RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 SMCPP49901 116 aaPredicted RBP4.31□□□□□ -1.72
HERC4-205ENST00000412272 ZNF157P51786 506 aaPredicted RBP4.31□□□□□ -1.72
HERC4-205ENST00000412272 ZNF415Q09FC8 603 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 ARL16Q0P5N6 197 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 GAGE13Q4V321 117 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 TMEM252Q8N6L7 170 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 FAM110DQ8TAY7 271 aaPredicted RBP4.31□□□□□ -1.72
HERC4-205ENST00000412272 RDH5Q92781 318 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 GNB1LQ9BYB4 327 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 LY96Q9Y6Y9 160 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 TRAV5A0A0B4J249 113 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 NUDT14O95848 222 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 OXTP01178 125 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 IGHMP01871 453 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 BGLAPP02818 100 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 SP9P0CG40 484 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 RPL31P62899 125 aaKnown RBP4.31□□□□□ -1.72
HERC4-205ENST00000412272 TRIP6Q15654 476 aaKnown RBP4.31□□□□□ -1.72
HERC4-205ENST00000412272 PEAR1Q5VY43 1037 aaPredicted RBP4.31□□□□□ -1.72
HERC4-205ENST00000412272 ZNF793Q6ZN11 406 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 SNRNP40Q96DI7 357 aaKnown RBP4.31□□□□□ -1.72
HERC4-205ENST00000412272 TMEM70Q9BUB7 260 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 MRPS17Q9Y2R5 130 aaKnown RBP4.31□□□□□ -1.72
HERC4-205ENST00000412272 TIMM13Q9Y5L4 95 aaPredicted RBP4.31□□□□□ -1.72
HERC4-205ENST00000412272 EXPH5Q8NEV8 1989 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 TMEM202A6NGA9 273 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 CASTOR2A6NHX0 329 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 OOSP1A8MZH6 123 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 MT-ND6P03923 174 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 KIR2DS2P43631 304 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 HERVK_113P63121 156 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 ID3Q02535 119 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 C1orf61Q13536 156 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 LINC00336Q6ZUF6 198 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 TRPT1Q86TN4 253 aaKnown RBP4.31□□□□□ -1.72
HERC4-205ENST00000412272 RAB42Q8N4Z0 105 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 DNAJB12Q9NXW2 375 aaKnown RBP4.31□□□□□ -1.72
HERC4-205ENST00000412272 PKIGQ9Y2B9 76 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 PIGBOS1A0A0B4J2F0 54 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 A0A1B0GTH9 108 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 SNURFLB1AK76 121 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 APOHP02749 345 aaPredicted RBP4.3□□□□□ -1.72
HERC4-205ENST00000412272 ASAH2BP0C7U1 165 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 TMEM50BP56557 158 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 DLX2Q07687 328 aaPredicted RBP4.3□□□□□ -1.72
HERC4-205ENST00000412272 TMEM196Q5HYL7 178 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 ZC2HC1BQ5TFG8 222 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 TSPO2Q5TGU0 170 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 SLC25A47Q6Q0C1 308 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 ZNF740Q8NDX6 193 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 ADAT3Q96EY9 351 aaPredicted RBP4.3□□□□□ -1.72
HERC4-205ENST00000412272 TXNDC17Q9BRA2 123 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 A0A1B0GWB2 263 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 A0A1W2PQU0 124 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 OTOL1A6NHN0 477 aaPredicted RBP4.3□□□□□ -1.72
HERC4-205ENST00000412272 CHST1O43916 411 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 NPPCP23582 126 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 TXNDC8Q6A555 127 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 IL17DQ8TAD2 202 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 ULBP3Q9BZM4 244 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 HCFC1P51610 2035 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 ARID1AO14497 2285 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 LOC107986453A0A1B0GWG9 222 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 A8MZ25 164 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 BMPR1BO00238 502 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 PPP1CAP62136 330 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 ADORA2A-AS1P86434 159 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 KCTD18Q6PI47 426 aaPredicted RBP4.3□□□□□ -1.72
HERC4-205ENST00000412272 SLC37A2Q8TED4 501 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 SSBP3Q9BWW4 388 aaPredicted RBP4.3□□□□□ -1.72
HERC4-205ENST00000412272 FANCMQ8IYD8 2048 aa4.3□□□□□ -1.72
HERC4-205ENST00000412272 A0A0J9YW62 118 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 A0A1B0GVT2 93 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 K7ENP7 123 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 SMIM13P0DJ93 91 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 ZNF20P17024 532 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 AMY2BP19961 511 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 ZNF718Q3SXZ3 478 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 DMRTC1Q5HYR2 192 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 Q6ZQT7 251 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 FAM19A1Q7Z5A9 133 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 HSD11B1LQ7Z5J1 315 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 EXOC3-AS1Q8N2X6 119 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 SCGB1C1Q8TD33 95 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 LMX1AQ8TE12 382 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 VSIRQ9H7M9 311 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 PRKNO60260 465 aaPredicted RBP4.29□□□□□ -1.72
HERC4-205ENST00000412272 H2BFMP0C1H6 154 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 DYNLT3P51808 116 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 HLA-DQA1Q5Y7H0 255 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 TMEM136Q6ZRR5 245 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 Q6ZSR3 168 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 Q6ZT83 130 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 TMEFF1Q8IYR6 380 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 OR2A1Q8NGT9 310 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 FOXA2Q9Y261 457 aaPredicted RBP4.29□□□□□ -1.72
HERC4-205ENST00000412272 KLK5Q9Y337 293 aaPredicted RBP4.29□□□□□ -1.72
HERC4-205ENST00000412272 FAM236AA0A1B0GUQ0 79 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 FAM236BA0A1B0GV22 79 aa4.29□□□□□ -1.72
HERC4-205ENST00000412272 TMEM262E9PQX1 116 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 292.4 ms