RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 CORO2AQ92828 525 aa12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 DNAJC4Q9NNZ3 241 aa12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 TMEM106BQ9NUM4 274 aa12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 POLR3KQ9Y2Y1 108 aaPredicted RBP12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 HNF1AP20823 631 aa12.4□□□□□ -0.42
SCAMP4-202ENST00000409472 REG1BP48304 166 aa12.4□□□□□ -0.42
SCAMP4-202ENST00000409472 DIAPH2-AS1Q14236 149 aa12.4□□□□□ -0.42
SCAMP4-202ENST00000409472 SVIPQ8NHG7 77 aa12.4□□□□□ -0.42
SCAMP4-202ENST00000409472 H1FXQ92522 213 aaKnown RBP12.4□□□□□ -0.42
SCAMP4-202ENST00000409472 SLC39A9Q9NUM3 307 aa12.4□□□□□ -0.42
SCAMP4-202ENST00000409472 LINC00312Q9Y6C7 94 aa12.4□□□□□ -0.42
SCAMP4-202ENST00000409472 COL6A6A6NMZ7 2263 aa12.4□□□□□ -0.43
SCAMP4-202ENST00000409472 PPIAL4EA0A075B759 164 aa12.4□□□□□ -0.43
SCAMP4-202ENST00000409472 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.4□□□□□ -0.43
SCAMP4-202ENST00000409472 hADV38S2A0JD32 116 aa12.4□□□□□ -0.43
SCAMP4-202ENST00000409472 FAM90A9PA6NNJ1 464 aa12.4□□□□□ -0.43
SCAMP4-202ENST00000409472 PPIAL4DF5H284 164 aa12.4□□□□□ -0.43
SCAMP4-202ENST00000409472 PPIAL4FP0DN26 164 aa12.4□□□□□ -0.43
SCAMP4-202ENST00000409472 THBS3P49746 956 aa12.4□□□□□ -0.43
SCAMP4-202ENST00000409472 LEMD1Q68G75 181 aa12.4□□□□□ -0.43
SCAMP4-202ENST00000409472 TMEM200BQ69YZ2 307 aa12.4□□□□□ -0.43
SCAMP4-202ENST00000409472 FAM122AQ96E09 287 aa12.4□□□□□ -0.43
SCAMP4-202ENST00000409472 C1orf159Q96HA4 380 aa12.4□□□□□ -0.43
SCAMP4-202ENST00000409472 NAGKQ9UJ70 344 aa12.4□□□□□ -0.43
SCAMP4-202ENST00000409472 WDR83OSQ9Y284 106 aa12.4□□□□□ -0.43
SCAMP4-202ENST00000409472 PPIAL4AQ9Y536 164 aa12.4□□□□□ -0.43
SCAMP4-202ENST00000409472 TRAV38-1A0A0B4J264 116 aa12.39□□□□□ -0.43
SCAMP4-202ENST00000409472 CD1BP29016 333 aa12.39□□□□□ -0.43
SCAMP4-202ENST00000409472 KIR2DS2P43631 304 aa12.39□□□□□ -0.43
SCAMP4-202ENST00000409472 DLX1P56177 255 aa12.39□□□□□ -0.43
SCAMP4-202ENST00000409472 RANP62826 216 aaKnown RBP12.39□□□□□ -0.43
SCAMP4-202ENST00000409472 PRB3Q04118 309 aaPredicted RBP12.39□□□□□ -0.43
SCAMP4-202ENST00000409472 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.39□□□□□ -0.43
SCAMP4-202ENST00000409472 FAM216AQ8WUB2 273 aa12.39□□□□□ -0.43
SCAMP4-202ENST00000409472 VKORC1Q9BQB6 163 aa12.39□□□□□ -0.43
SCAMP4-202ENST00000409472 MIEN1Q9BRT3 115 aa12.39□□□□□ -0.43
SCAMP4-202ENST00000409472 MRPL20Q9BYC9 149 aaKnown RBP12.39□□□□□ -0.43
SCAMP4-202ENST00000409472 MS4A5Q9H3V2 200 aa12.39□□□□□ -0.43
SCAMP4-202ENST00000409472 GSX1Q9H4S2 264 aaPredicted RBP12.39□□□□□ -0.43
SCAMP4-202ENST00000409472 DYNLRB1Q9NP97 96 aa12.39□□□□□ -0.43
SCAMP4-202ENST00000409472 C20orf202A1L168 122 aa12.38□□□□□ -0.43
SCAMP4-202ENST00000409472 LYNX1G3V0Z9 82 aa12.38□□□□□ -0.43
SCAMP4-202ENST00000409472 LYNX1P0DP58 116 aa12.38□□□□□ -0.43
SCAMP4-202ENST00000409472 TMPRSS3P57727 454 aa12.38□□□□□ -0.43
SCAMP4-202ENST00000409472 ACOT6Q3I5F7 207 aaPredicted RBP12.38□□□□□ -0.43
SCAMP4-202ENST00000409472 PDLIM3Q53GG5 364 aaPredicted RBP12.38□□□□□ -0.43
SCAMP4-202ENST00000409472 TREML4Q6UXN2 200 aa12.38□□□□□ -0.43
SCAMP4-202ENST00000409472 HINT2Q9BX68 163 aa12.38□□□□□ -0.43
SCAMP4-202ENST00000409472 ASH1LQ9NR48 2969 aaKnown RBP12.38□□□□□ -0.43
SCAMP4-202ENST00000409472 TMEM14BQ9NUH8 114 aa12.38□□□□□ -0.43
SCAMP4-202ENST00000409472 TMEM11P17152 192 aa12.38□□□□□ -0.43
SCAMP4-202ENST00000409472 TMEM241Q24JQ0 296 aa12.38□□□□□ -0.43
SCAMP4-202ENST00000409472 ETFRF1Q6IPR1 90 aa12.38□□□□□ -0.43
SCAMP4-202ENST00000409472 OR52E5Q8NH55 327 aa12.38□□□□□ -0.43
SCAMP4-202ENST00000409472 MGST2Q99735 147 aa12.38□□□□□ -0.43
SCAMP4-202ENST00000409472 CTXND1A0A1B0GTU2 59 aa12.37□□□□□ -0.43
SCAMP4-202ENST00000409472 TNFRSF13BO14836 293 aaPredicted RBP12.37□□□□□ -0.43
SCAMP4-202ENST00000409472 FAM3BP58499 235 aaPredicted RBP12.37□□□□□ -0.43
SCAMP4-202ENST00000409472 RBPJQ06330 500 aa12.37□□□□□ -0.43
SCAMP4-202ENST00000409472 C11orf42Q8N5U0 333 aa12.37□□□□□ -0.43
SCAMP4-202ENST00000409472 RNASE8Q8TDE3 154 aaKnown RBP12.37□□□□□ -0.43
SCAMP4-202ENST00000409472 ZNF714Q96N38 554 aa12.37□□□□□ -0.43
SCAMP4-202ENST00000409472 C20orf144Q9BQM9 153 aa12.37□□□□□ -0.43
SCAMP4-202ENST00000409472 FOXA2Q9Y261 457 aaPredicted RBP12.37□□□□□ -0.43
SCAMP4-202ENST00000409472 NAV3Q8IVL0 2385 aa12.37□□□□□ -0.43
SCAMP4-202ENST00000409472 PYGO2Q9BRQ0 406 aa12.37□□□□□ -0.43
SCAMP4-202ENST00000409472 PATZ1Q9HBE1 687 aaKnown RBP12.37□□□□□ -0.43
SCAMP4-202ENST00000409472 RAB9BQ9NP90 201 aa12.37□□□□□ -0.43
SCAMP4-202ENST00000409472 SLC35D1Q9NTN3 355 aa12.37□□□□□ -0.43
SCAMP4-202ENST00000409472 A0A1W2PN81 502 aa12.36□□□□□ -0.43
SCAMP4-202ENST00000409472 LOXP28300 417 aaPredicted RBP12.36□□□□□ -0.43
SCAMP4-202ENST00000409472 CHRNA7P36544 502 aa12.36□□□□□ -0.43
SCAMP4-202ENST00000409472 SMIM15Q7Z3B0 74 aa12.36□□□□□ -0.43
SCAMP4-202ENST00000409472 MOB3BQ86TA1 216 aa12.36□□□□□ -0.43
SCAMP4-202ENST00000409472 ZNF709Q8N972 641 aa12.36□□□□□ -0.43
SCAMP4-202ENST00000409472 ZNF705FA8MVS1 300 aaPredicted RBP12.36□□□□□ -0.43
SCAMP4-202ENST00000409472 CA2P00918 260 aa12.36□□□□□ -0.43
SCAMP4-202ENST00000409472 ZNF705DP0CH99 300 aaPredicted RBP12.36□□□□□ -0.43
SCAMP4-202ENST00000409472 ZNF705BP0CI00 300 aaPredicted RBP12.36□□□□□ -0.43
SCAMP4-202ENST00000409472 SELENOTP62341 195 aa12.36□□□□□ -0.43
SCAMP4-202ENST00000409472 MEF2BQ02080 365 aaPredicted RBP12.36□□□□□ -0.43
SCAMP4-202ENST00000409472 MIC13Q5XKP0 118 aa12.36□□□□□ -0.43
SCAMP4-202ENST00000409472 ZNF833PQ6ZTB9 187 aa12.36□□□□□ -0.43
SCAMP4-202ENST00000409472 GBGT1Q8N5D6 347 aa12.36□□□□□ -0.43
SCAMP4-202ENST00000409472 SSMEM1Q8WWF3 244 aa12.36□□□□□ -0.43
SCAMP4-202ENST00000409472 GGTLC1Q9BX51 225 aa12.36□□□□□ -0.43
SCAMP4-202ENST00000409472 OR51B2Q9Y5P1 312 aa12.36□□□□□ -0.43
SCAMP4-202ENST00000409472 SAA1P0DJI8 122 aaPredicted RBP12.35□□□□□ -0.43
SCAMP4-202ENST00000409472 BATFQ16520 125 aa12.35□□□□□ -0.43
SCAMP4-202ENST00000409472 WDR25Q64LD2 544 aaPredicted RBP12.35□□□□□ -0.43
SCAMP4-202ENST00000409472 SLC24A4Q8NFF2 622 aa12.35□□□□□ -0.43
SCAMP4-202ENST00000409472 SDF2L1Q9HCN8 221 aa12.35□□□□□ -0.43
SCAMP4-202ENST00000409472 CHTOPQ9Y3Y2 248 aaKnown RBP12.35□□□□□ -0.43
SCAMP4-202ENST00000409472 PLXNB1O43157 2135 aa12.35□□□□□ -0.43
SCAMP4-202ENST00000409472 CDC34P49427 236 aaPredicted RBP12.35□□□□□ -0.43
SCAMP4-202ENST00000409472 HSPE1P61604 102 aaKnown RBP12.35□□□□□ -0.43
SCAMP4-202ENST00000409472 CSMD1Q96PZ7 3565 aa12.34□□□□□ -0.43
SCAMP4-202ENST00000409472 K7EP13 123 aa12.34□□□□□ -0.43
SCAMP4-202ENST00000409472 NPY1RP25929 384 aa12.34□□□□□ -0.43
SCAMP4-202ENST00000409472 POU2AF1Q16633 256 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms