RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 OR8B3Q8NGG8 313 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 IMP4Q96G21 291 aaKnown RBP0.81□□□□□ -2.28
ATG4C-204ENST00000414558 ERMAPQ96PL5 475 aaPredicted RBP0.81□□□□□ -2.28
ATG4C-204ENST00000414558 LHFPL6Q9Y693 200 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 GLI3P10071 1580 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 FBN2P35556 2912 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 UNC13AQ9UPW8 1703 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 IGKV3D-7A0A0C4DH55 119 aa0.8□□□□□ -2.28
ATG4C-204ENST00000414558 IGKV3OR2-268A0A0C4DH90 116 aa0.8□□□□□ -2.28
ATG4C-204ENST00000414558 GGT3PA6NGU5 568 aa0.8□□□□□ -2.28
ATG4C-204ENST00000414558 GOLGA6L19H0YKK7 550 aa0.8□□□□□ -2.28
ATG4C-204ENST00000414558 SULT1A1P50225 295 aa0.8□□□□□ -2.28
ATG4C-204ENST00000414558 MYL6P60660 151 aa0.8□□□□□ -2.28
ATG4C-204ENST00000414558 IFITM2Q01629 132 aa0.8□□□□□ -2.28
ATG4C-204ENST00000414558 STX5Q13190 355 aa0.8□□□□□ -2.28
ATG4C-204ENST00000414558 FAM173BQ6P4H8 233 aa0.8□□□□□ -2.28
ATG4C-204ENST00000414558 Q6ZS49 121 aa0.8□□□□□ -2.28
ATG4C-204ENST00000414558 C20orf196Q8IYI0 205 aa0.8□□□□□ -2.28
ATG4C-204ENST00000414558 LRRC25Q8N386 305 aaPredicted RBP0.8□□□□□ -2.28
ATG4C-204ENST00000414558 ZNF565Q8N9K5 539 aa0.8□□□□□ -2.28
ATG4C-204ENST00000414558 MRPL30Q8TCC3 161 aaKnown RBP0.8□□□□□ -2.28
ATG4C-204ENST00000414558 C11orf40Q8WZ69 217 aa0.8□□□□□ -2.28
ATG4C-204ENST00000414558 CHMP6Q96FZ7 201 aa0.8□□□□□ -2.28
ATG4C-204ENST00000414558 PAIP2Q9BPZ3 127 aaKnown RBP0.8□□□□□ -2.28
ATG4C-204ENST00000414558 WDR61Q9GZS3 305 aaKnown RBP0.8□□□□□ -2.28
ATG4C-204ENST00000414558 CISHQ9NSE2 258 aa0.8□□□□□ -2.28
ATG4C-204ENST00000414558 TONSLQ96HA7 1378 aa0.8□□□□□ -2.28
ATG4C-204ENST00000414558 IGKV2-40A0A087WW87 121 aaPredicted RBP0.79□□□□□ -2.28
ATG4C-204ENST00000414558 SDCBPO00560 298 aaPredicted RBP0.79□□□□□ -2.28
ATG4C-204ENST00000414558 IGKV2D-40P01614 121 aaPredicted RBP0.79□□□□□ -2.28
ATG4C-204ENST00000414558 CLPSP04118 112 aa0.79□□□□□ -2.28
ATG4C-204ENST00000414558 IFNA16P05015 189 aa0.79□□□□□ -2.28
ATG4C-204ENST00000414558 SERPINA6P08185 405 aa0.79□□□□□ -2.28
ATG4C-204ENST00000414558 CD79AP11912 226 aa0.79□□□□□ -2.28
ATG4C-204ENST00000414558 RPS4Y1P22090 263 aaKnown RBP0.79□□□□□ -2.28
ATG4C-204ENST00000414558 HIST1H1TP22492 207 aaPredicted RBP0.79□□□□□ -2.28
ATG4C-204ENST00000414558 SPCS3P61009 180 aa0.79□□□□□ -2.28
ATG4C-204ENST00000414558 PSME3P61289 254 aa0.79□□□□□ -2.28
ATG4C-204ENST00000414558 CTAG1AP78358 180 aa0.79□□□□□ -2.28
ATG4C-204ENST00000414558 FADDQ13158 208 aa0.79□□□□□ -2.28
ATG4C-204ENST00000414558 ITGB3BPQ13352 177 aaPredicted RBP0.79□□□□□ -2.28
ATG4C-204ENST00000414558 ZNF345Q14585 488 aa0.79□□□□□ -2.28
ATG4C-204ENST00000414558 HIST2H3PS2Q5TEC6 136 aa0.79□□□□□ -2.28
ATG4C-204ENST00000414558 C8orf74Q6P047 294 aa0.79□□□□□ -2.28
ATG4C-204ENST00000414558 RPL22L1Q6P5R6 122 aaKnown RBP0.79□□□□□ -2.28
ATG4C-204ENST00000414558 OR13C4Q8NGS5 318 aa0.79□□□□□ -2.28
ATG4C-204ENST00000414558 RASSF5Q8WWW0 418 aa0.79□□□□□ -2.28
ATG4C-204ENST00000414558 PPP1R14BQ96C90 147 aa0.79□□□□□ -2.28
ATG4C-204ENST00000414558 DERL1Q9BUN8 251 aa0.79□□□□□ -2.28
ATG4C-204ENST00000414558 YIPF3Q9GZM5 350 aa0.79□□□□□ -2.28
ATG4C-204ENST00000414558 IL20Q9NYY1 176 aa0.79□□□□□ -2.28
ATG4C-204ENST00000414558 BAIAP2Q9UQB8 552 aa0.79□□□□□ -2.28
ATG4C-204ENST00000414558 SOX21Q9Y651 276 aaPredicted RBP0.79□□□□□ -2.28
ATG4C-204ENST00000414558 KIF24Q5T7B8 1368 aa0.79□□□□□ -2.28
ATG4C-204ENST00000414558 BRWD1Q9NSI6 2320 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 PCDH15Q96QU1 1955 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 TMEM210A6NLX4 147 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 PSMD12O00232 456 aaPredicted RBP0.78□□□□□ -2.28
ATG4C-204ENST00000414558 IGKV1-5P01602 117 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 IL9P15248 144 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 HIST1H2BOP23527 126 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 HIST1H2BBP33778 126 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 CDKN2CP42773 168 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 HIST1H2BDP58876 126 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 SNRPD2P62316 118 aaKnown RBP0.78□□□□□ -2.28
ATG4C-204ENST00000414558 HIST1H2BCP62807 126 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 SUPT4H1P63272 117 aaKnown RBP0.78□□□□□ -2.28
ATG4C-204ENST00000414558 HIST2H2BEQ16778 126 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 ACOT6Q3I5F7 207 aaPredicted RBP0.78□□□□□ -2.28
ATG4C-204ENST00000414558 AKIRIN2Q53H80 203 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.78□□□□□ -2.28
ATG4C-204ENST00000414558 AADACL3Q5VUY0 350 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 SPOPLQ6IQ16 392 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 Q8N2B8 174 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 ZNF439Q8NDP4 499 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 OR51D1Q8NGF3 324 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 OR2T4Q8NH00 348 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 MCFD2Q8NI22 146 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 HIST1H2BHQ93079 126 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 HIST1H2BNQ99877 126 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 HIST1H2BMQ99879 126 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 ADAT1Q9BUB4 502 aaKnown RBP0.78□□□□□ -2.28
ATG4C-204ENST00000414558 PARD6GQ9BYG4 376 aaPredicted RBP0.78□□□□□ -2.28
ATG4C-204ENST00000414558 PSTPIP2Q9H939 334 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 PRTFDC1Q9NRG1 225 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 NUP155O75694 1391 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 NCOA1Q15788 1441 aa0.78□□□□□ -2.28
ATG4C-204ENST00000414558 IGKV3-7A0A075B6H7 116 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 PQLC2LA1A4F0 135 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 TMEM114B3SHH9 223 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 CHP2O43745 196 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 RPP14O95059 124 aaKnown RBP0.77□□□□□ -2.29
ATG4C-204ENST00000414558 HLA-DRB1P01911 266 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 TNNC2P02585 160 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 PMP2P02689 132 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 NEFHP12036 1026 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 HOXA6P31267 233 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 OMPP47874 163 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 SPANXN3Q5MJ09 141 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 DEFB128Q7Z7B8 93 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms