RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 CYP2G1PQ6ZSU1 146 aa11.03□□□□□ -0.64
LIMS1-205ENST00000410093 TEX45Q8NA69 505 aa11.03□□□□□ -0.64
LIMS1-205ENST00000410093 RNASEH2CQ8TDP1 164 aaKnown RBP11.03□□□□□ -0.64
LIMS1-205ENST00000410093 TMEM170AQ8WVE7 144 aa11.03□□□□□ -0.64
LIMS1-205ENST00000410093 MGST2Q99735 147 aa11.03□□□□□ -0.64
LIMS1-205ENST00000410093 C20orf24Q9BUV8 137 aa11.03□□□□□ -0.64
LIMS1-205ENST00000410093 UTP20O75691 2785 aaKnown RBP11.02□□□□□ -0.64
LIMS1-205ENST00000410093 NBPF19A0A087WUL8 3843 aa11.02□□□□□ -0.64
LIMS1-205ENST00000410093 SRRM4A7MD48 611 aaKnown RBP11.02□□□□□ -0.65
LIMS1-205ENST00000410093 PLAUP00749 431 aa11.02□□□□□ -0.65
LIMS1-205ENST00000410093 STAG3L2P0CL84 134 aa11.02□□□□□ -0.65
LIMS1-205ENST00000410093 STAG3L3P0CL85 134 aa11.02□□□□□ -0.65
LIMS1-205ENST00000410093 COMPP49747 757 aaPredicted RBP11.02□□□□□ -0.65
LIMS1-205ENST00000410093 CEBPGP53567 150 aa11.02□□□□□ -0.65
LIMS1-205ENST00000410093 CD81P60033 236 aa11.02□□□□□ -0.65
LIMS1-205ENST00000410093 ERVFRD-1P60508 538 aa11.02□□□□□ -0.65
LIMS1-205ENST00000410093 RPS16P62249 146 aaKnown RBP11.02□□□□□ -0.65
LIMS1-205ENST00000410093 TMEM241Q24JQ0 296 aa11.02□□□□□ -0.65
LIMS1-205ENST00000410093 WDR25Q64LD2 544 aaPredicted RBP11.02□□□□□ -0.65
LIMS1-205ENST00000410093 ZNF841Q6ZN19 808 aa11.02□□□□□ -0.65
LIMS1-205ENST00000410093 RNF2Q99496 336 aa11.02□□□□□ -0.65
LIMS1-205ENST00000410093 CLEC7AQ9BXN2 247 aa11.02□□□□□ -0.65
LIMS1-205ENST00000410093 NAV2Q8IVL1 2488 aa11.02□□□□□ -0.65
LIMS1-205ENST00000410093 SIAH2O43255 324 aa11.01□□□□□ -0.65
LIMS1-205ENST00000410093 CLN5O75503 358 aa11.01□□□□□ -0.65
LIMS1-205ENST00000410093 IGLV1-47P01700 117 aa11.01□□□□□ -0.65
LIMS1-205ENST00000410093 B2MP61769 119 aa11.01□□□□□ -0.65
LIMS1-205ENST00000410093 ARSJQ5FYB0 599 aaPredicted RBP11.01□□□□□ -0.65
LIMS1-205ENST00000410093 C11orf42Q8N5U0 333 aa11.01□□□□□ -0.65
LIMS1-205ENST00000410093 LY6G5BQ8NDX9 201 aa11.01□□□□□ -0.65
LIMS1-205ENST00000410093 HINT2Q9BX68 163 aa11.01□□□□□ -0.65
LIMS1-205ENST00000410093 IGHV2-26A0A0B4J1V2 119 aa11□□□□□ -0.65
LIMS1-205ENST00000410093 CLDN34H7C241 214 aa11□□□□□ -0.65
LIMS1-205ENST00000410093 OPN1MWP04001 364 aa11□□□□□ -0.65
LIMS1-205ENST00000410093 LIPFP07098 398 aa11□□□□□ -0.65
LIMS1-205ENST00000410093 OPN1MW2P0DN77 364 aa11□□□□□ -0.65
LIMS1-205ENST00000410093 OPN1MW3P0DN78 364 aa11□□□□□ -0.65
LIMS1-205ENST00000410093 RNASE2P10153 161 aaKnown RBP11□□□□□ -0.65
LIMS1-205ENST00000410093 COL8A2P25067 703 aa11□□□□□ -0.65
LIMS1-205ENST00000410093 RND2P52198 227 aa11□□□□□ -0.65
LIMS1-205ENST00000410093 PRR20EP86478 221 aa11□□□□□ -0.65
LIMS1-205ENST00000410093 PRR20CP86479 221 aa11□□□□□ -0.65
LIMS1-205ENST00000410093 PRR20DP86480 221 aa11□□□□□ -0.65
LIMS1-205ENST00000410093 PRR20BP86481 221 aa11□□□□□ -0.65
LIMS1-205ENST00000410093 PRR20AP86496 221 aa11□□□□□ -0.65
LIMS1-205ENST00000410093 DTX2Q86UW9 622 aa11□□□□□ -0.65
LIMS1-205ENST00000410093 MMD2Q8IY49 270 aa11□□□□□ -0.65
LIMS1-205ENST00000410093 YPEL4Q96NS1 127 aa11□□□□□ -0.65
LIMS1-205ENST00000410093 SMIM7Q9BQ49 75 aa11□□□□□ -0.65
LIMS1-205ENST00000410093 CHODLQ9H9P2 273 aa11□□□□□ -0.65
LIMS1-205ENST00000410093 PPIAL4CA0A0B4J2A2 164 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 M0R1W7 72 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 YIF1AO95070 293 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 FBP1P09467 338 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 PPIAL4GP0DN37 164 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 AKR1C3P42330 323 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 CD69Q07108 199 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 ETFRF1Q6IPR1 90 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 C11orf71Q6IPW1 123 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 STPG3Q8N7X2 389 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 BTF3L4Q96K17 158 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 SSX3Q99909 188 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 SRSF8Q9BRL6 282 aaKnown RBP10.99□□□□□ -0.65
LIMS1-205ENST00000410093 MAST4O15021 2626 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 BUB1B-PAK6H3BSN5 160 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 GOSR1O95249 250 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 IGLV2-23P01705 113 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 GRNP28799 593 aaKnown RBP10.99□□□□□ -0.65
LIMS1-205ENST00000410093 TAS2R45P59539 299 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 SMUG1Q53HV7 270 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 C1orf122Q6ZSJ8 110 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 FAM24BQ8N5W8 94 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 ZNF114Q8NC26 417 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 OR4F5Q8NH21 305 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 ANAPC16Q96DE5 110 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 OR4F4Q96R69 305 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 TMEM167BQ9NRX6 74 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 DOK5Q9P104 306 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 SLC45A2Q9UMX9 530 aa10.99□□□□□ -0.65
LIMS1-205ENST00000410093 C11orf94C9JXX5 98 aa10.98□□□□□ -0.65
LIMS1-205ENST00000410093 CORTO00230 105 aa10.98□□□□□ -0.65
LIMS1-205ENST00000410093 PAGE4O60829 102 aa10.98□□□□□ -0.65
LIMS1-205ENST00000410093 S100A6P06703 90 aa10.98□□□□□ -0.65
LIMS1-205ENST00000410093 CD99P14209 185 aa10.98□□□□□ -0.65
LIMS1-205ENST00000410093 SELENOTP62341 195 aa10.98□□□□□ -0.65
LIMS1-205ENST00000410093 PAX2Q02962 417 aa10.98□□□□□ -0.65
LIMS1-205ENST00000410093 MIC13Q5XKP0 118 aa10.98□□□□□ -0.65
LIMS1-205ENST00000410093 SPNS3Q6ZMD2 512 aa10.98□□□□□ -0.65
LIMS1-205ENST00000410093 MRPL32Q9BYC8 188 aaKnown RBP10.98□□□□□ -0.65
LIMS1-205ENST00000410093 PATZ1Q9HBE1 687 aaKnown RBP10.98□□□□□ -0.65
LIMS1-205ENST00000410093 INSIG2Q9Y5U4 225 aa10.98□□□□□ -0.65
LIMS1-205ENST00000410093 CEACAM3P40198 252 aa10.97□□□□□ -0.65
LIMS1-205ENST00000410093 HABP2Q14520 560 aaPredicted RBP10.97□□□□□ -0.65
LIMS1-205ENST00000410093 PVRIGQ6DKI7 326 aa10.97□□□□□ -0.65
LIMS1-205ENST00000410093 PQLC2Q6ZP29 291 aa10.97□□□□□ -0.65
LIMS1-205ENST00000410093 IQCF2Q8IXL9 164 aa10.97□□□□□ -0.65
LIMS1-205ENST00000410093 OR4P4Q8NGL7 312 aa10.97□□□□□ -0.65
LIMS1-205ENST00000410093 ISOC2Q96AB3 205 aa10.97□□□□□ -0.65
LIMS1-205ENST00000410093 C1orf159Q96HA4 380 aa10.97□□□□□ -0.65
LIMS1-205ENST00000410093 PARLQ9H300 379 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms