RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 EFNA2O43921 213 aa9.7□□□□□ -0.86
PCDHGA8-201ENST00000398604 HSPB9Q9BQS6 159 aa9.7□□□□□ -0.86
PCDHGA8-201ENST00000398604 MRPL20Q9BYC9 149 aaKnown RBP9.7□□□□□ -0.86
PCDHGA8-201ENST00000398604 OBSL1O75147 1896 aa9.7□□□□□ -0.86
PCDHGA8-201ENST00000398604 NTN3O00634 580 aaPredicted RBP9.7□□□□□ -0.86
PCDHGA8-201ENST00000398604 IGHMP01871 453 aa9.7□□□□□ -0.86
PCDHGA8-201ENST00000398604 MEOX2P50222 304 aa9.7□□□□□ -0.86
PCDHGA8-201ENST00000398604 RELQ04864 619 aaPredicted RBP9.7□□□□□ -0.86
PCDHGA8-201ENST00000398604 PSMB11A5LHX3 300 aa9.7□□□□□ -0.86
PCDHGA8-201ENST00000398604 ACAA1P09110 424 aaPredicted RBP9.7□□□□□ -0.86
PCDHGA8-201ENST00000398604 MRPL13Q9BYD1 178 aaKnown RBP9.7□□□□□ -0.86
PCDHGA8-201ENST00000398604 SPRR3Q9UBC9 169 aa9.7□□□□□ -0.86
PCDHGA8-201ENST00000398604 NAV2Q8IVL1 2488 aa9.7□□□□□ -0.86
PCDHGA8-201ENST00000398604 LOC102723996A0A087X1L8 192 aa9.7□□□□□ -0.86
PCDHGA8-201ENST00000398604 DIRC3C9JPN6 131 aa9.7□□□□□ -0.86
PCDHGA8-201ENST00000398604 HTN3P15516 51 aa9.7□□□□□ -0.86
PCDHGA8-201ENST00000398604 ANOS1P23352 680 aa9.7□□□□□ -0.86
PCDHGA8-201ENST00000398604 LINC00305Q7Z4B0 112 aa9.7□□□□□ -0.86
PCDHGA8-201ENST00000398604 PLPPR1Q8TBJ4 325 aa9.7□□□□□ -0.86
PCDHGA8-201ENST00000398604 C1QTNF5Q9BXJ0 243 aa9.7□□□□□ -0.86
PCDHGA8-201ENST00000398604 LOC105371267A0A1B0GV96 52 aa9.69□□□□□ -0.86
PCDHGA8-201ENST00000398604 ITLN2Q8WWU7 325 aaPredicted RBP9.69□□□□□ -0.86
PCDHGA8-201ENST00000398604 YLPM1P49750 1951 aaKnown RBP9.69□□□□□ -0.86
PCDHGA8-201ENST00000398604 ZNF462Q96JM2 2506 aa9.69□□□□□ -0.86
PCDHGA8-201ENST00000398604 IGKV1-9A0A0C4DH69 117 aa9.69□□□□□ -0.86
PCDHGA8-201ENST00000398604 KBTBD11-OT1A0A1B0GTJ5 212 aa9.69□□□□□ -0.86
PCDHGA8-201ENST00000398604 M0R381 172 aa9.69□□□□□ -0.86
PCDHGA8-201ENST00000398604 OR4A47Q6IF82 309 aa9.69□□□□□ -0.86
PCDHGA8-201ENST00000398604 ATRAIDQ6UW56 229 aa9.69□□□□□ -0.86
PCDHGA8-201ENST00000398604 RAX2Q96IS3 184 aa9.69□□□□□ -0.86
PCDHGA8-201ENST00000398604 ZNF98A6NK75 572 aa9.69□□□□□ -0.86
PCDHGA8-201ENST00000398604 IGFBP2P18065 325 aa9.69□□□□□ -0.86
PCDHGA8-201ENST00000398604 CLEC19AQ6UXS0 136 aa9.69□□□□□ -0.86
PCDHGA8-201ENST00000398604 LINC00114Q6XXX2 140 aa9.69□□□□□ -0.86
PCDHGA8-201ENST00000398604 GFI1Q99684 422 aa9.69□□□□□ -0.86
PCDHGA8-201ENST00000398604 NBEAP1P0C6P0 100 aa9.68□□□□□ -0.86
PCDHGA8-201ENST00000398604 AQP10Q96PS8 301 aa9.68□□□□□ -0.86
PCDHGA8-201ENST00000398604 FAM90A26D6RGX4 464 aa9.68□□□□□ -0.86
PCDHGA8-201ENST00000398604 H3BVH4 76 aa9.68□□□□□ -0.86
PCDHGA8-201ENST00000398604 LY6HO94772 140 aa9.68□□□□□ -0.86
PCDHGA8-201ENST00000398604 ZNF25P17030 456 aaPredicted RBP9.68□□□□□ -0.86
PCDHGA8-201ENST00000398604 C19orf54Q5BKX5 351 aa9.68□□□□□ -0.86
PCDHGA8-201ENST00000398604 POC1AQ8NBT0 407 aa9.68□□□□□ -0.86
PCDHGA8-201ENST00000398604 RNASE6Q93091 150 aaKnown RBP9.68□□□□□ -0.86
PCDHGA8-201ENST00000398604 PARLQ9H300 379 aa9.68□□□□□ -0.86
PCDHGA8-201ENST00000398604 GRIFINA4D1Z8 144 aa9.68□□□□□ -0.86
PCDHGA8-201ENST00000398604 CD74P04233 296 aa9.68□□□□□ -0.86
PCDHGA8-201ENST00000398604 MST1P26927 711 aa9.68□□□□□ -0.86
PCDHGA8-201ENST00000398604 GATAD1Q8WUU5 269 aa9.68□□□□□ -0.86
PCDHGA8-201ENST00000398604 EEF1AKMT3Q96AZ1 226 aa9.68□□□□□ -0.86
PCDHGA8-201ENST00000398604 IGKV1D-13A0A0B4J2D9 117 aa9.68□□□□□ -0.86
PCDHGA8-201ENST00000398604 IGKV1-13P0DP09 117 aa9.68□□□□□ -0.86
PCDHGA8-201ENST00000398604 TUBA4BQ9H853 241 aa9.68□□□□□ -0.86
PCDHGA8-201ENST00000398604 NPIPB6E9PJ23 425 aa9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 J3QW42 95 aa9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 CGAP01215 116 aa9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 CD99P14209 185 aa9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 AGAP20933 346 aa9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 COMPP49747 757 aaPredicted RBP9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 ZNF56Q15929 161 aa9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 FAM53AQ6NSI3 398 aaPredicted RBP9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 ELOVL1Q9BW60 279 aa9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 C21orf62Q9NYP8 219 aa9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 HSPB8Q9UJY1 196 aa9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 TRAV30A0A087WSZ9 112 aa9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 NPIPB7O75200 414 aa9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 ZNF383Q8NA42 475 aa9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 SPSB4Q96A44 273 aa9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 DENND4CQ5VZ89 1909 aa9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 FAM159AQ6UWV7 190 aa9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 GLMPQ8WWB7 406 aa9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 NEU4Q8WWR8 484 aaPredicted RBP9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 RCC1LQ96I51 464 aaKnown RBP9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 SMIM8Q96KF7 97 aa9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 TGIF2-C20orf24A0A0A6YYL0 155 aa9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 TRAV24A0A0B4J272 114 aa9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 SRIP30626 198 aa9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 UCP3P55916 312 aa9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 OSR1Q8TAX0 266 aaPredicted RBP9.67□□□□□ -0.86
PCDHGA8-201ENST00000398604 NUP210Q8TEM1 1887 aaPredicted RBP9.66□□□□□ -0.86
PCDHGA8-201ENST00000398604 CHD7Q9P2D1 2997 aa9.66□□□□□ -0.86
PCDHGA8-201ENST00000398604 RNASE1P07998 156 aaKnown RBP9.66□□□□□ -0.86
PCDHGA8-201ENST00000398604 UQCRFS1P47985 274 aa9.66□□□□□ -0.86
PCDHGA8-201ENST00000398604 SNRPD3P62318 126 aaKnown RBP9.66□□□□□ -0.86
PCDHGA8-201ENST00000398604 TFF3Q07654 80 aa9.66□□□□□ -0.86
PCDHGA8-201ENST00000398604 ZNF146Q15072 292 aa9.66□□□□□ -0.86
PCDHGA8-201ENST00000398604 PPP1R27Q86WC6 154 aa9.66□□□□□ -0.86
PCDHGA8-201ENST00000398604 ATOH7Q8N100 152 aa9.66□□□□□ -0.86
PCDHGA8-201ENST00000398604 C1orf162Q8NEQ5 155 aaPredicted RBP9.66□□□□□ -0.86
PCDHGA8-201ENST00000398604 E9PQ18 207 aa9.66□□□□□ -0.86
PCDHGA8-201ENST00000398604 NUDT3O95989 172 aa9.66□□□□□ -0.86
PCDHGA8-201ENST00000398604 GCHFRP30047 84 aa9.66□□□□□ -0.86
PCDHGA8-201ENST00000398604 LEMD1Q68G75 181 aa9.66□□□□□ -0.86
PCDHGA8-201ENST00000398604 PRR14LQ5THK1 2151 aa9.66□□□□□ -0.86
PCDHGA8-201ENST00000398604 NACAE9PAV3 2078 aa9.66□□□□□ -0.86
PCDHGA8-201ENST00000398604 TMEM262E9PQX1 116 aa9.66□□□□□ -0.86
PCDHGA8-201ENST00000398604 M0R143 59 aa9.66□□□□□ -0.86
PCDHGA8-201ENST00000398604 IL6RP08887 468 aaPredicted RBP9.66□□□□□ -0.86
PCDHGA8-201ENST00000398604 GPR61Q9BZJ8 451 aa9.66□□□□□ -0.86
PCDHGA8-201ENST00000398604 IFI27L2Q9H2X8 130 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms