RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 CBX5P45973 191 aa8.74□□□□□ -1.01
SYNE4-203ENST00000397428 TCTAP57738 103 aa8.74□□□□□ -1.01
SYNE4-203ENST00000397428 GABARAPL2P60520 117 aa8.74□□□□□ -1.01
SYNE4-203ENST00000397428 PRR20EP86478 221 aa8.74□□□□□ -1.01
SYNE4-203ENST00000397428 PRR20CP86479 221 aa8.74□□□□□ -1.01
SYNE4-203ENST00000397428 PRR20DP86480 221 aa8.74□□□□□ -1.01
SYNE4-203ENST00000397428 PRR20BP86481 221 aa8.74□□□□□ -1.01
SYNE4-203ENST00000397428 PRR20AP86496 221 aa8.74□□□□□ -1.01
SYNE4-203ENST00000397428 AADACL3Q5VUY0 350 aa8.74□□□□□ -1.01
SYNE4-203ENST00000397428 TMEM116Q8NCL8 245 aa8.74□□□□□ -1.01
SYNE4-203ENST00000397428 OR11H2Q8NH07 326 aa8.74□□□□□ -1.01
SYNE4-203ENST00000397428 FCAMRQ8WWV6 532 aa8.74□□□□□ -1.01
SYNE4-203ENST00000397428 TXN2Q99757 166 aa8.74□□□□□ -1.01
SYNE4-203ENST00000397428 MFFQ9GZY8 342 aa8.74□□□□□ -1.01
SYNE4-203ENST00000397428 C11orf68Q9H3H3 251 aaKnown RBP8.74□□□□□ -1.01
SYNE4-203ENST00000397428 DIABLOQ9NR28 239 aa8.74□□□□□ -1.01
SYNE4-203ENST00000397428 OR51B2Q9Y5P1 312 aa8.74□□□□□ -1.01
SYNE4-203ENST00000397428 TRAV14DV4A0A0A6YYC5 116 aa8.73□□□□□ -1.01
SYNE4-203ENST00000397428 I3L2K1 104 aa8.73□□□□□ -1.01
SYNE4-203ENST00000397428 SNAPC5O75971 98 aa8.73□□□□□ -1.01
SYNE4-203ENST00000397428 IFNA4P05014 189 aa8.73□□□□□ -1.01
SYNE4-203ENST00000397428 FCER2P06734 321 aa8.73□□□□□ -1.01
SYNE4-203ENST00000397428 NANOS2P60321 138 aaKnown RBP8.73□□□□□ -1.01
SYNE4-203ENST00000397428 ERVK-16P61578 105 aa8.73□□□□□ -1.01
SYNE4-203ENST00000397428 RELQ04864 619 aaPredicted RBP8.73□□□□□ -1.01
SYNE4-203ENST00000397428 Q56UQ5 140 aa8.73□□□□□ -1.01
SYNE4-203ENST00000397428 IDNKQ5T6J7 187 aa8.73□□□□□ -1.01
SYNE4-203ENST00000397428 IZUMO2Q6UXV1 221 aa8.73□□□□□ -1.01
SYNE4-203ENST00000397428 OR1P1Q8NH06 330 aa8.73□□□□□ -1.01
SYNE4-203ENST00000397428 FCGR1BQ92637 280 aa8.73□□□□□ -1.01
SYNE4-203ENST00000397428 MOB3AQ96BX8 217 aa8.73□□□□□ -1.01
SYNE4-203ENST00000397428 TMEM56Q96MV1 263 aa8.73□□□□□ -1.01
SYNE4-203ENST00000397428 HINT2Q9BX68 163 aa8.73□□□□□ -1.01
SYNE4-203ENST00000397428 NXF2Q9GZY0 626 aaKnown RBP8.73□□□□□ -1.01
SYNE4-203ENST00000397428 VCX3BQ9H321 246 aa8.73□□□□□ -1.01
SYNE4-203ENST00000397428 TMEM14BQ9NUH8 114 aa8.73□□□□□ -1.01
SYNE4-203ENST00000397428 FKBP11Q9NYL4 201 aa8.73□□□□□ -1.01
SYNE4-203ENST00000397428 RAB26Q9ULW5 256 aa8.73□□□□□ -1.01
SYNE4-203ENST00000397428 NSG2Q9Y328 171 aa8.73□□□□□ -1.01
SYNE4-203ENST00000397428 DBX1A6NMT0 343 aa8.72□□□□□ -1.01
SYNE4-203ENST00000397428 TMEM127O75204 238 aa8.72□□□□□ -1.01
SYNE4-203ENST00000397428 NAT1P18440 290 aa8.72□□□□□ -1.01
SYNE4-203ENST00000397428 PSMB9P28065 219 aa8.72□□□□□ -1.01
SYNE4-203ENST00000397428 G6PCP35575 357 aa8.72□□□□□ -1.01
SYNE4-203ENST00000397428 RFX2P48378 723 aa8.72□□□□□ -1.01
SYNE4-203ENST00000397428 MFAP4P55083 255 aa8.72□□□□□ -1.01
SYNE4-203ENST00000397428 HERV-K104P61576 105 aa8.72□□□□□ -1.01
SYNE4-203ENST00000397428 MXD1Q05195 221 aa8.72□□□□□ -1.01
SYNE4-203ENST00000397428 RBMS2Q15434 407 aaKnown RBP8.72□□□□□ -1.01
SYNE4-203ENST00000397428 TMEM17Q86X19 198 aa8.72□□□□□ -1.01
SYNE4-203ENST00000397428 UBAC2Q8NBM4 344 aa8.72□□□□□ -1.01
SYNE4-203ENST00000397428 C2CD4CQ8TF44 421 aa8.72□□□□□ -1.01
SYNE4-203ENST00000397428 SLC25A46Q96AG3 418 aa8.72□□□□□ -1.01
SYNE4-203ENST00000397428 FAM212BQ9NTI7 297 aaPredicted RBP8.72□□□□□ -1.01
SYNE4-203ENST00000397428 PRNDQ9UKY0 176 aa8.72□□□□□ -1.01
SYNE4-203ENST00000397428 APLNQ9ULZ1 77 aa8.72□□□□□ -1.01
SYNE4-203ENST00000397428 IGHV3-49A0A0A0MS15 119 aa8.71□□□□□ -1.02
SYNE4-203ENST00000397428 NUPL2O15504 423 aaKnown RBP8.71□□□□□ -1.02
SYNE4-203ENST00000397428 XRCC3O43542 346 aa8.71□□□□□ -1.02
SYNE4-203ENST00000397428 RLN1P04808 185 aa8.71□□□□□ -1.02
SYNE4-203ENST00000397428 CD5P06127 495 aa8.71□□□□□ -1.02
SYNE4-203ENST00000397428 TFPI2P48307 235 aa8.71□□□□□ -1.02
SYNE4-203ENST00000397428 LYSMD2Q8IV50 215 aa8.71□□□□□ -1.02
SYNE4-203ENST00000397428 LILRB2Q8N423 598 aa8.71□□□□□ -1.02
SYNE4-203ENST00000397428 YTHDF1Q9BYJ9 559 aaKnown RBP8.71□□□□□ -1.02
SYNE4-203ENST00000397428 RNF167Q9H6Y7 350 aa8.71□□□□□ -1.02
SYNE4-203ENST00000397428 VSIRQ9H7M9 311 aa8.71□□□□□ -1.02
SYNE4-203ENST00000397428 EHFQ9NZC4 300 aa8.71□□□□□ -1.02
SYNE4-203ENST00000397428 FBXL17Q9UF56 701 aa8.71□□□□□ -1.02
SYNE4-203ENST00000397428 ANAPC10Q9UM13 185 aa8.71□□□□□ -1.02
SYNE4-203ENST00000397428 DNAH10Q8IVF4 4471 aa8.7□□□□□ -1.02
SYNE4-203ENST00000397428 MEIS3P1A6NDR6 274 aa8.7□□□□□ -1.02
SYNE4-203ENST00000397428 C15orf61A6NNL5 157 aa8.7□□□□□ -1.02
SYNE4-203ENST00000397428 DFFBO76075 338 aa8.7□□□□□ -1.02
SYNE4-203ENST00000397428 YIF1AO95070 293 aa8.7□□□□□ -1.02
SYNE4-203ENST00000397428 PAFAH1B2P68402 229 aa8.7□□□□□ -1.02
SYNE4-203ENST00000397428 TMEM187Q14656 261 aa8.7□□□□□ -1.02
SYNE4-203ENST00000397428 TCF24Q7RTU0 167 aa8.7□□□□□ -1.02
SYNE4-203ENST00000397428 CMTM1Q8IZ96 169 aa8.7□□□□□ -1.02
SYNE4-203ENST00000397428 GBGT1Q8N5D6 347 aa8.7□□□□□ -1.02
SYNE4-203ENST00000397428 ZNF114Q8NC26 417 aa8.7□□□□□ -1.02
SYNE4-203ENST00000397428 S100A16Q96FQ6 103 aaKnown RBP8.7□□□□□ -1.02
SYNE4-203ENST00000397428 CMTM3Q96MX0 182 aa8.7□□□□□ -1.02
SYNE4-203ENST00000397428 ZNF2Q9BSG1 426 aaPredicted RBP8.7□□□□□ -1.02
SYNE4-203ENST00000397428 KMT2AQ03164 3969 aa8.7□□□□□ -1.02
SYNE4-203ENST00000397428 VPS13DQ5THJ4 4388 aa8.69□□□□□ -1.02
SYNE4-203ENST00000397428 TRAV2A0A0B4J234 112 aa8.69□□□□□ -1.02
SYNE4-203ENST00000397428 DEFB4AO15263 64 aa8.69□□□□□ -1.02
SYNE4-203ENST00000397428 PMP2P02689 132 aa8.69□□□□□ -1.02
SYNE4-203ENST00000397428 APOHP02749 345 aaPredicted RBP8.69□□□□□ -1.02
SYNE4-203ENST00000397428 TOMM20LQ6UXN7 152 aa8.69□□□□□ -1.02
SYNE4-203ENST00000397428 DUSP18Q8NEJ0 188 aa8.69□□□□□ -1.02
SYNE4-203ENST00000397428 OR6F1Q8NGZ6 308 aa8.69□□□□□ -1.02
SYNE4-203ENST00000397428 SEC22AQ96IW7 307 aa8.69□□□□□ -1.02
SYNE4-203ENST00000397428 TSC22D3Q99576 134 aa8.69□□□□□ -1.02
SYNE4-203ENST00000397428 HRH4Q9H3N8 390 aa8.69□□□□□ -1.02
SYNE4-203ENST00000397428 IFT46Q9NQC8 304 aa8.69□□□□□ -1.02
SYNE4-203ENST00000397428 PCLOQ9Y6V0 5065 aa8.68□□□□□ -1.02
SYNE4-203ENST00000397428 IGKV3-7A0A075B6H7 116 aa8.68□□□□□ -1.02
SYNE4-203ENST00000397428 IGHV3OR16-13A0A075B7E8 117 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms