99496 336 aa8.01□□□□□ -1.13
CD44-206ENST00000415148 RNASE7Q9H1E1 156 aaKnown RBP8.01□□□□□ -1.13
CD44-206ENST00000415148 PLEKHA3Q9HB20 300 aa8.01□□□□□ -1.13
CD44-206ENST00000415148 A0A1W2PRE2 83 aa8□□□□□ -1.13
CD44-206ENST00000415148 ISLRO14498 428 aa8□□□□□ -1.13
CD44-206ENST00000415148 OR5G3P0C626 314 aa8□□□□□ -1.13
CD44-206ENST00000415148 KRTDAPP60985 99 aa8□□□□□ -1.13
CD44-206ENST00000415148 PSG5Q15238 335 aa8□□□□□ -1.13
CD44-206ENST00000415148 MSMPQ1L6U9 139 aa8□□□□□ -1.13
CD44-206ENST00000415148 SPRNQ5BIV9 151 aa8□□□□□ -1.13
CD44-206ENST00000415148 OR10J3Q5JRS4 329 aa8□□□□□ -1.13
CD44-206ENST00000415148 DOLPP1Q86YN1 238 aa8□□□□□ -1.13
CD44-206ENST00000415148 OR1L8Q8NGR8 309 aa8□□□□□ -1.13
CD44-206ENST00000415148 RNF7Q9UBF6 113 aa8□□□□□ -1.13
CD44-206ENST00000415148 BDP1A6H8Y1 2624 aa8□□□□□ -1.13
CD44-206ENST00000415148 NKX2-8O15522 239 aa8□□□□□ -1.13
CD44-206ENST00000415148 GATA2P23769 480 aaPredicted RBP8□□□□□ -1.13
CD44-206ENST00000415148 MMDQ15546 238 aa8□□□□□ -1.13
CD44-206ENST00000415148 MAJINQ3KP22 176 aa8□□□□□ -1.13
CD44-206ENST00000415148 TIGITQ495A1 244 aa8□□□□□ -1.13
CD44-206ENST00000415148 CENPWQ5EE01 88 aa8□□□□□ -1.13
CD44-206ENST00000415148 DMRTA1Q5VZB9 504 aa8□□□□□ -1.13
CD44-206ENST00000415148 LYG1Q8N1E2 194 aa8□□□□□ -1.13
CD44-206ENST00000415148 OR5B3Q8NH48 314 aa8□□□□□ -1.13
CD44-206ENST00000415148 ITLN1Q8WWA0 313 aa8□□□□□ -1.13
CD44-206ENST00000415148 CACNG8Q8WXS5 425 aa8□□□□□ -1.13
CD44-206ENST00000415148 VAMP8Q9BV40 100 aa8□□□□□ -1.13
CD44-206ENST00000415148 BET1LQ9NYM9 111 aa8□□□□□ -1.13
CD44-206ENST00000415148 ICE1Q9Y2F5 2266 aa8□□□□□ -1.13
CD44-206ENST00000415148 CADP27708 2225 aa8□□□□□ -1.13
CD44-206ENST00000415148 PCNX2A6NKB5 2137 aa7.99□□□□□ -1.13
CD44-206ENST00000415148 HEATR1Q9H583 2144 aaKnown RBP7.99□□□□□ -1.13
CD44-206ENST00000415148 TEX50A0A1B0GTY4 177 aa7.99□□□□□ -1.13
CD44-206ENST00000415148 INS-IGF2F8WCM5 200 aa7.99□□□□□ -1.13
CD44-206ENST00000415148 STUMQ69YW2 141 aa7.99□□□□□ -1.13
CD44-206ENST00000415148 SLC25A48Q6ZT89 311 aaKnown RBP7.99□□□□□ -1.13
CD44-206ENST00000415148 MRPL32Q9BYC8 188 aaKnown RBP7.99□□□□□ -1.13
CD44-206ENST00000415148 SAMD10Q9BYL1 202 aa7.99□□□□□ -1.13
CD44-206ENST00000415148 M0R1B8 84 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms