RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 CACNG8Q8WXS5 425 aa18.8■□□□□ 0.6
RABGGTA-202ENST00000399409 COMMD5Q9GZQ3 224 aa18.8■□□□□ 0.6
RABGGTA-202ENST00000399409 GAMTQ14353 236 aa18.79■□□□□ 0.6
RABGGTA-202ENST00000399409 JOSD1Q15040 202 aaPredicted RBP18.79■□□□□ 0.6
RABGGTA-202ENST00000399409 LINC00311Q8N616 119 aa18.79■□□□□ 0.6
RABGGTA-202ENST00000399409 ABHD17AQ96GS6 310 aa18.79■□□□□ 0.6
RABGGTA-202ENST00000399409 NDUFA4L2Q9NRX3 87 aa18.79■□□□□ 0.6
RABGGTA-202ENST00000399409 TRAPPC1Q9Y5R8 145 aa18.79■□□□□ 0.6
RABGGTA-202ENST00000399409 DSPP15924 2871 aaKnown RBP18.79■□□□□ 0.6
RABGGTA-202ENST00000399409 LOC400499M0QZD8 3231 aa18.79■□□□□ 0.6
RABGGTA-202ENST00000399409 NDUFB3O43676 98 aa18.79■□□□□ 0.6
RABGGTA-202ENST00000399409 USF1P22415 310 aaPredicted RBP18.79■□□□□ 0.6
RABGGTA-202ENST00000399409 GPX4P36969 197 aaPredicted RBP18.79■□□□□ 0.6
RABGGTA-202ENST00000399409 ERHP84090 104 aaKnown RBP18.79■□□□□ 0.6
RABGGTA-202ENST00000399409 CD69Q07108 199 aa18.79■□□□□ 0.6
RABGGTA-202ENST00000399409 FAM209BQ5JX69 171 aa18.79■□□□□ 0.6
RABGGTA-202ENST00000399409 PQLC2Q6ZP29 291 aa18.79■□□□□ 0.6
RABGGTA-202ENST00000399409 ASCL5Q7RTU5 278 aa18.79■□□□□ 0.6
RABGGTA-202ENST00000399409 PRSS33Q8NF86 280 aa18.79■□□□□ 0.6
RABGGTA-202ENST00000399409 ZNF596Q8TC21 504 aa18.79■□□□□ 0.6
RABGGTA-202ENST00000399409 FLYWCH2Q96CP2 140 aaKnown RBP18.79■□□□□ 0.6
RABGGTA-202ENST00000399409 DLL1O00548 723 aa18.78■□□□□ 0.6
RABGGTA-202ENST00000399409 CCL3L1P16619 93 aa18.78■□□□□ 0.6
RABGGTA-202ENST00000399409 OR10J1P30954 320 aa18.78■□□□□ 0.6
RABGGTA-202ENST00000399409 CNN1P51911 297 aaKnown RBP18.78■□□□□ 0.6
RABGGTA-202ENST00000399409 TAS2R45P59539 299 aa18.78■□□□□ 0.6
RABGGTA-202ENST00000399409 RPL8P62917 257 aaKnown RBP18.78■□□□□ 0.6
RABGGTA-202ENST00000399409 LRRC10Q5BKY1 277 aa18.78■□□□□ 0.6
RABGGTA-202ENST00000399409 GFRALQ6UXV0 394 aa18.78■□□□□ 0.6
RABGGTA-202ENST00000399409 VSTM2AQ8TAG5 236 aa18.78■□□□□ 0.6
RABGGTA-202ENST00000399409 A0A1W2PN81 502 aa18.77■□□□□ 0.6
RABGGTA-202ENST00000399409 TNFRSF13BO14836 293 aaPredicted RBP18.77■□□□□ 0.6
RABGGTA-202ENST00000399409 ACTL6BO94805 426 aa18.77■□□□□ 0.6
RABGGTA-202ENST00000399409 PSG5Q15238 335 aa18.77■□□□□ 0.6
RABGGTA-202ENST00000399409 PDPNQ86YL7 162 aa18.77■□□□□ 0.6
RABGGTA-202ENST00000399409 TMEM186Q96B77 213 aa18.77■□□□□ 0.6
RABGGTA-202ENST00000399409 TMEM106BQ9NUM4 274 aa18.77■□□□□ 0.6
RABGGTA-202ENST00000399409 GATCO43716 136 aaKnown RBP18.77■□□□□ 0.6
RABGGTA-202ENST00000399409 OR5G3P0C626 314 aa18.77■□□□□ 0.6
RABGGTA-202ENST00000399409 TMEM167AQ8TBQ9 72 aa18.77■□□□□ 0.6
RABGGTA-202ENST00000399409 ZNF835Q9Y2P0 537 aa18.77■□□□□ 0.6
RABGGTA-202ENST00000399409 PLCE1Q9P212 2302 aa18.77■□□□□ 0.59
RABGGTA-202ENST00000399409 IGKV1OR2-108A0A075B7D4 117 aa18.76■□□□□ 0.59
RABGGTA-202ENST00000399409 TRBV23-1A0A0A0MS06 115 aa18.76■□□□□ 0.59
RABGGTA-202ENST00000399409 PKIAP61925 76 aa18.76■□□□□ 0.59
RABGGTA-202ENST00000399409 OR4C13Q8NGP0 309 aa18.76■□□□□ 0.59
RABGGTA-202ENST00000399409 RNF2Q99496 336 aa18.76■□□□□ 0.59
RABGGTA-202ENST00000399409 LURAP1LQ8IV03 231 aa18.76■□□□□ 0.59
RABGGTA-202ENST00000399409 ZCCHC24Q8N2G6 241 aaKnown RBP18.76■□□□□ 0.59
RABGGTA-202ENST00000399409 OR10X1Q8NGY0 326 aa18.76■□□□□ 0.59
RABGGTA-202ENST00000399409 H1FXQ92522 213 aaKnown RBP18.76■□□□□ 0.59
RABGGTA-202ENST00000399409 TMEM18Q96B42 140 aa18.76■□□□□ 0.59
RABGGTA-202ENST00000399409 FAM122AQ96E09 287 aa18.76■□□□□ 0.59
RABGGTA-202ENST00000399409 IL36BQ9NZH7 164 aa18.76■□□□□ 0.59
RABGGTA-202ENST00000399409 YLPM1P49750 1951 aaKnown RBP18.76■□□□□ 0.59
RABGGTA-202ENST00000399409 SSX2Q16385 188 aa18.75■□□□□ 0.59
RABGGTA-202ENST00000399409 MOB3BQ86TA1 216 aa18.75■□□□□ 0.59
RABGGTA-202ENST00000399409 EAF1Q96JC9 268 aaPredicted RBP18.75■□□□□ 0.59
RABGGTA-202ENST00000399409 MRPL32Q9BYC8 188 aaKnown RBP18.75■□□□□ 0.59
RABGGTA-202ENST00000399409 NGBQ9NPG2 151 aa18.75■□□□□ 0.59
RABGGTA-202ENST00000399409 FCN3O75636 299 aa18.75■□□□□ 0.59
RABGGTA-202ENST00000399409 GCGP01275 180 aa18.75■□□□□ 0.59
RABGGTA-202ENST00000399409 RD3LP0DJH9 198 aa18.75■□□□□ 0.59
RABGGTA-202ENST00000399409 NBL1P41271 181 aa18.75■□□□□ 0.59
RABGGTA-202ENST00000399409 YPEL3P61236 119 aaPredicted RBP18.75■□□□□ 0.59
RABGGTA-202ENST00000399409 C9orf152Q5JTZ5 239 aa18.75■□□□□ 0.59
RABGGTA-202ENST00000399409 OR10W1Q8NGF6 305 aa18.75■□□□□ 0.59
RABGGTA-202ENST00000399409 CHRNB4P30926 498 aa18.74■□□□□ 0.59
RABGGTA-202ENST00000399409 Q8NA96 180 aa18.74■□□□□ 0.59
RABGGTA-202ENST00000399409 CCL17Q92583 94 aa18.74■□□□□ 0.59
RABGGTA-202ENST00000399409 K7EN84 100 aa18.74■□□□□ 0.59
RABGGTA-202ENST00000399409 KAAG1Q9UBP8 84 aa18.74■□□□□ 0.59
RABGGTA-202ENST00000399409 TSTD3H0UI37 97 aa18.73■□□□□ 0.59
RABGGTA-202ENST00000399409 HNF1AP20823 631 aa18.73■□□□□ 0.59
RABGGTA-202ENST00000399409 HLA-DRB5Q30154 266 aa18.73■□□□□ 0.59
RABGGTA-202ENST00000399409 OR9G1Q8NH87 305 aa18.73■□□□□ 0.59
RABGGTA-202ENST00000399409 RNASE6Q93091 150 aaKnown RBP18.73■□□□□ 0.59
RABGGTA-202ENST00000399409 WASHC3Q9Y3C0 194 aa18.73■□□□□ 0.59
RABGGTA-202ENST00000399409 ICE1Q9Y2F5 2266 aa18.73■□□□□ 0.59
RABGGTA-202ENST00000399409 C8orf88P0DMB2 117 aa18.72■□□□□ 0.59
RABGGTA-202ENST00000399409 GZMBP10144 247 aa18.72■□□□□ 0.59
RABGGTA-202ENST00000399409 ZNF137PP52743 207 aa18.72■□□□□ 0.59
RABGGTA-202ENST00000399409 DEFA6Q01524 100 aa18.72■□□□□ 0.59
RABGGTA-202ENST00000399409 ZNF90Q03938 601 aa18.72■□□□□ 0.59
RABGGTA-202ENST00000399409 LYPD2Q6UXB3 125 aa18.72■□□□□ 0.59
RABGGTA-202ENST00000399409 HELTA6NFD8 242 aa18.72■□□□□ 0.59
RABGGTA-202ENST00000399409 OR7C2O60412 319 aa18.72■□□□□ 0.59
RABGGTA-202ENST00000399409 SUB1P53999 127 aaKnown RBP eCLIP18.72■□□□□ 0.59
RABGGTA-202ENST00000399409 ST6GALNAC6Q969X2 333 aa18.72■□□□□ 0.59
RABGGTA-202ENST00000399409 ZNF503Q96F45 646 aa18.72■□□□□ 0.59
RABGGTA-202ENST00000399409 CUL9Q8IWT3 2517 aa18.71■□□□□ 0.59
RABGGTA-202ENST00000399409 A0A087X0M5 115 aa18.71■□□□□ 0.59
RABGGTA-202ENST00000399409 A0A1B0GX30 115 aa18.71■□□□□ 0.59
RABGGTA-202ENST00000399409 A0A1W2PRE2 83 aa18.71■□□□□ 0.59
RABGGTA-202ENST00000399409 REG1BP48304 166 aa18.71■□□□□ 0.59
RABGGTA-202ENST00000399409 GNG4P50150 75 aa18.71■□□□□ 0.59
RABGGTA-202ENST00000399409 GBGT1Q8N5D6 347 aa18.71■□□□□ 0.59
RABGGTA-202ENST00000399409 SLC25A33Q9BSK2 321 aa18.71■□□□□ 0.59
RABGGTA-202ENST00000399409 SH3BGRL2Q9UJC5 107 aa18.71■□□□□ 0.59
RABGGTA-202ENST00000399409 DLX6P56179 175 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms